RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 XCL2Q9UBD3 114 aa21.97■■□□□ 1.11
SSSCA1-207ENST00000533115 IGHV4-28A0A0C4DH34 117 aa21.96■■□□□ 1.11
SSSCA1-207ENST00000533115 BCAP31P51572 246 aa21.96■■□□□ 1.11
SSSCA1-207ENST00000533115 SLC38A11Q08AI6 406 aa21.96■■□□□ 1.11
SSSCA1-207ENST00000533115 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa21.96■■□□□ 1.11
SSSCA1-207ENST00000533115 ENKURQ8TC29 256 aa21.96■■□□□ 1.11
SSSCA1-207ENST00000533115 C11orf1Q9H5F2 150 aa21.96■■□□□ 1.11
SSSCA1-207ENST00000533115 IGKV3-20P01619 116 aa21.95■■□□□ 1.1
SSSCA1-207ENST00000533115 OR5G3P0C626 314 aa21.95■■□□□ 1.1
SSSCA1-207ENST00000533115 RBMY1A1P0DJD3 496 aaKnown RBP21.95■■□□□ 1.1
SSSCA1-207ENST00000533115 RBMY1CP0DJD4 496 aa21.95■■□□□ 1.1
SSSCA1-207ENST00000533115 RBMY1FQ15415 496 aaKnown RBP21.95■■□□□ 1.1
SSSCA1-207ENST00000533115 SPATA31B1PQ5VZV4 182 aa21.95■■□□□ 1.1
SSSCA1-207ENST00000533115 CAV2P51636 162 aa21.94■■□□□ 1.1
SSSCA1-207ENST00000533115 IFITM3Q01628 133 aa21.94■■□□□ 1.1
SSSCA1-207ENST00000533115 C20orf173Q96LM9 149 aa21.94■■□□□ 1.1
SSSCA1-207ENST00000533115 CLUHP3Q96NS8 147 aa21.94■■□□□ 1.1
SSSCA1-207ENST00000533115 ARL6Q9H0F7 186 aa21.94■■□□□ 1.1
SSSCA1-207ENST00000533115 RPRMQ9NS64 109 aa21.94■■□□□ 1.1
SSSCA1-207ENST00000533115 PVALBP20472 110 aaPredicted RBP21.93■■□□□ 1.1
SSSCA1-207ENST00000533115 IL15RAQ13261 267 aa21.93■■□□□ 1.1
SSSCA1-207ENST00000533115 EBLN2Q6P2I7 272 aa21.93■■□□□ 1.1
SSSCA1-207ENST00000533115 S100A7AQ86SG5 101 aa21.93■■□□□ 1.1
SSSCA1-207ENST00000533115 ZNF546Q86UE3 836 aa21.93■■□□□ 1.1
SSSCA1-207ENST00000533115 OR4B1Q8NGF8 309 aa21.93■■□□□ 1.1
SSSCA1-207ENST00000533115 F6UB75 175 aa21.92■■□□□ 1.1
SSSCA1-207ENST00000533115 GOSR2O14653 212 aa21.92■■□□□ 1.1
SSSCA1-207ENST00000533115 AGPAT2O15120 278 aa21.92■■□□□ 1.1
SSSCA1-207ENST00000533115 S100A10P60903 97 aa21.92■■□□□ 1.1
SSSCA1-207ENST00000533115 PATE2Q6UY27 113 aa21.92■■□□□ 1.1
SSSCA1-207ENST00000533115 UHRF2Q96PU4 802 aa21.92■■□□□ 1.1
SSSCA1-207ENST00000533115 GPN1Q9HCN4 374 aaPredicted RBP21.92■■□□□ 1.1
SSSCA1-207ENST00000533115 A0A0J9YX75 114 aa21.91■■□□□ 1.1
SSSCA1-207ENST00000533115 FAM24AA6NFZ4 105 aa21.91■■□□□ 1.1
SSSCA1-207ENST00000533115 RPL7P18124 248 aaKnown RBP21.91■■□□□ 1.1
SSSCA1-207ENST00000533115 PXDC1Q5TGL8 231 aa21.91■■□□□ 1.1
SSSCA1-207ENST00000533115 LINC00476Q8WZB0 136 aa21.91■■□□□ 1.1
SSSCA1-207ENST00000533115 HRH4Q9H3N8 390 aa21.91■■□□□ 1.1
SSSCA1-207ENST00000533115 CST7O76096 145 aa21.9■■□□□ 1.1
SSSCA1-207ENST00000533115 FXYD7P58549 80 aa21.9■■□□□ 1.1
SSSCA1-207ENST00000533115 RAB32Q13637 225 aa21.9■■□□□ 1.1
SSSCA1-207ENST00000533115 FAM78BQ5VT40 261 aa21.9■■□□□ 1.1
SSSCA1-207ENST00000533115 MGST2Q99735 147 aa21.9■■□□□ 1.1
SSSCA1-207ENST00000533115 ARV1Q9H2C2 271 aa21.9■■□□□ 1.1
SSSCA1-207ENST00000533115 ELOA3CA0A087WX78 387 aaPredicted RBP21.89■■□□□ 1.09
SSSCA1-207ENST00000533115 FGL1Q08830 312 aa21.89■■□□□ 1.09
SSSCA1-207ENST00000533115 ZNF709Q8N972 641 aa21.89■■□□□ 1.09
SSSCA1-207ENST00000533115 LYRM2Q9NU23 88 aaPredicted RBP21.89■■□□□ 1.09
SSSCA1-207ENST00000533115 PSG9Q00887 426 aa21.88■■□□□ 1.09
SSSCA1-207ENST00000533115 NRARPQ7Z6K4 114 aa21.88■■□□□ 1.09
SSSCA1-207ENST00000533115 RNF24Q9Y225 148 aa21.88■■□□□ 1.09
SSSCA1-207ENST00000533115 TRAV8-2A0A0B4J237 113 aa21.87■■□□□ 1.09
SSSCA1-207ENST00000533115 IGFL4Q6B9Z1 124 aa21.87■■□□□ 1.09
SSSCA1-207ENST00000533115 BATF3Q9NR55 127 aa21.87■■□□□ 1.09
SSSCA1-207ENST00000533115 SULT1A1P50225 295 aa21.86■■□□□ 1.09
SSSCA1-207ENST00000533115 ZNF705AQ6ZN79 300 aaPredicted RBP21.86■■□□□ 1.09
SSSCA1-207ENST00000533115 SLC35B3Q9H1N7 401 aa21.86■■□□□ 1.09
SSSCA1-207ENST00000533115 UQCC1Q9NVA1 299 aa21.86■■□□□ 1.09
SSSCA1-207ENST00000533115 A0A087X0K7 114 aa21.85■■□□□ 1.09
SSSCA1-207ENST00000533115 IGSF23A1L1A6 192 aa21.85■■□□□ 1.09
SSSCA1-207ENST00000533115 PRAF2O60831 178 aa21.85■■□□□ 1.09
SSSCA1-207ENST00000533115 LY6G6CO95867 125 aa21.85■■□□□ 1.09
SSSCA1-207ENST00000533115 CAMLGP49069 296 aa21.85■■□□□ 1.09
SSSCA1-207ENST00000533115 RAB31Q13636 194 aa21.85■■□□□ 1.09
SSSCA1-207ENST00000533115 LINC00305Q7Z4B0 112 aa21.85■■□□□ 1.09
SSSCA1-207ENST00000533115 RNF182Q8N6D2 247 aa21.85■■□□□ 1.09
SSSCA1-207ENST00000533115 TMEM252Q8N6L7 170 aa21.85■■□□□ 1.09
SSSCA1-207ENST00000533115 INMT-MINDY4F8WBC2 141 aa21.84■■□□□ 1.09
SSSCA1-207ENST00000533115 S100A11P31949 105 aa21.84■■□□□ 1.09
SSSCA1-207ENST00000533115 VWC2Q2TAL6 325 aa21.84■■□□□ 1.09
SSSCA1-207ENST00000533115 STX12Q86Y82 276 aa21.84■■□□□ 1.09
SSSCA1-207ENST00000533115 NEU1Q99519 415 aa21.84■■□□□ 1.09
SSSCA1-207ENST00000533115 WDR83OSQ9Y284 106 aa21.84■■□□□ 1.09
SSSCA1-207ENST00000533115 A8MTW9 85 aa21.83■■□□□ 1.09
SSSCA1-207ENST00000533115 ZNF705FA8MVS1 300 aaPredicted RBP21.83■■□□□ 1.09
SSSCA1-207ENST00000533115 COX7A2P2O60397 106 aa21.83■■□□□ 1.09
SSSCA1-207ENST00000533115 ZNF705DP0CH99 300 aaPredicted RBP21.83■■□□□ 1.09
SSSCA1-207ENST00000533115 ZNF705BP0CI00 300 aaPredicted RBP21.83■■□□□ 1.09
SSSCA1-207ENST00000533115 HLA-DMBP28068 263 aa21.83■■□□□ 1.09
SSSCA1-207ENST00000533115 C11orf94C9JXX5 98 aa21.82■■□□□ 1.08
SSSCA1-207ENST00000533115 MRPS12O15235 138 aaKnown RBP21.82■■□□□ 1.08
SSSCA1-207ENST00000533115 SIX6O95475 246 aa21.82■■□□□ 1.08
SSSCA1-207ENST00000533115 HBG1P69891 147 aa21.82■■□□□ 1.08
SSSCA1-207ENST00000533115 HBG2P69892 147 aa21.82■■□□□ 1.08
SSSCA1-207ENST00000533115 C2CD4CQ8TF44 421 aa21.82■■□□□ 1.08
SSSCA1-207ENST00000533115 TMEM37Q8WXS4 190 aa21.82■■□□□ 1.08
SSSCA1-207ENST00000533115 DUSP14O95147 198 aaKnown RBP21.81■■□□□ 1.08
SSSCA1-207ENST00000533115 DEFA1P59665 94 aa21.81■■□□□ 1.08
SSSCA1-207ENST00000533115 DEFA3P59666 94 aa21.81■■□□□ 1.08
SSSCA1-207ENST00000533115 MARVELD1Q9BSK0 173 aa21.81■■□□□ 1.08
SSSCA1-207ENST00000533115 IGHV3OR16-12A0A075B7B8 117 aa21.8■■□□□ 1.08
SSSCA1-207ENST00000533115 SMIM9A6NGZ8 99 aa21.8■■□□□ 1.08
SSSCA1-207ENST00000533115 C10orf113Q5VZT2 155 aa21.8■■□□□ 1.08
SSSCA1-207ENST00000533115 AMTNQ6UX39 209 aa21.8■■□□□ 1.08
SSSCA1-207ENST00000533115 Q6ZRG5 221 aa21.8■■□□□ 1.08
SSSCA1-207ENST00000533115 ZNF738Q8NE65 137 aa21.8■■□□□ 1.08
SSSCA1-207ENST00000533115 LRRC20Q8TCA0 184 aa21.8■■□□□ 1.08
SSSCA1-207ENST00000533115 NMES1Q9C002 83 aa21.8■■□□□ 1.08
SSSCA1-207ENST00000533115 CELA1Q9UNI1 258 aa21.8■■□□□ 1.08
SSSCA1-207ENST00000533115 UBE2L5PA0A1B0GUS4 154 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms