RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 CCL24O00175 119 aa10.91□□□□□ -0.66
TRIM3-212ENST00000533064 ARL14EPLP0DKL9 152 aa10.91□□□□□ -0.66
TRIM3-212ENST00000533064 SVBPQ8N300 66 aa10.91□□□□□ -0.66
TRIM3-212ENST00000533064 C3orf56Q8N813 242 aa10.91□□□□□ -0.66
TRIM3-212ENST00000533064 RAX2Q96IS3 184 aa10.91□□□□□ -0.66
TRIM3-212ENST00000533064 METTL26Q96S19 204 aa10.91□□□□□ -0.66
TRIM3-212ENST00000533064 MRPL32Q9BYC8 188 aaKnown RBP10.91□□□□□ -0.66
TRIM3-212ENST00000533064 ZFAND3Q9H8U3 227 aa10.91□□□□□ -0.66
TRIM3-212ENST00000533064 STAB1Q9NY15 2570 aa10.91□□□□□ -0.66
TRIM3-212ENST00000533064 IGHV3OR16-8A0A075B7F1 116 aa10.9□□□□□ -0.66
TRIM3-212ENST00000533064 NDUFS6O75380 124 aaKnown RBP10.9□□□□□ -0.66
TRIM3-212ENST00000533064 SRP19P09132 144 aaKnown RBP10.9□□□□□ -0.66
TRIM3-212ENST00000533064 USF2Q15853 346 aaPredicted RBP10.9□□□□□ -0.66
TRIM3-212ENST00000533064 SPATA31B1PQ5VZV4 182 aa10.9□□□□□ -0.66
TRIM3-212ENST00000533064 LINC00305Q7Z4B0 112 aa10.9□□□□□ -0.66
TRIM3-212ENST00000533064 C1QL4Q86Z23 238 aa10.9□□□□□ -0.66
TRIM3-212ENST00000533064 TMEM37Q8WXS4 190 aa10.9□□□□□ -0.66
TRIM3-212ENST00000533064 TMEM190Q8WZ59 177 aa10.9□□□□□ -0.66
TRIM3-212ENST00000533064 DUX3Q96PT4 197 aa10.9□□□□□ -0.66
TRIM3-212ENST00000533064 TECRQ9NZ01 308 aaKnown RBP10.9□□□□□ -0.66
TRIM3-212ENST00000533064 RNF24Q9Y225 148 aa10.9□□□□□ -0.66
TRIM3-212ENST00000533064 UFC1Q9Y3C8 167 aa10.9□□□□□ -0.66
TRIM3-212ENST00000533064 NPPCP23582 126 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 SLURP1P55000 103 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 SYNJ2BPP57105 145 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 TAS2R45P59539 299 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 MIR17HGQ75NE6 70 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 ZNF747Q9BV97 191 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 DAZ1Q9NQZ3 744 aaKnown RBP10.89□□□□□ -0.67
TRIM3-212ENST00000533064 MRPL27Q9P0M9 148 aaKnown RBP10.89□□□□□ -0.67
TRIM3-212ENST00000533064 ADARB2-AS1A8MUL3 147 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 LGALS9O00182 355 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 GCHFRP30047 84 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 MYCNOSP40205 109 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 MEF2BQ02080 365 aaPredicted RBP10.89□□□□□ -0.67
TRIM3-212ENST00000533064 FHL3Q13643 280 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 GUCA2BQ16661 112 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 SOHLH1Q5JUK2 328 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 UNQ9165/PRO28630Q6UXU0 137 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 PATE2Q6UY27 113 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 REC114Q7Z4M0 266 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 OR4F17Q8NGA8 305 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 UHRF2Q96PU4 802 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 OR4F4Q96R69 305 aa10.89□□□□□ -0.67
TRIM3-212ENST00000533064 ZNF207O43670 478 aaKnown RBP10.88□□□□□ -0.67
TRIM3-212ENST00000533064 PF4P02776 101 aa10.88□□□□□ -0.67
TRIM3-212ENST00000533064 C8orf88P0DMB2 117 aa10.88□□□□□ -0.67
TRIM3-212ENST00000533064 KLF5Q13887 457 aaPredicted RBP10.88□□□□□ -0.67
TRIM3-212ENST00000533064 PQLC2Q6ZP29 291 aa10.88□□□□□ -0.67
TRIM3-212ENST00000533064 ZNF414Q96IQ9 312 aa10.88□□□□□ -0.67
TRIM3-212ENST00000533064 SLC25A39Q9BZJ4 359 aaPredicted RBP10.88□□□□□ -0.67
TRIM3-212ENST00000533064 PEMTQ9UBM1 199 aa10.88□□□□□ -0.67
TRIM3-212ENST00000533064 A0A1W2PS18 150 aa10.87□□□□□ -0.67
TRIM3-212ENST00000533064 K7EMT4 169 aa10.87□□□□□ -0.67
TRIM3-212ENST00000533064 PAGE4O60829 102 aa10.87□□□□□ -0.67
TRIM3-212ENST00000533064 SNAPINO95295 136 aa10.87□□□□□ -0.67
TRIM3-212ENST00000533064 BMI1P35226 326 aa10.87□□□□□ -0.67
TRIM3-212ENST00000533064 CYB561D1Q8N8Q1 229 aa10.87□□□□□ -0.67
TRIM3-212ENST00000533064 A8MWP6 167 aa10.86□□□□□ -0.67
TRIM3-212ENST00000533064 H3BRN7 92 aa10.86□□□□□ -0.67
TRIM3-212ENST00000533064 CRYBB3P26998 211 aa10.86□□□□□ -0.67
TRIM3-212ENST00000533064 CD81P60033 236 aa10.86□□□□□ -0.67
TRIM3-212ENST00000533064 TM4SF20Q53R12 229 aa10.86□□□□□ -0.67
TRIM3-212ENST00000533064 SHISA2Q6UWI4 295 aa10.86□□□□□ -0.67
TRIM3-212ENST00000533064 GRAMD2BQ96HH9 432 aa10.86□□□□□ -0.67
TRIM3-212ENST00000533064 TXNDC17Q9BRA2 123 aa10.86□□□□□ -0.67
TRIM3-212ENST00000533064 TMEM167BQ9NRX6 74 aa10.86□□□□□ -0.67
TRIM3-212ENST00000533064 PRELID1Q9Y255 219 aa10.86□□□□□ -0.67
TRIM3-212ENST00000533064 ZNF98A6NK75 572 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 TMEM250H0YL14 139 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 OR7C2O60412 319 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 SCO1O75880 301 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 DLX4Q92988 240 aaPredicted RBP10.85□□□□□ -0.67
TRIM3-212ENST00000533064 FAM167A-AS1Q96KT0 104 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 SHANK2-AS3Q9BTD1 123 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 ARL2-SNX15V9GYD0 113 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 C11orf94C9JXX5 98 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 M0QZ24 198 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 OVOL1O14753 267 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 RIPPLY3P57055 190 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 MORN5Q5VZ52 161 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 ATRAIDQ6UW56 229 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 STXBP6Q8NFX7 210 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 OR9G4Q8NGQ1 327 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 SUN5Q8TC36 379 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 ZNF503Q96F45 646 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 SLC25A2Q9BXI2 301 aa10.85□□□□□ -0.67
TRIM3-212ENST00000533064 NKX6-2Q9C056 277 aaPredicted RBP10.85□□□□□ -0.67
TRIM3-212ENST00000533064 IGHV7-4-1A0A0J9YVY3 117 aa10.84□□□□□ -0.67
TRIM3-212ENST00000533064 CEBPGP53567 150 aa10.84□□□□□ -0.67
TRIM3-212ENST00000533064 UBE2G2P60604 165 aa10.84□□□□□ -0.67
TRIM3-212ENST00000533064 CST9LP1Q5W188 147 aa10.84□□□□□ -0.67
TRIM3-212ENST00000533064 FAM90A2PQ658T7 463 aa10.84□□□□□ -0.67
TRIM3-212ENST00000533064 LEMD1Q68G75 181 aa10.84□□□□□ -0.67
TRIM3-212ENST00000533064 BPIFA4PQ86YQ2 179 aa10.84□□□□□ -0.67
TRIM3-212ENST00000533064 OR8I2Q8N0Y5 310 aa10.84□□□□□ -0.67
TRIM3-212ENST00000533064 CLRN3Q8NCR9 226 aa10.84□□□□□ -0.67
TRIM3-212ENST00000533064 ELOVL1Q9BW60 279 aa10.84□□□□□ -0.67
TRIM3-212ENST00000533064 IGHV3OR16-13A0A075B7E8 117 aa10.83□□□□□ -0.68
TRIM3-212ENST00000533064 IGHV3-49A0A0A0MS15 119 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms