RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 PRR20CP86479 221 aa9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 PRR20DP86480 221 aa9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 PRR20BP86481 221 aa9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 PRR20AP86496 221 aa9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 FFAR4Q5NUL3 377 aa9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 C1orf194Q5T5A4 169 aa9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 LEMD1Q68G75 181 aa9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 SIGLEC15Q6ZMC9 328 aa9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 GLMPQ8WWB7 406 aa9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 PFDN5Q99471 154 aa9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 FAM110AQ9BQ89 295 aa9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 SPATA25Q9BR10 227 aa9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 SHANK2-AS3Q9BTD1 123 aa9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 SCRT1Q9BWW7 348 aa9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 PARD6GQ9BYG4 376 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 RNF24Q9Y225 148 aa9.66□□□□□ -0.86
TRAPPC4-212ENST00000533058 A0A0D9SG52 128 aa9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 KANTRA0A1W2PQU2 76 aa9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 C3orf84H3BNL1 204 aa9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 H3BRN7 92 aa9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 TAAR5O14804 337 aa9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 PFDN1O60925 122 aa9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 GALR1P47211 349 aa9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 FAM90A2PQ658T7 463 aa9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 RPL7L1Q6DKI1 246 aaKnown RBP9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 PATE2Q6UY27 113 aa9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 LINC00305Q7Z4B0 112 aa9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 KCNRGQ8N5I3 272 aa9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 DEFB125Q8N687 156 aa9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 CITED4Q96RK1 184 aa9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 ARPC5LQ9BPX5 153 aa9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 MS4A6AQ9H2W1 248 aa9.65□□□□□ -0.86
TRAPPC4-212ENST00000533058 C1QBP02746 253 aa9.64□□□□□ -0.87
TRAPPC4-212ENST00000533058 ATF4P18848 351 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC4-212ENST00000533058 ZNF345Q14585 488 aa9.64□□□□□ -0.87
TRAPPC4-212ENST00000533058 ZFP69Q49AA0 526 aa9.64□□□□□ -0.87
TRAPPC4-212ENST00000533058 GCSAMLQ5JQS6 135 aa9.64□□□□□ -0.87
TRAPPC4-212ENST00000533058 GPR82Q96P67 336 aa9.64□□□□□ -0.87
TRAPPC4-212ENST00000533058 SLC25A32Q9H2D1 315 aa9.64□□□□□ -0.87
TRAPPC4-212ENST00000533058 SRD5A3Q9H8P0 318 aa9.64□□□□□ -0.87
TRAPPC4-212ENST00000533058 RBMY1BA6NDE4 496 aaKnown RBP9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 RBMY1EA6NEQ0 496 aaKnown RBP9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 JTBO76095 146 aa9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 RBMY1DP0C7P1 496 aaKnown RBP9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 RPL7P18124 248 aaKnown RBP9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 CXCL2P19875 107 aa9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 CD300CQ08708 224 aa9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 ACOT6Q3I5F7 207 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 GATAD1Q8WUU5 269 aa9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 TMEM37Q8WXS4 190 aa9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 GNPNAT1Q96EK6 184 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 HYLS1Q96M11 299 aa9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 ZNF471Q9BX82 626 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 NRN1Q9NPD7 142 aa9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 UBQLN2Q9UHD9 624 aa9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 TIMM9Q9Y5J7 89 aa9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 RFNGQ9Y644 331 aa9.63□□□□□ -0.87
TRAPPC4-212ENST00000533058 ATP6V0CP27449 155 aa9.62□□□□□ -0.87
TRAPPC4-212ENST00000533058 FAM78BQ5VT40 261 aa9.62□□□□□ -0.87
TRAPPC4-212ENST00000533058 TMUB2Q71RG4 321 aa9.62□□□□□ -0.87
TRAPPC4-212ENST00000533058 WFDC10AQ9H1F0 79 aa9.62□□□□□ -0.87
TRAPPC4-212ENST00000533058 EDA2RQ9HAV5 297 aa9.62□□□□□ -0.87
TRAPPC4-212ENST00000533058 TRAV5A0A0B4J249 113 aa9.61□□□□□ -0.87
TRAPPC4-212ENST00000533058 BCL2L11O43521 198 aa9.61□□□□□ -0.87
TRAPPC4-212ENST00000533058 CMC4P56277 68 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC4-212ENST00000533058 MORN5Q5VZ52 161 aa9.61□□□□□ -0.87
TRAPPC4-212ENST00000533058 BPIFA4PQ86YQ2 179 aa9.61□□□□□ -0.87
TRAPPC4-212ENST00000533058 OR2G3Q8NGZ4 309 aa9.61□□□□□ -0.87
TRAPPC4-212ENST00000533058 MUC7Q8TAX7 377 aa9.61□□□□□ -0.87
TRAPPC4-212ENST00000533058 LRRC20Q8TCA0 184 aa9.61□□□□□ -0.87
TRAPPC4-212ENST00000533058 SH3BGRL3Q9H299 93 aa9.61□□□□□ -0.87
TRAPPC4-212ENST00000533058 LOC102724200A0A096LPH7 203 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 TRAV2A0A0B4J234 112 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 A0A1W2PPV4 95 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 K7EQG2 157 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 ZNF688P0C7X2 276 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 M6PRP20645 277 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 ID1P41134 155 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 MEOX2P50222 304 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 RAB2AP61019 212 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 SNRPD3P62318 126 aaKnown RBP9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 RHOBP62745 196 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 EIF5AP63241 154 aaKnown RBP9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 ODF3L2Q3SX64 289 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 SPATA31B1PQ5VZV4 182 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 FAM122CQ6P4D5 195 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 MIR17HGQ75NE6 70 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 C16orf92Q96LL3 132 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 LINC00052Q96N35 136 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 PSMG3Q9BT73 122 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 MRPL32Q9BYC8 188 aaKnown RBP9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 CYTL1Q9NRR1 136 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 FUT9Q9Y231 359 aa9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 KMT2CQ8NEZ4 4911 aaKnown RBP9.6□□□□□ -0.87
TRAPPC4-212ENST00000533058 DNAH7Q8WXX0 4024 aa9.59□□□□□ -0.87
TRAPPC4-212ENST00000533058 MBP02144 154 aa9.59□□□□□ -0.87
TRAPPC4-212ENST00000533058 SNRPCP09234 159 aaKnown RBP9.59□□□□□ -0.87
TRAPPC4-212ENST00000533058 C4BPBP20851 252 aa9.59□□□□□ -0.87
TRAPPC4-212ENST00000533058 DEFB131AP59861 70 aa9.59□□□□□ -0.87
TRAPPC4-212ENST00000533058 SERF2P84101 59 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms