RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 RYR3Q15413 4870 aa10.83□□□□□ -0.68
COL16A1-217ENST00000532877 TRAV5A0A0B4J249 113 aa10.83□□□□□ -0.68
COL16A1-217ENST00000532877 A0A1W2PPV4 95 aa10.83□□□□□ -0.68
COL16A1-217ENST00000532877 A0A1W2PS18 150 aa10.83□□□□□ -0.68
COL16A1-217ENST00000532877 EIF3GO75821 320 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL16A1-217ENST00000532877 BMI1P35226 326 aa10.83□□□□□ -0.68
COL16A1-217ENST00000532877 RAB5CP51148 216 aa10.83□□□□□ -0.68
COL16A1-217ENST00000532877 C1orf194Q5T5A4 169 aa10.83□□□□□ -0.68
COL16A1-217ENST00000532877 DPPA3Q6W0C5 159 aa10.83□□□□□ -0.68
COL16A1-217ENST00000532877 SSX7Q7RTT5 188 aa10.83□□□□□ -0.68
COL16A1-217ENST00000532877 ZNF680Q8NEM1 530 aa10.83□□□□□ -0.68
COL16A1-217ENST00000532877 FAM213BQ8TBF2 198 aa10.83□□□□□ -0.68
COL16A1-217ENST00000532877 RAB24Q969Q5 203 aa10.83□□□□□ -0.68
COL16A1-217ENST00000532877 ACTR3CQ9C0K3 210 aaPredicted RBP10.83□□□□□ -0.68
COL16A1-217ENST00000532877 TMEM231Q9H6L2 316 aa10.83□□□□□ -0.68
COL16A1-217ENST00000532877 TECRQ9NZ01 308 aaKnown RBP10.83□□□□□ -0.68
COL16A1-217ENST00000532877 MLXQ9UH92 298 aa10.83□□□□□ -0.68
COL16A1-217ENST00000532877 CTXND1A0A1B0GTU2 59 aa10.82□□□□□ -0.68
COL16A1-217ENST00000532877 SAP30O75446 220 aa10.82□□□□□ -0.68
COL16A1-217ENST00000532877 IFNA7P01567 189 aa10.82□□□□□ -0.68
COL16A1-217ENST00000532877 CD33P20138 364 aa10.82□□□□□ -0.68
COL16A1-217ENST00000532877 C16orf54Q6UWD8 224 aa10.82□□□□□ -0.68
COL16A1-217ENST00000532877 GLMPQ8WWB7 406 aa10.82□□□□□ -0.68
COL16A1-217ENST00000532877 GRAMD2BQ96HH9 432 aa10.82□□□□□ -0.68
COL16A1-217ENST00000532877 FAM167A-AS1Q96KT0 104 aa10.82□□□□□ -0.68
COL16A1-217ENST00000532877 SLC25A2Q9BXI2 301 aa10.82□□□□□ -0.68
COL16A1-217ENST00000532877 SIGLEC8Q9NYZ4 499 aa10.82□□□□□ -0.68
COL16A1-217ENST00000532877 NOTCH3Q9UM47 2321 aa10.81□□□□□ -0.68
COL16A1-217ENST00000532877 HMGB3O15347 200 aaKnown RBP10.81□□□□□ -0.68
COL16A1-217ENST00000532877 TAS2R45P59539 299 aa10.81□□□□□ -0.68
COL16A1-217ENST00000532877 IFITM2Q01629 132 aa10.81□□□□□ -0.68
COL16A1-217ENST00000532877 KHDC3LQ587J8 217 aa10.81□□□□□ -0.68
COL16A1-217ENST00000532877 OR8I2Q8N0Y5 310 aa10.81□□□□□ -0.68
COL16A1-217ENST00000532877 WFDC9Q8NEX5 89 aa10.81□□□□□ -0.68
COL16A1-217ENST00000532877 DYNLRB2Q8TF09 96 aa10.81□□□□□ -0.68
COL16A1-217ENST00000532877 RNF141Q8WVD5 230 aa10.81□□□□□ -0.68
COL16A1-217ENST00000532877 RNF24Q9Y225 148 aa10.81□□□□□ -0.68
COL16A1-217ENST00000532877 SELENOKQ9Y6D0 94 aa10.81□□□□□ -0.68
COL16A1-217ENST00000532877 ZNF705EA8MWA4 302 aaPredicted RBP10.8□□□□□ -0.68
COL16A1-217ENST00000532877 MRPS12O15235 138 aaKnown RBP10.8□□□□□ -0.68
COL16A1-217ENST00000532877 STAG3L2P0CL84 134 aa10.8□□□□□ -0.68
COL16A1-217ENST00000532877 STAG3L3P0CL85 134 aa10.8□□□□□ -0.68
COL16A1-217ENST00000532877 GP9P14770 177 aa10.8□□□□□ -0.68
COL16A1-217ENST00000532877 RPL7P18124 248 aaKnown RBP10.8□□□□□ -0.68
COL16A1-217ENST00000532877 SIGLEC15Q6ZMC9 328 aa10.8□□□□□ -0.68
COL16A1-217ENST00000532877 ZNF503Q96F45 646 aa10.8□□□□□ -0.68
COL16A1-217ENST00000532877 GPR82Q96P67 336 aa10.8□□□□□ -0.68
COL16A1-217ENST00000532877 UBQLN2Q9UHD9 624 aa10.8□□□□□ -0.68
COL16A1-217ENST00000532877 MAP1LC3B2A6NCE7 125 aa10.79□□□□□ -0.68
COL16A1-217ENST00000532877 OR7C2O60412 319 aa10.79□□□□□ -0.68
COL16A1-217ENST00000532877 ARL14EPLP0DKL9 152 aa10.79□□□□□ -0.68
COL16A1-217ENST00000532877 PYYP10082 97 aa10.79□□□□□ -0.68
COL16A1-217ENST00000532877 LCN15Q6UWW0 184 aa10.79□□□□□ -0.68
COL16A1-217ENST00000532877 TCF24Q7RTU0 167 aa10.79□□□□□ -0.68
COL16A1-217ENST00000532877 BPIFA4PQ86YQ2 179 aa10.79□□□□□ -0.68
COL16A1-217ENST00000532877 MAP1LC3BQ9GZQ8 125 aa10.79□□□□□ -0.68
COL16A1-217ENST00000532877 TMEM14CQ9P0S9 112 aa10.79□□□□□ -0.68
COL16A1-217ENST00000532877 HELTA6NFD8 242 aa10.78□□□□□ -0.68
COL16A1-217ENST00000532877 H2AFB1P0C5Y9 115 aa10.78□□□□□ -0.68
COL16A1-217ENST00000532877 IGLC2P0DOY2 106 aa10.78□□□□□ -0.68
COL16A1-217ENST00000532877 GALR1P47211 349 aa10.78□□□□□ -0.68
COL16A1-217ENST00000532877 FGF8P55075 233 aaPredicted RBP10.78□□□□□ -0.68
COL16A1-217ENST00000532877 DEFB114Q30KQ6 69 aa10.78□□□□□ -0.68
COL16A1-217ENST00000532877 CD300EQ496F6 205 aaPredicted RBP10.78□□□□□ -0.68
COL16A1-217ENST00000532877 FAM90A2PQ658T7 463 aa10.78□□□□□ -0.68
COL16A1-217ENST00000532877 PQLC2Q6ZP29 291 aa10.78□□□□□ -0.68
COL16A1-217ENST00000532877 STXBP6Q8NFX7 210 aa10.78□□□□□ -0.68
COL16A1-217ENST00000532877 SFT2D1Q8WV19 159 aa10.78□□□□□ -0.68
COL16A1-217ENST00000532877 MBD3L1Q8WWY6 194 aa10.78□□□□□ -0.68
COL16A1-217ENST00000532877 PAXXQ9BUH6 204 aa10.78□□□□□ -0.68
COL16A1-217ENST00000532877 MCRIP2Q9BUT9 160 aaKnown RBP10.78□□□□□ -0.68
COL16A1-217ENST00000532877 SMAD5-AS1Q9Y6J3 95 aa10.78□□□□□ -0.68
COL16A1-217ENST00000532877 CXorf1O96002 111 aa10.77□□□□□ -0.69
COL16A1-217ENST00000532877 IGLV1-51P01701 117 aa10.77□□□□□ -0.69
COL16A1-217ENST00000532877 CD5P06127 495 aa10.77□□□□□ -0.69
COL16A1-217ENST00000532877 OR10J4P0C629 311 aa10.77□□□□□ -0.69
COL16A1-217ENST00000532877 IGLL1P15814 213 aa10.77□□□□□ -0.69
COL16A1-217ENST00000532877 ATF4P18848 351 aaPredicted RBP10.77□□□□□ -0.69
COL16A1-217ENST00000532877 UBE2L3P68036 154 aaKnown RBP10.77□□□□□ -0.69
COL16A1-217ENST00000532877 C9orf66Q5T8R8 295 aa10.77□□□□□ -0.69
COL16A1-217ENST00000532877 ZNF767PQ75MW2 155 aa10.77□□□□□ -0.69
COL16A1-217ENST00000532877 TMEM61Q8N0U2 210 aa10.77□□□□□ -0.69
COL16A1-217ENST00000532877 FXYD5Q96DB9 178 aa10.77□□□□□ -0.69
COL16A1-217ENST00000532877 SAT2Q96F10 170 aaPredicted RBP10.77□□□□□ -0.69
COL16A1-217ENST00000532877 C17orf77Q96MU5 243 aa10.77□□□□□ -0.69
COL16A1-217ENST00000532877 OR51M1Q9H341 326 aa10.77□□□□□ -0.69
COL16A1-217ENST00000532877 IGKV3-7A0A075B6H7 116 aa10.76□□□□□ -0.69
COL16A1-217ENST00000532877 A0A087X0K7 114 aa10.76□□□□□ -0.69
COL16A1-217ENST00000532877 A0A1B0GV50 99 aa10.76□□□□□ -0.69
COL16A1-217ENST00000532877 H3BQ15 152 aa10.76□□□□□ -0.69
COL16A1-217ENST00000532877 SNRPCP09234 159 aaKnown RBP10.76□□□□□ -0.69
COL16A1-217ENST00000532877 GCHFRP30047 84 aa10.76□□□□□ -0.69
COL16A1-217ENST00000532877 INSL3P51460 131 aa10.76□□□□□ -0.69
COL16A1-217ENST00000532877 RPL11P62913 178 aaKnown RBP10.76□□□□□ -0.69
COL16A1-217ENST00000532877 BLOC1S1P78537 153 aa10.76□□□□□ -0.69
COL16A1-217ENST00000532877 LRRC20Q8TCA0 184 aa10.76□□□□□ -0.69
COL16A1-217ENST00000532877 PCNPQ8WW12 178 aaKnown RBP10.76□□□□□ -0.69
COL16A1-217ENST00000532877 HRH4Q9H3N8 390 aa10.76□□□□□ -0.69
COL16A1-217ENST00000532877 TRAV1-1A0A0B4J248 108 aa10.75□□□□□ -0.69
COL16A1-217ENST00000532877 IZUMO1RA6ND01 250 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms