RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 C2orf50Q96LR7 162 aa12.48□□□□□ -0.41
PHRF1-204ENST00000532550 CLUHP3Q96NS8 147 aa12.48□□□□□ -0.41
PHRF1-204ENST00000532550 GGACTQ9BVM4 153 aa12.48□□□□□ -0.41
PHRF1-204ENST00000532550 HRH4Q9H3N8 390 aa12.48□□□□□ -0.41
PHRF1-204ENST00000532550 GOSR2O14653 212 aa12.47□□□□□ -0.41
PHRF1-204ENST00000532550 DEDDO75618 318 aa12.47□□□□□ -0.41
PHRF1-204ENST00000532550 FXYD7P58549 80 aa12.47□□□□□ -0.41
PHRF1-204ENST00000532550 PLP1P60201 277 aa12.47□□□□□ -0.41
PHRF1-204ENST00000532550 FGL1Q08830 312 aa12.47□□□□□ -0.41
PHRF1-204ENST00000532550 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.47□□□□□ -0.41
PHRF1-204ENST00000532550 SHANK2-AS3Q9BTD1 123 aa12.47□□□□□ -0.41
PHRF1-204ENST00000532550 SCRT1Q9BWW7 348 aa12.47□□□□□ -0.41
PHRF1-204ENST00000532550 ARL6Q9H0F7 186 aa12.47□□□□□ -0.41
PHRF1-204ENST00000532550 C11orf94C9JXX5 98 aa12.46□□□□□ -0.41
PHRF1-204ENST00000532550 F6UB75 175 aa12.46□□□□□ -0.41
PHRF1-204ENST00000532550 H3BRN7 92 aa12.46□□□□□ -0.41
PHRF1-204ENST00000532550 K7EPK0 472 aa12.46□□□□□ -0.41
PHRF1-204ENST00000532550 RPL7P18124 248 aaKnown RBP12.46□□□□□ -0.41
PHRF1-204ENST00000532550 PVALBP20472 110 aaPredicted RBP12.46□□□□□ -0.41
PHRF1-204ENST00000532550 PSG9Q00887 426 aa12.46□□□□□ -0.41
PHRF1-204ENST00000532550 ARL16Q0P5N6 197 aa12.46□□□□□ -0.41
PHRF1-204ENST00000532550 ASAH1Q13510 395 aa12.46□□□□□ -0.41
PHRF1-204ENST00000532550 FAM78BQ5VT40 261 aa12.46□□□□□ -0.41
PHRF1-204ENST00000532550 C2CD4CQ8TF44 421 aa12.46□□□□□ -0.41
PHRF1-204ENST00000532550 RNF24Q9Y225 148 aa12.46□□□□□ -0.41
PHRF1-204ENST00000532550 ALMS1Q8TCU4 4167 aa12.46□□□□□ -0.42
PHRF1-204ENST00000532550 ELOA3CA0A087WX78 387 aaPredicted RBP12.45□□□□□ -0.42
PHRF1-204ENST00000532550 A0A0J9YX75 114 aa12.45□□□□□ -0.42
PHRF1-204ENST00000532550 HLA-DMBP28068 263 aa12.45□□□□□ -0.42
PHRF1-204ENST00000532550 CAV2P51636 162 aa12.45□□□□□ -0.42
PHRF1-204ENST00000532550 SLC38A11Q08AI6 406 aa12.45□□□□□ -0.42
PHRF1-204ENST00000532550 PXDC1Q5TGL8 231 aa12.45□□□□□ -0.42
PHRF1-204ENST00000532550 C20orf173Q96LM9 149 aa12.45□□□□□ -0.42
PHRF1-204ENST00000532550 C17orf77Q96MU5 243 aa12.45□□□□□ -0.42
PHRF1-204ENST00000532550 HYDINQ4G0P3 5121 aa12.44□□□□□ -0.42
PHRF1-204ENST00000532550 IGHV3OR16-12A0A075B7B8 117 aa12.44□□□□□ -0.42
PHRF1-204ENST00000532550 AGPAT2O15120 278 aa12.44□□□□□ -0.42
PHRF1-204ENST00000532550 RAB31Q13636 194 aa12.44□□□□□ -0.42
PHRF1-204ENST00000532550 ZNF546Q86UE3 836 aa12.44□□□□□ -0.42
PHRF1-204ENST00000532550 ENKURQ8TC29 256 aa12.44□□□□□ -0.42
PHRF1-204ENST00000532550 LRRC20Q8TCA0 184 aa12.44□□□□□ -0.42
PHRF1-204ENST00000532550 UHRF2Q96PU4 802 aa12.44□□□□□ -0.42
PHRF1-204ENST00000532550 SLC35B3Q9H1N7 401 aa12.44□□□□□ -0.42
PHRF1-204ENST00000532550 ARV1Q9H2C2 271 aa12.44□□□□□ -0.42
PHRF1-204ENST00000532550 FAM24AA6NFZ4 105 aa12.43□□□□□ -0.42
PHRF1-204ENST00000532550 SMIM9A6NGZ8 99 aa12.43□□□□□ -0.42
PHRF1-204ENST00000532550 UPK1BO75841 260 aa12.43□□□□□ -0.42
PHRF1-204ENST00000532550 CST7O76096 145 aa12.43□□□□□ -0.42
PHRF1-204ENST00000532550 TCTAP57738 103 aa12.43□□□□□ -0.42
PHRF1-204ENST00000532550 S100A10P60903 97 aa12.43□□□□□ -0.42
PHRF1-204ENST00000532550 IGFL4Q6B9Z1 124 aa12.43□□□□□ -0.42
PHRF1-204ENST00000532550 PATE2Q6UY27 113 aa12.43□□□□□ -0.42
PHRF1-204ENST00000532550 ZNF705AQ6ZN79 300 aaPredicted RBP12.43□□□□□ -0.42
PHRF1-204ENST00000532550 ZNF709Q8N972 641 aa12.43□□□□□ -0.42
PHRF1-204ENST00000532550 NEU1Q99519 415 aa12.43□□□□□ -0.42
PHRF1-204ENST00000532550 GPN1Q9HCN4 374 aaPredicted RBP12.43□□□□□ -0.42
PHRF1-204ENST00000532550 IGLL5B9A064 214 aa12.42□□□□□ -0.42
PHRF1-204ENST00000532550 DUSP14O95147 198 aaKnown RBP12.42□□□□□ -0.42
PHRF1-204ENST00000532550 LINC00305Q7Z4B0 112 aa12.42□□□□□ -0.42
PHRF1-204ENST00000532550 PTTG2Q9NZH5 202 aa12.42□□□□□ -0.42
PHRF1-204ENST00000532550 GOLT1BQ9Y3E0 138 aa12.42□□□□□ -0.42
PHRF1-204ENST00000532550 TRAV8-2A0A0B4J237 113 aa12.41□□□□□ -0.42
PHRF1-204ENST00000532550 TRAV10A0A0B4J240 114 aa12.41□□□□□ -0.42
PHRF1-204ENST00000532550 ZNF705FA8MVS1 300 aaPredicted RBP12.41□□□□□ -0.42
PHRF1-204ENST00000532550 COX7A2P2O60397 106 aa12.41□□□□□ -0.42
PHRF1-204ENST00000532550 ZNF705DP0CH99 300 aaPredicted RBP12.41□□□□□ -0.42
PHRF1-204ENST00000532550 ZNF705BP0CI00 300 aaPredicted RBP12.41□□□□□ -0.42
PHRF1-204ENST00000532550 CAMLGP49069 296 aa12.41□□□□□ -0.42
PHRF1-204ENST00000532550 IL15RAQ13261 267 aa12.41□□□□□ -0.42
PHRF1-204ENST00000532550 RAB32Q13637 225 aa12.41□□□□□ -0.42
PHRF1-204ENST00000532550 LGALS9CQ6DKI2 356 aa12.41□□□□□ -0.42
PHRF1-204ENST00000532550 Q6ZRG5 221 aa12.41□□□□□ -0.42
PHRF1-204ENST00000532550 Q6ZTC4 211 aa12.41□□□□□ -0.42
PHRF1-204ENST00000532550 RNF182Q8N6D2 247 aa12.41□□□□□ -0.42
PHRF1-204ENST00000532550 MGST2Q99735 147 aa12.41□□□□□ -0.42
PHRF1-204ENST00000532550 C11orf1Q9H5F2 150 aa12.41□□□□□ -0.42
PHRF1-204ENST00000532550 TMEM189A5PLL7 270 aa12.4□□□□□ -0.42
PHRF1-204ENST00000532550 S100A11P31949 105 aa12.4□□□□□ -0.42
PHRF1-204ENST00000532550 SULT1A1P50225 295 aa12.4□□□□□ -0.42
PHRF1-204ENST00000532550 EMP1P54849 157 aa12.4□□□□□ -0.42
PHRF1-204ENST00000532550 ZNF738Q8NE65 137 aa12.4□□□□□ -0.42
PHRF1-204ENST00000532550 LYRM2Q9NU23 88 aaPredicted RBP12.4□□□□□ -0.42
PHRF1-204ENST00000532550 UQCC1Q9NVA1 299 aa12.4□□□□□ -0.42
PHRF1-204ENST00000532550 RFNGQ9Y644 331 aa12.4□□□□□ -0.42
PHRF1-204ENST00000532550 A0A087X0K7 114 aa12.39□□□□□ -0.43
PHRF1-204ENST00000532550 SPART-AS1P0CW21 52 aa12.39□□□□□ -0.43
PHRF1-204ENST00000532550 CNN1P51911 297 aaKnown RBP12.39□□□□□ -0.43
PHRF1-204ENST00000532550 HBG1P69891 147 aa12.39□□□□□ -0.43
PHRF1-204ENST00000532550 HBG2P69892 147 aa12.39□□□□□ -0.43
PHRF1-204ENST00000532550 C12orf74Q32Q52 190 aa12.39□□□□□ -0.43
PHRF1-204ENST00000532550 C10orf113Q5VZT2 155 aa12.39□□□□□ -0.43
PHRF1-204ENST00000532550 NRARPQ7Z6K4 114 aa12.39□□□□□ -0.43
PHRF1-204ENST00000532550 STX12Q86Y82 276 aa12.39□□□□□ -0.43
PHRF1-204ENST00000532550 BPIFA4PQ86YQ2 179 aa12.39□□□□□ -0.43
PHRF1-204ENST00000532550 TMEM252Q8N6L7 170 aa12.39□□□□□ -0.43
PHRF1-204ENST00000532550 DNAJC4Q9NNZ3 241 aa12.39□□□□□ -0.43
PHRF1-204ENST00000532550 CELA1Q9UNI1 258 aa12.39□□□□□ -0.43
PHRF1-204ENST00000532550 A8MTW9 85 aa12.38□□□□□ -0.43
PHRF1-204ENST00000532550 HBE1P02100 147 aa12.38□□□□□ -0.43
PHRF1-204ENST00000532550 AMBPP02760 352 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms