RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 DNAH3Q8TD57 4116 aa16.64■□□□□ 0.25
LRRK1-208ENST00000532029 OR11H12B2RN74 326 aa16.64■□□□□ 0.25
LRRK1-208ENST00000532029 TAAR5O14804 337 aa16.64■□□□□ 0.25
LRRK1-208ENST00000532029 ZNF345Q14585 488 aa16.64■□□□□ 0.25
LRRK1-208ENST00000532029 FFAR4Q5NUL3 377 aa16.64■□□□□ 0.25
LRRK1-208ENST00000532029 HSD17B11Q8NBQ5 300 aa16.64■□□□□ 0.25
LRRK1-208ENST00000532029 UBQLN2Q9UHD9 624 aa16.64■□□□□ 0.25
LRRK1-208ENST00000532029 K7EQG2 157 aa16.63■□□□□ 0.25
LRRK1-208ENST00000532029 KCNRGQ8N5I3 272 aa16.63■□□□□ 0.25
LRRK1-208ENST00000532029 TUBA4BQ9H853 241 aa16.63■□□□□ 0.25
LRRK1-208ENST00000532029 TIMM9Q9Y5J7 89 aa16.63■□□□□ 0.25
LRRK1-208ENST00000532029 IGHV4-30-4P0DP06 118 aa16.62■□□□□ 0.25
LRRK1-208ENST00000532029 ATF4P18848 351 aaPredicted RBP16.62■□□□□ 0.25
LRRK1-208ENST00000532029 ODF3L2Q3SX64 289 aa16.62■□□□□ 0.25
LRRK1-208ENST00000532029 GCSAMLQ5JQS6 135 aa16.62■□□□□ 0.25
LRRK1-208ENST00000532029 RPL7L1Q6DKI1 246 aaKnown RBP16.62■□□□□ 0.25
LRRK1-208ENST00000532029 DCANP1Q8TF63 244 aa16.62■□□□□ 0.25
LRRK1-208ENST00000532029 A0A0D9SG52 128 aa16.61■□□□□ 0.25
LRRK1-208ENST00000532029 DEFB125Q8N687 156 aa16.61■□□□□ 0.25
LRRK1-208ENST00000532029 ARPC5LQ9BPX5 153 aa16.61■□□□□ 0.25
LRRK1-208ENST00000532029 FAM110AQ9BQ89 295 aa16.61■□□□□ 0.25
LRRK1-208ENST00000532029 WFDC10AQ9H1F0 79 aa16.61■□□□□ 0.25
LRRK1-208ENST00000532029 MAP6D1Q9H9H5 199 aa16.61■□□□□ 0.25
LRRK1-208ENST00000532029 C19orf73Q9NVV2 129 aa16.61■□□□□ 0.25
LRRK1-208ENST00000532029 JTBO76095 146 aa16.6■□□□□ 0.25
LRRK1-208ENST00000532029 C1QBP02746 253 aa16.6■□□□□ 0.25
LRRK1-208ENST00000532029 ATP6V0CP27449 155 aa16.6■□□□□ 0.25
LRRK1-208ENST00000532029 MEOX2P50222 304 aa16.6■□□□□ 0.25
LRRK1-208ENST00000532029 FAM78BQ5VT40 261 aa16.6■□□□□ 0.25
LRRK1-208ENST00000532029 BPIFA4PQ86YQ2 179 aa16.6■□□□□ 0.25
LRRK1-208ENST00000532029 KANTRA0A1W2PQU2 76 aa16.59■□□□□ 0.25
LRRK1-208ENST00000532029 ZNF688P0C7X2 276 aa16.59■□□□□ 0.25
LRRK1-208ENST00000532029 ID1P41134 155 aa16.59■□□□□ 0.25
LRRK1-208ENST00000532029 SNRPD3P62318 126 aaKnown RBP16.59■□□□□ 0.25
LRRK1-208ENST00000532029 ACOT6Q3I5F7 207 aaPredicted RBP16.59■□□□□ 0.25
LRRK1-208ENST00000532029 SAMD13Q5VXD3 122 aa16.59■□□□□ 0.25
LRRK1-208ENST00000532029 MORN5Q5VZ52 161 aa16.59■□□□□ 0.25
LRRK1-208ENST00000532029 FAM24BQ8N5W8 94 aa16.59■□□□□ 0.25
LRRK1-208ENST00000532029 GNPNAT1Q96EK6 184 aaPredicted RBP16.59■□□□□ 0.25
LRRK1-208ENST00000532029 PSMG3Q9BT73 122 aaPredicted RBP16.59■□□□□ 0.25
LRRK1-208ENST00000532029 MRPL32Q9BYC8 188 aaKnown RBP16.59■□□□□ 0.25
LRRK1-208ENST00000532029 SRD5A3Q9H8P0 318 aa16.59■□□□□ 0.25
LRRK1-208ENST00000532029 SEPSECSQ9HD40 501 aaKnown RBP16.59■□□□□ 0.25
LRRK1-208ENST00000532029 RFNGQ9Y644 331 aa16.59■□□□□ 0.25
LRRK1-208ENST00000532029 TRAV5A0A0B4J249 113 aa16.58■□□□□ 0.24
LRRK1-208ENST00000532029 A8MZ25 164 aa16.58■□□□□ 0.24
LRRK1-208ENST00000532029 PFDN1O60925 122 aa16.58■□□□□ 0.24
LRRK1-208ENST00000532029 CXCL2P19875 107 aa16.58■□□□□ 0.24
LRRK1-208ENST00000532029 DEFB131AP59861 70 aa16.58■□□□□ 0.24
LRRK1-208ENST00000532029 APRG1Q8IVJ8 170 aa16.57■□□□□ 0.24
LRRK1-208ENST00000532029 C16orf92Q96LL3 132 aa16.57■□□□□ 0.24
LRRK1-208ENST00000532029 HYLS1Q96M11 299 aa16.57■□□□□ 0.24
LRRK1-208ENST00000532029 CYTL1Q9NRR1 136 aa16.57■□□□□ 0.24
LRRK1-208ENST00000532029 BCL2L11O43521 198 aa16.56■□□□□ 0.24
LRRK1-208ENST00000532029 FRMD6-AS1P0C7T7 363 aa16.56■□□□□ 0.24
LRRK1-208ENST00000532029 M6PRP20645 277 aa16.56■□□□□ 0.24
LRRK1-208ENST00000532029 RHOBP62745 196 aa16.56■□□□□ 0.24
LRRK1-208ENST00000532029 PSMG4Q5JS54 123 aa16.56■□□□□ 0.24
LRRK1-208ENST00000532029 SPATA31B1PQ5VZV4 182 aa16.56■□□□□ 0.24
LRRK1-208ENST00000532029 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.56■□□□□ 0.24
LRRK1-208ENST00000532029 MIR17HGQ75NE6 70 aa16.56■□□□□ 0.24
LRRK1-208ENST00000532029 OR2G3Q8NGZ4 309 aa16.56■□□□□ 0.24
LRRK1-208ENST00000532029 SH3BGRL3Q9H299 93 aa16.56■□□□□ 0.24
LRRK1-208ENST00000532029 FUT9Q9Y231 359 aa16.56■□□□□ 0.24
LRRK1-208ENST00000532029 A0A087X0K7 114 aa16.55■□□□□ 0.24
LRRK1-208ENST00000532029 ISLRO14498 428 aa16.55■□□□□ 0.24
LRRK1-208ENST00000532029 MRPS12O15235 138 aaKnown RBP16.55■□□□□ 0.24
LRRK1-208ENST00000532029 PSMB3P49720 205 aa16.55■□□□□ 0.24
LRRK1-208ENST00000532029 SERF2P84101 59 aa16.55■□□□□ 0.24
LRRK1-208ENST00000532029 TMUB2Q71RG4 321 aa16.55■□□□□ 0.24
LRRK1-208ENST00000532029 LRRC20Q8TCA0 184 aa16.55■□□□□ 0.24
LRRK1-208ENST00000532029 LINC00052Q96N35 136 aa16.55■□□□□ 0.24
LRRK1-208ENST00000532029 SOCS3O14543 225 aa16.54■□□□□ 0.24
LRRK1-208ENST00000532029 MBP02144 154 aa16.54■□□□□ 0.24
LRRK1-208ENST00000532029 RAB2AP61019 212 aa16.54■□□□□ 0.24
LRRK1-208ENST00000532029 CD300CQ08708 224 aa16.54■□□□□ 0.24
LRRK1-208ENST00000532029 ZFP69Q49AA0 526 aa16.54■□□□□ 0.24
LRRK1-208ENST00000532029 OR10G4Q8NGN3 311 aa16.54■□□□□ 0.24
LRRK1-208ENST00000532029 OR10G9Q8NGN4 311 aa16.54■□□□□ 0.24
LRRK1-208ENST00000532029 OR10G7Q8NGN6 311 aa16.54■□□□□ 0.24
LRRK1-208ENST00000532029 ZNF471Q9BX82 626 aaPredicted RBP16.54■□□□□ 0.24
LRRK1-208ENST00000532029 A0A1W2PPV4 95 aa16.53■□□□□ 0.24
LRRK1-208ENST00000532029 ZNF124Q15973 351 aa16.53■□□□□ 0.24
LRRK1-208ENST00000532029 C17orf77Q96MU5 243 aa16.53■□□□□ 0.24
LRRK1-208ENST00000532029 CITED4Q96RK1 184 aa16.53■□□□□ 0.24
LRRK1-208ENST00000532029 B9D2Q9BPU9 175 aa16.53■□□□□ 0.24
LRRK1-208ENST00000532029 SLC25A2Q9BXI2 301 aa16.53■□□□□ 0.24
LRRK1-208ENST00000532029 TMEM14CQ9P0S9 112 aa16.53■□□□□ 0.24
LRRK1-208ENST00000532029 SNRPCP09234 159 aaKnown RBP16.52■□□□□ 0.24
LRRK1-208ENST00000532029 TAS2R45P59539 299 aa16.52■□□□□ 0.24
LRRK1-208ENST00000532029 EIF5AP63241 154 aaKnown RBP16.52■□□□□ 0.24
LRRK1-208ENST00000532029 FAM122CQ6P4D5 195 aa16.52■□□□□ 0.24
LRRK1-208ENST00000532029 LCN15Q6UWW0 184 aa16.52■□□□□ 0.24
LRRK1-208ENST00000532029 HRH4Q9H3N8 390 aa16.52■□□□□ 0.24
LRRK1-208ENST00000532029 LOC102724200A0A096LPH7 203 aaPredicted RBP16.51■□□□□ 0.23
LRRK1-208ENST00000532029 IGLC2P0DOY2 106 aa16.51■□□□□ 0.23
LRRK1-208ENST00000532029 GUK1Q16774 197 aa16.51■□□□□ 0.23
LRRK1-208ENST00000532029 LGALSLQ3ZCW2 172 aaPredicted RBP16.51■□□□□ 0.23
LRRK1-208ENST00000532029 FAM167A-AS1Q96KT0 104 aa16.51■□□□□ 0.23
LRRK1-208ENST00000532029 OR51M1Q9H341 326 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 218.5 ms