RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 ZNF256Q9Y2P7 627 aaPredicted RBP12.72□□□□□ -0.37
SF3B2-211ENST00000531041 SPP1P10451 314 aa12.71□□□□□ -0.37
SF3B2-211ENST00000531041 M6PRP20645 277 aa12.71□□□□□ -0.37
SF3B2-211ENST00000531041 RPL11P62913 178 aaKnown RBP12.71□□□□□ -0.37
SF3B2-211ENST00000531041 FAM78BQ5VT40 261 aa12.71□□□□□ -0.37
SF3B2-211ENST00000531041 MORN5Q5VZ52 161 aa12.71□□□□□ -0.37
SF3B2-211ENST00000531041 LEMD1Q68G75 181 aa12.71□□□□□ -0.37
SF3B2-211ENST00000531041 SLC25A32Q9H2D1 315 aa12.71□□□□□ -0.37
SF3B2-211ENST00000531041 GP9P14770 177 aa12.71□□□□□ -0.38
SF3B2-211ENST00000531041 C4BPBP20851 252 aa12.71□□□□□ -0.38
SF3B2-211ENST00000531041 NKX2-5P52952 324 aaPredicted RBP12.71□□□□□ -0.38
SF3B2-211ENST00000531041 PAFAH1B2P68402 229 aa12.71□□□□□ -0.38
SF3B2-211ENST00000531041 GUCA2BQ16661 112 aa12.71□□□□□ -0.38
SF3B2-211ENST00000531041 STOML3Q8TAV4 291 aa12.71□□□□□ -0.38
SF3B2-211ENST00000531041 MRPL32Q9BYC8 188 aaKnown RBP12.71□□□□□ -0.38
SF3B2-211ENST00000531041 SEPSECSQ9HD40 501 aaKnown RBP12.71□□□□□ -0.38
SF3B2-211ENST00000531041 MBP02144 154 aa12.7□□□□□ -0.38
SF3B2-211ENST00000531041 TPT1P13693 172 aaKnown RBP12.7□□□□□ -0.38
SF3B2-211ENST00000531041 RPL7P18124 248 aaKnown RBP12.7□□□□□ -0.38
SF3B2-211ENST00000531041 GALR1P47211 349 aa12.7□□□□□ -0.38
SF3B2-211ENST00000531041 BAP18Q8IXM2 172 aa12.7□□□□□ -0.38
SF3B2-211ENST00000531041 MS4A6AQ9H2W1 248 aa12.7□□□□□ -0.38
SF3B2-211ENST00000531041 IGKV3-7A0A075B6H7 116 aa12.69□□□□□ -0.38
SF3B2-211ENST00000531041 TRAV2A0A0B4J234 112 aa12.69□□□□□ -0.38
SF3B2-211ENST00000531041 SEC11BP0C7V7 166 aa12.69□□□□□ -0.38
SF3B2-211ENST00000531041 RAB2AP61019 212 aa12.69□□□□□ -0.38
SF3B2-211ENST00000531041 RHOBP62745 196 aa12.69□□□□□ -0.38
SF3B2-211ENST00000531041 SLC51BQ86UW2 128 aa12.69□□□□□ -0.38
SF3B2-211ENST00000531041 BPIFA4PQ86YQ2 179 aa12.69□□□□□ -0.38
SF3B2-211ENST00000531041 OR10G4Q8NGN3 311 aa12.69□□□□□ -0.38
SF3B2-211ENST00000531041 OR10G9Q8NGN4 311 aa12.69□□□□□ -0.38
SF3B2-211ENST00000531041 OR10G7Q8NGN6 311 aa12.69□□□□□ -0.38
SF3B2-211ENST00000531041 NRN1Q9NPD7 142 aa12.69□□□□□ -0.38
SF3B2-211ENST00000531041 FUT9Q9Y231 359 aa12.69□□□□□ -0.38
SF3B2-211ENST00000531041 SMAD5-AS1Q9Y6J3 95 aa12.69□□□□□ -0.38
SF3B2-211ENST00000531041 TRAV5A0A0B4J249 113 aa12.68□□□□□ -0.38
SF3B2-211ENST00000531041 OR4C46A6NHA9 309 aa12.68□□□□□ -0.38
SF3B2-211ENST00000531041 MRPS12O15235 138 aaKnown RBP12.68□□□□□ -0.38
SF3B2-211ENST00000531041 SPATA31B1PQ5VZV4 182 aa12.68□□□□□ -0.38
SF3B2-211ENST00000531041 MIR17HGQ75NE6 70 aa12.68□□□□□ -0.38
SF3B2-211ENST00000531041 GBGT1Q8N5D6 347 aa12.68□□□□□ -0.38
SF3B2-211ENST00000531041 STXBP6Q8NFX7 210 aa12.68□□□□□ -0.38
SF3B2-211ENST00000531041 DCANP1Q8TF63 244 aa12.68□□□□□ -0.38
SF3B2-211ENST00000531041 A0A1W2PPV4 95 aa12.67□□□□□ -0.38
SF3B2-211ENST00000531041 DNASE2O00115 360 aaPredicted RBP12.67□□□□□ -0.38
SF3B2-211ENST00000531041 TMEM41BQ5BJD5 291 aa12.67□□□□□ -0.38
SF3B2-211ENST00000531041 RPP25LQ8N5L8 163 aaKnown RBP12.67□□□□□ -0.38
SF3B2-211ENST00000531041 FAM167A-AS1Q96KT0 104 aa12.67□□□□□ -0.38
SF3B2-211ENST00000531041 RPRMQ9NS64 109 aa12.67□□□□□ -0.38
SF3B2-211ENST00000531041 K7EQG2 157 aa12.66□□□□□ -0.38
SF3B2-211ENST00000531041 TFPI2P48307 235 aa12.66□□□□□ -0.38
SF3B2-211ENST00000531041 C17orf77Q96MU5 243 aa12.66□□□□□ -0.38
SF3B2-211ENST00000531041 PRR25Q96S07 402 aa12.66□□□□□ -0.38
SF3B2-211ENST00000531041 SLC25A2Q9BXI2 301 aa12.66□□□□□ -0.38
SF3B2-211ENST00000531041 TMEM14CQ9P0S9 112 aa12.66□□□□□ -0.38
SF3B2-211ENST00000531041 A0A087X0K7 114 aa12.65□□□□□ -0.38
SF3B2-211ENST00000531041 BOLA2-SMG1P6H3BVE0 249 aa12.65□□□□□ -0.38
SF3B2-211ENST00000531041 ATF4P18848 351 aaPredicted RBP12.65□□□□□ -0.38
SF3B2-211ENST00000531041 MEOX2P50222 304 aa12.65□□□□□ -0.38
SF3B2-211ENST00000531041 AKR1C8PQ5T2L2 129 aa12.65□□□□□ -0.38
SF3B2-211ENST00000531041 FAM122CQ6P4D5 195 aa12.65□□□□□ -0.38
SF3B2-211ENST00000531041 GTSCR1Q86UQ5 136 aa12.65□□□□□ -0.38
SF3B2-211ENST00000531041 WFDC3Q8IUB2 231 aa12.65□□□□□ -0.38
SF3B2-211ENST00000531041 FAM110AQ9BQ89 295 aa12.65□□□□□ -0.38
SF3B2-211ENST00000531041 UMAD1C9J7I0 102 aa12.64□□□□□ -0.39
SF3B2-211ENST00000531041 CD7P09564 240 aa12.64□□□□□ -0.39
SF3B2-211ENST00000531041 IGLC2P0DOY2 106 aa12.64□□□□□ -0.39
SF3B2-211ENST00000531041 CDC34P49427 236 aaPredicted RBP12.64□□□□□ -0.39
SF3B2-211ENST00000531041 TAS2R45P59539 299 aa12.64□□□□□ -0.39
SF3B2-211ENST00000531041 KHDC3LQ587J8 217 aa12.64□□□□□ -0.39
SF3B2-211ENST00000531041 SAMD13Q5VXD3 122 aa12.64□□□□□ -0.39
SF3B2-211ENST00000531041 EIF5AL1Q6IS14 154 aaKnown RBP12.64□□□□□ -0.39
SF3B2-211ENST00000531041 TMED6Q8WW62 240 aa12.64□□□□□ -0.39
SF3B2-211ENST00000531041 HRH4Q9H3N8 390 aa12.64□□□□□ -0.39
SF3B2-211ENST00000531041 SOCS3O14543 225 aa12.63□□□□□ -0.39
SF3B2-211ENST00000531041 CMC4P56277 68 aaPredicted RBP12.63□□□□□ -0.39
SF3B2-211ENST00000531041 CD81P60033 236 aa12.63□□□□□ -0.39
SF3B2-211ENST00000531041 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.63□□□□□ -0.39
SF3B2-211ENST00000531041 Q8N1Y9 231 aa12.63□□□□□ -0.39
SF3B2-211ENST00000531041 RAB24Q969Q5 203 aa12.63□□□□□ -0.39
SF3B2-211ENST00000531041 ACTR3CQ9C0K3 210 aaPredicted RBP12.63□□□□□ -0.39
SF3B2-211ENST00000531041 OR51M1Q9H341 326 aa12.63□□□□□ -0.39
SF3B2-211ENST00000531041 AURKAIP1Q9NWT8 199 aaPredicted RBP12.63□□□□□ -0.39
SF3B2-211ENST00000531041 PLA2G2EQ9NZK7 142 aa12.63□□□□□ -0.39
SF3B2-211ENST00000531041 BOLA1Q9Y3E2 137 aa12.63□□□□□ -0.39
SF3B2-211ENST00000531041 DNAH3Q8TD57 4116 aa12.63□□□□□ -0.39
SF3B2-211ENST00000531041 H3BQ15 152 aa12.62□□□□□ -0.39
SF3B2-211ENST00000531041 HIST1H1EP10412 219 aaKnown RBP12.62□□□□□ -0.39
SF3B2-211ENST00000531041 GUK1Q16774 197 aa12.62□□□□□ -0.39
SF3B2-211ENST00000531041 FAM24BQ8N5W8 94 aa12.62□□□□□ -0.39
SF3B2-211ENST00000531041 C19orf73Q9NVV2 129 aa12.62□□□□□ -0.39
SF3B2-211ENST00000531041 ISLRO14498 428 aa12.62□□□□□ -0.39
SF3B2-211ENST00000531041 OR7C2O60412 319 aa12.62□□□□□ -0.39
SF3B2-211ENST00000531041 STAG3L2P0CL84 134 aa12.62□□□□□ -0.39
SF3B2-211ENST00000531041 STAG3L3P0CL85 134 aa12.62□□□□□ -0.39
SF3B2-211ENST00000531041 PYYP10082 97 aa12.62□□□□□ -0.39
SF3B2-211ENST00000531041 ODF3L2Q3SX64 289 aa12.62□□□□□ -0.39
SF3B2-211ENST00000531041 LCN15Q6UWW0 184 aa12.62□□□□□ -0.39
SF3B2-211ENST00000531041 PQLC2Q6ZP29 291 aa12.62□□□□□ -0.39
SF3B2-211ENST00000531041 ZNF503Q96F45 646 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms