RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 ACOT7LQ6ZUV0 252 aa11.19□□□□□ -0.62
CHMP4A-204ENST00000530996 OR11H7Q8NGC8 314 aa11.19□□□□□ -0.62
CHMP4A-204ENST00000530996 DYNC2LI1Q8TCX1 351 aa11.19□□□□□ -0.62
CHMP4A-204ENST00000530996 PPP1R14DQ9NXH3 145 aa11.19□□□□□ -0.62
CHMP4A-204ENST00000530996 SLC45A2Q9UMX9 530 aa11.19□□□□□ -0.62
CHMP4A-204ENST00000530996 LYRM9A8MSI8 78 aa11.18□□□□□ -0.62
CHMP4A-204ENST00000530996 F5H768 121 aa11.18□□□□□ -0.62
CHMP4A-204ENST00000530996 SYNGR2O43760 224 aa11.18□□□□□ -0.62
CHMP4A-204ENST00000530996 PITX3O75364 302 aa11.18□□□□□ -0.62
CHMP4A-204ENST00000530996 NUDT3O95989 172 aa11.18□□□□□ -0.62
CHMP4A-204ENST00000530996 ALDH3B2P48448 385 aa11.18□□□□□ -0.62
CHMP4A-204ENST00000530996 HIST1H1AQ02539 215 aaPredicted RBP11.18□□□□□ -0.62
CHMP4A-204ENST00000530996 AMTNQ6UX39 209 aa11.18□□□□□ -0.62
CHMP4A-204ENST00000530996 TOMM5Q8N4H5 51 aa11.18□□□□□ -0.62
CHMP4A-204ENST00000530996 RYR1P21817 5038 aa11.18□□□□□ -0.62
CHMP4A-204ENST00000530996 TRAV12-2A0A075B6T6 113 aa11.17□□□□□ -0.62
CHMP4A-204ENST00000530996 BOLA2-SMG1P6H3BVE0 249 aa11.17□□□□□ -0.62
CHMP4A-204ENST00000530996 PRM2P04554 102 aa11.17□□□□□ -0.62
CHMP4A-204ENST00000530996 HOXB5P09067 269 aa11.17□□□□□ -0.62
CHMP4A-204ENST00000530996 SLC25A6P12236 298 aa11.17□□□□□ -0.62
CHMP4A-204ENST00000530996 FAM3BP58499 235 aaPredicted RBP11.17□□□□□ -0.62
CHMP4A-204ENST00000530996 RAP2BP61225 183 aa11.17□□□□□ -0.62
CHMP4A-204ENST00000530996 RHOBP62745 196 aa11.17□□□□□ -0.62
CHMP4A-204ENST00000530996 PYDC2Q56P42 97 aa11.17□□□□□ -0.62
CHMP4A-204ENST00000530996 MCFD2Q8NI22 146 aa11.17□□□□□ -0.62
CHMP4A-204ENST00000530996 SLC25A39Q9BZJ4 359 aaPredicted RBP11.17□□□□□ -0.62
CHMP4A-204ENST00000530996 STRAPQ9Y3F4 350 aaKnown RBP11.17□□□□□ -0.62
CHMP4A-204ENST00000530996 A8MTW9 85 aa11.16□□□□□ -0.62
CHMP4A-204ENST00000530996 C16orf90A8MZG2 172 aa11.16□□□□□ -0.62
CHMP4A-204ENST00000530996 HTN1P15515 57 aa11.16□□□□□ -0.62
CHMP4A-204ENST00000530996 TNFSF8P32971 234 aa11.16□□□□□ -0.62
CHMP4A-204ENST00000530996 B2MP61769 119 aa11.16□□□□□ -0.62
CHMP4A-204ENST00000530996 OR4D5Q8NGN0 318 aa11.16□□□□□ -0.62
CHMP4A-204ENST00000530996 LRRC20Q8TCA0 184 aa11.16□□□□□ -0.62
CHMP4A-204ENST00000530996 HIGD1AQ9Y241 93 aa11.16□□□□□ -0.62
CHMP4A-204ENST00000530996 PRSS46E5RG02 174 aa11.15□□□□□ -0.62
CHMP4A-204ENST00000530996 H3BRN7 92 aa11.15□□□□□ -0.62
CHMP4A-204ENST00000530996 IL5P05113 134 aa11.15□□□□□ -0.62
CHMP4A-204ENST00000530996 OR5G3P0C626 314 aa11.15□□□□□ -0.62
CHMP4A-204ENST00000530996 TMBIM6P55061 237 aa11.15□□□□□ -0.62
CHMP4A-204ENST00000530996 PPP1R1AQ13522 171 aa11.15□□□□□ -0.62
CHMP4A-204ENST00000530996 BCL7BQ9BQE9 202 aa11.15□□□□□ -0.62
CHMP4A-204ENST00000530996 TRAV8-2A0A0B4J237 113 aa11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 CRXO43186 299 aaPredicted RBP11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 SFT2D2O95562 160 aa11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 ATP5G1P05496 136 aa11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 LINC00869P0C866 280 aa11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 RPL7P18124 248 aaKnown RBP11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 ATP5G3P48201 142 aa11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 CLINT1Q14677 625 aa11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 TMEM182Q6ZP80 229 aaPredicted RBP11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 CYP2G1PQ6ZSU1 146 aa11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 LRTM2Q8N967 370 aa11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 TRIM63Q969Q1 353 aa11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 C17orf77Q96MU5 243 aa11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 LINC01587Q99440 93 aa11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 SLIRPQ9GZT3 109 aaKnown RBP11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 ABCA13Q86UQ4 5058 aa11.14□□□□□ -0.63
CHMP4A-204ENST00000530996 NBDYA0A0U1RRE5 68 aa11.13□□□□□ -0.63
CHMP4A-204ENST00000530996 SSSCA1O60232 199 aa11.13□□□□□ -0.63
CHMP4A-204ENST00000530996 PRB4P10163 310 aaPredicted RBP11.13□□□□□ -0.63
CHMP4A-204ENST00000530996 TSPOP30536 169 aa11.13□□□□□ -0.63
CHMP4A-204ENST00000530996 CCL18P55774 89 aa11.13□□□□□ -0.63
CHMP4A-204ENST00000530996 TNP2Q05952 138 aa11.13□□□□□ -0.63
CHMP4A-204ENST00000530996 FCN2Q15485 313 aa11.13□□□□□ -0.63
CHMP4A-204ENST00000530996 S100A7AQ86SG5 101 aa11.13□□□□□ -0.63
CHMP4A-204ENST00000530996 C6orf223Q8N319 242 aa11.13□□□□□ -0.63
CHMP4A-204ENST00000530996 UHRF2Q96PU4 802 aa11.13□□□□□ -0.63
CHMP4A-204ENST00000530996 SLC25A21Q9BQT8 299 aaPredicted RBP11.13□□□□□ -0.63
CHMP4A-204ENST00000530996 SHANK2-AS3Q9BTD1 123 aa11.13□□□□□ -0.63
CHMP4A-204ENST00000530996 DNAH11Q96DT5 4516 aa11.12□□□□□ -0.63
CHMP4A-204ENST00000530996 H3BMQ9 156 aa11.12□□□□□ -0.63
CHMP4A-204ENST00000530996 HYPMO75409 117 aa11.12□□□□□ -0.63
CHMP4A-204ENST00000530996 AZU1P20160 251 aa11.12□□□□□ -0.63
CHMP4A-204ENST00000530996 RRAS2P62070 204 aaPredicted RBP11.12□□□□□ -0.63
CHMP4A-204ENST00000530996 TMEM144Q7Z5S9 345 aa11.12□□□□□ -0.63
CHMP4A-204ENST00000530996 TMEM256Q8N2U0 113 aa11.12□□□□□ -0.63
CHMP4A-204ENST00000530996 OR8A1Q8NGG7 326 aa11.12□□□□□ -0.63
CHMP4A-204ENST00000530996 C16orf74Q96GX8 76 aa11.12□□□□□ -0.63
CHMP4A-204ENST00000530996 DYNC1H1Q14204 4646 aaKnown RBP11.12□□□□□ -0.63
CHMP4A-204ENST00000530996 DNAH17Q9UFH2 4485 aa11.11□□□□□ -0.63
CHMP4A-204ENST00000530996 SCGB1D2O95969 90 aa11.11□□□□□ -0.63
CHMP4A-204ENST00000530996 POLR2GP62487 172 aaKnown RBP eCLIP11.11□□□□□ -0.63
CHMP4A-204ENST00000530996 ZNRF2Q8NHG8 242 aa11.11□□□□□ -0.63
CHMP4A-204ENST00000530996 SOSTQ9BQB4 213 aa11.11□□□□□ -0.63
CHMP4A-204ENST00000530996 PSENENQ9NZ42 101 aa11.11□□□□□ -0.63
CHMP4A-204ENST00000530996 ADAP1O75689 374 aa11.1□□□□□ -0.63
CHMP4A-204ENST00000530996 CXCL3P19876 107 aa11.1□□□□□ -0.63
CHMP4A-204ENST00000530996 ANXA7P20073 488 aaKnown RBP11.1□□□□□ -0.63
CHMP4A-204ENST00000530996 TAS2R60P59551 318 aa11.1□□□□□ -0.63
CHMP4A-204ENST00000530996 RNF141Q8WVD5 230 aa11.1□□□□□ -0.63
CHMP4A-204ENST00000530996 MGAT4CQ9UBM8 478 aa11.1□□□□□ -0.63
CHMP4A-204ENST00000530996 TIMM8BQ9Y5J9 83 aaPredicted RBP11.1□□□□□ -0.63
CHMP4A-204ENST00000530996 PLAC8L1A1L4L8 177 aa11.09□□□□□ -0.63
CHMP4A-204ENST00000530996 CBY3A6NI87 242 aa11.09□□□□□ -0.63
CHMP4A-204ENST00000530996 S100A5P33763 92 aa11.09□□□□□ -0.63
CHMP4A-204ENST00000530996 INPP1P49441 399 aa11.09□□□□□ -0.63
CHMP4A-204ENST00000530996 SELENOTP62341 195 aa11.09□□□□□ -0.63
CHMP4A-204ENST00000530996 PSG3Q16557 428 aa11.09□□□□□ -0.63
CHMP4A-204ENST00000530996 RPUSD4Q96CM3 377 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms