RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 K7EQG2 157 aa15.9■□□□□ 0.14
CAPN1-220ENST00000530567 S100A7P31151 101 aa15.9■□□□□ 0.14
CAPN1-220ENST00000530567 PAFAH1B2P68402 229 aa15.9■□□□□ 0.14
CAPN1-220ENST00000530567 MRAPQ8TCY5 172 aa15.9■□□□□ 0.14
CAPN1-220ENST00000530567 PFDN5Q99471 154 aa15.9■□□□□ 0.14
CAPN1-220ENST00000530567 CYTL1Q9NRR1 136 aa15.9■□□□□ 0.14
CAPN1-220ENST00000530567 SMAD5-AS1Q9Y6J3 95 aa15.9■□□□□ 0.14
CAPN1-220ENST00000530567 C1QBP02746 253 aa15.89■□□□□ 0.13
CAPN1-220ENST00000530567 WFDC3Q8IUB2 231 aa15.89■□□□□ 0.13
CAPN1-220ENST00000530567 HSD17B11Q8NBQ5 300 aa15.89■□□□□ 0.13
CAPN1-220ENST00000530567 GATAD1Q8WUU5 269 aa15.89■□□□□ 0.13
CAPN1-220ENST00000530567 NRN1Q9NPD7 142 aa15.89■□□□□ 0.13
CAPN1-220ENST00000530567 TIMM9Q9Y5J7 89 aa15.89■□□□□ 0.13
CAPN1-220ENST00000530567 MRPS12O15235 138 aaKnown RBP15.88■□□□□ 0.13
CAPN1-220ENST00000530567 S100A7AQ86SG5 101 aa15.88■□□□□ 0.13
CAPN1-220ENST00000530567 DNASE2O00115 360 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-220ENST00000530567 TAAR5O14804 337 aa15.87■□□□□ 0.13
CAPN1-220ENST00000530567 ATP6V0CP27449 155 aa15.87■□□□□ 0.13
CAPN1-220ENST00000530567 FFAR4Q5NUL3 377 aa15.87■□□□□ 0.13
CAPN1-220ENST00000530567 GPR82Q96P67 336 aa15.87■□□□□ 0.13
CAPN1-220ENST00000530567 UBQLN2Q9UHD9 624 aa15.87■□□□□ 0.13
CAPN1-220ENST00000530567 TRAV5A0A0B4J249 113 aa15.86■□□□□ 0.13
CAPN1-220ENST00000530567 SOCS3O14543 225 aa15.86■□□□□ 0.13
CAPN1-220ENST00000530567 RPL7P18124 248 aaKnown RBP15.86■□□□□ 0.13
CAPN1-220ENST00000530567 GALR1P47211 349 aa15.86■□□□□ 0.13
CAPN1-220ENST00000530567 FAM110AQ9BQ89 295 aa15.86■□□□□ 0.13
CAPN1-220ENST00000530567 SH3BGRL3Q9H299 93 aa15.86■□□□□ 0.13
CAPN1-220ENST00000530567 MAP6D1Q9H9H5 199 aa15.86■□□□□ 0.13
CAPN1-220ENST00000530567 SEPSECSQ9HD40 501 aaKnown RBP15.86■□□□□ 0.13
CAPN1-220ENST00000530567 BORCS7-ASMTA0A0B4J1R7 106 aa15.85■□□□□ 0.13
CAPN1-220ENST00000530567 A0A0D9SG52 128 aa15.85■□□□□ 0.13
CAPN1-220ENST00000530567 OR11H12B2RN74 326 aa15.85■□□□□ 0.13
CAPN1-220ENST00000530567 IGHV4-30-4P0DP06 118 aa15.85■□□□□ 0.13
CAPN1-220ENST00000530567 SPATA31B1PQ5VZV4 182 aa15.85■□□□□ 0.13
CAPN1-220ENST00000530567 DEFB125Q8N687 156 aa15.85■□□□□ 0.13
CAPN1-220ENST00000530567 OR2G3Q8NGZ4 309 aa15.85■□□□□ 0.13
CAPN1-220ENST00000530567 PSMG3Q9BT73 122 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-220ENST00000530567 FAM78BQ5VT40 261 aa15.85■□□□□ 0.13
CAPN1-220ENST00000530567 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.85■□□□□ 0.13
CAPN1-220ENST00000530567 CITED4Q96RK1 184 aa15.85■□□□□ 0.13
CAPN1-220ENST00000530567 ARPC5LQ9BPX5 153 aa15.85■□□□□ 0.13
CAPN1-220ENST00000530567 RNF24Q9Y225 148 aa15.85■□□□□ 0.13
CAPN1-220ENST00000530567 A8MZ25 164 aa15.84■□□□□ 0.13
CAPN1-220ENST00000530567 BCL2L11O43521 198 aa15.84■□□□□ 0.13
CAPN1-220ENST00000530567 JTBO76095 146 aa15.84■□□□□ 0.13
CAPN1-220ENST00000530567 ZNF688P0C7X2 276 aa15.84■□□□□ 0.13
CAPN1-220ENST00000530567 LGALSLQ3ZCW2 172 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-220ENST00000530567 DEFB121Q5J5C9 76 aa15.84■□□□□ 0.13
CAPN1-220ENST00000530567 MIR17HGQ75NE6 70 aa15.84■□□□□ 0.13
CAPN1-220ENST00000530567 A0A087X0K7 114 aa15.83■□□□□ 0.12
CAPN1-220ENST00000530567 ZNF124Q15973 351 aa15.83■□□□□ 0.12
CAPN1-220ENST00000530567 FAM167A-AS1Q96KT0 104 aa15.83■□□□□ 0.12
CAPN1-220ENST00000530567 HYLS1Q96M11 299 aa15.83■□□□□ 0.12
CAPN1-220ENST00000530567 IGLC2P0DOY2 106 aa15.82■□□□□ 0.12
CAPN1-220ENST00000530567 DEFB131AP59861 70 aa15.82■□□□□ 0.12
CAPN1-220ENST00000530567 RAB2AP61019 212 aa15.82■□□□□ 0.12
CAPN1-220ENST00000530567 TMUB2Q71RG4 321 aa15.82■□□□□ 0.12
CAPN1-220ENST00000530567 BPIFA4PQ86YQ2 179 aa15.82■□□□□ 0.12
CAPN1-220ENST00000530567 APRG1Q8IVJ8 170 aa15.82■□□□□ 0.12
CAPN1-220ENST00000530567 SLC25A2Q9BXI2 301 aa15.82■□□□□ 0.12
CAPN1-220ENST00000530567 MRPL32Q9BYC8 188 aaKnown RBP15.82■□□□□ 0.12
CAPN1-220ENST00000530567 ATF4P18848 351 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-220ENST00000530567 M6PRP20645 277 aa15.81■□□□□ 0.12
CAPN1-220ENST00000530567 MEOX2P50222 304 aa15.81■□□□□ 0.12
CAPN1-220ENST00000530567 ACOT6Q3I5F7 207 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-220ENST00000530567 GNPNAT1Q96EK6 184 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-220ENST00000530567 SRD5A3Q9H8P0 318 aa15.81■□□□□ 0.12
CAPN1-220ENST00000530567 FUT9Q9Y231 359 aa15.81■□□□□ 0.12
CAPN1-220ENST00000530567 FRMD6-AS1P0C7T7 363 aa15.8■□□□□ 0.12
CAPN1-220ENST00000530567 CMC4P56277 68 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-220ENST00000530567 SERF2P84101 59 aa15.8■□□□□ 0.12
CAPN1-220ENST00000530567 TMEM14CQ9P0S9 112 aa15.8■□□□□ 0.12
CAPN1-220ENST00000530567 TRAV8-2A0A0B4J237 113 aa15.79■□□□□ 0.12
CAPN1-220ENST00000530567 KANTRA0A1W2PQU2 76 aa15.79■□□□□ 0.12
CAPN1-220ENST00000530567 H3BQ15 152 aa15.79■□□□□ 0.12
CAPN1-220ENST00000530567 ISLRO14498 428 aa15.79■□□□□ 0.12
CAPN1-220ENST00000530567 SNRPCP09234 159 aaKnown RBP15.79■□□□□ 0.12
CAPN1-220ENST00000530567 PSMB3P49720 205 aa15.79■□□□□ 0.12
CAPN1-220ENST00000530567 ZFP69Q49AA0 526 aa15.79■□□□□ 0.12
CAPN1-220ENST00000530567 PSMG4Q5JS54 123 aa15.79■□□□□ 0.12
CAPN1-220ENST00000530567 LINC00322Q6ZN03 302 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-220ENST00000530567 RBMY1BA6NDE4 496 aaKnown RBP15.78■□□□□ 0.12
CAPN1-220ENST00000530567 RBMY1EA6NEQ0 496 aaKnown RBP15.78■□□□□ 0.12
CAPN1-220ENST00000530567 EIF3GO75821 320 aaKnown RBP eCLIP15.78■□□□□ 0.12
CAPN1-220ENST00000530567 RBMY1DP0C7P1 496 aaKnown RBP15.78■□□□□ 0.12
CAPN1-220ENST00000530567 PYYP10082 97 aa15.78■□□□□ 0.12
CAPN1-220ENST00000530567 SPP1P10451 314 aa15.78■□□□□ 0.12
CAPN1-220ENST00000530567 RHOBP62745 196 aa15.78■□□□□ 0.12
CAPN1-220ENST00000530567 SAMD13Q5VXD3 122 aa15.78■□□□□ 0.12
CAPN1-220ENST00000530567 C9orf62Q8N4C0 152 aa15.78■□□□□ 0.12
CAPN1-220ENST00000530567 C20orf173Q96LM9 149 aa15.78■□□□□ 0.12
CAPN1-220ENST00000530567 ZNF471Q9BX82 626 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-220ENST00000530567 HRH4Q9H3N8 390 aa15.78■□□□□ 0.12
CAPN1-220ENST00000530567 TUBA4BQ9H853 241 aa15.78■□□□□ 0.12
CAPN1-220ENST00000530567 PFDN1O60925 122 aa15.77■□□□□ 0.12
CAPN1-220ENST00000530567 SNRPD3P62318 126 aaKnown RBP15.77■□□□□ 0.12
CAPN1-220ENST00000530567 RPP25LQ8N5L8 163 aaKnown RBP15.77■□□□□ 0.12
CAPN1-220ENST00000530567 OR10G4Q8NGN3 311 aa15.77■□□□□ 0.12
CAPN1-220ENST00000530567 OR10G9Q8NGN4 311 aa15.77■□□□□ 0.12
CAPN1-220ENST00000530567 OR10G7Q8NGN6 311 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms