RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 NPFFR1Q9GZQ6 430 aa11.69□□□□□ -0.54
CAPN1-214ENST00000528165 TPSG1Q9NRR2 321 aa11.69□□□□□ -0.54
CAPN1-214ENST00000528165 INTS1Q8N201 2190 aaKnown RBP11.69□□□□□ -0.54
CAPN1-214ENST00000528165 CCL3L1P16619 93 aa11.68□□□□□ -0.54
CAPN1-214ENST00000528165 LYZP61626 148 aa11.68□□□□□ -0.54
CAPN1-214ENST00000528165 DIAPH2-AS1Q14236 149 aa11.68□□□□□ -0.54
CAPN1-214ENST00000528165 CACNA1GO43497 2377 aa11.68□□□□□ -0.54
CAPN1-214ENST00000528165 SERTM2A0A1B0GWG4 89 aa11.68□□□□□ -0.54
CAPN1-214ENST00000528165 FABP2P12104 132 aa11.68□□□□□ -0.54
CAPN1-214ENST00000528165 TMEM186Q96B77 213 aa11.68□□□□□ -0.54
CAPN1-214ENST00000528165 SIGLEC8Q9NYZ4 499 aa11.68□□□□□ -0.54
CAPN1-214ENST00000528165 IGLV3-9A0A075B6K5 115 aa11.68□□□□□ -0.54
CAPN1-214ENST00000528165 D6R8Y8 96 aa11.68□□□□□ -0.54
CAPN1-214ENST00000528165 IGHV1-46P01743 117 aa11.68□□□□□ -0.54
CAPN1-214ENST00000528165 TNFRSF1AP19438 455 aa11.68□□□□□ -0.54
CAPN1-214ENST00000528165 NMUP48645 174 aa11.68□□□□□ -0.54
CAPN1-214ENST00000528165 RBPJQ06330 500 aa11.68□□□□□ -0.54
CAPN1-214ENST00000528165 Q6AWC8 147 aa11.68□□□□□ -0.54
CAPN1-214ENST00000528165 SMIM17P0DL12 118 aa11.67□□□□□ -0.54
CAPN1-214ENST00000528165 APELAP0DMC3 54 aa11.67□□□□□ -0.54
CAPN1-214ENST00000528165 CLEC2AQ6UVW9 174 aa11.67□□□□□ -0.54
CAPN1-214ENST00000528165 ZNF414Q96IQ9 312 aa11.67□□□□□ -0.54
CAPN1-214ENST00000528165 PLXNB1O43157 2135 aa11.67□□□□□ -0.54
CAPN1-214ENST00000528165 TRBV6-1A0A0K0K1D8 114 aa11.67□□□□□ -0.54
CAPN1-214ENST00000528165 ZNF785A8K8V0 405 aa11.67□□□□□ -0.54
CAPN1-214ENST00000528165 HOXB4P17483 251 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-214ENST00000528165 TMEM14CQ9P0S9 112 aa11.67□□□□□ -0.54
CAPN1-214ENST00000528165 K7EQM0 130 aa11.66□□□□□ -0.54
CAPN1-214ENST00000528165 PRELID3AQ96N28 172 aa11.66□□□□□ -0.54
CAPN1-214ENST00000528165 ASCL2Q99929 193 aa11.66□□□□□ -0.54
CAPN1-214ENST00000528165 SPOCK3Q9BQ16 436 aa11.66□□□□□ -0.54
CAPN1-214ENST00000528165 HBDP02042 147 aa11.66□□□□□ -0.54
CAPN1-214ENST00000528165 RPL24P83731 157 aaKnown RBP11.66□□□□□ -0.54
CAPN1-214ENST00000528165 MEF2CQ06413 473 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-214ENST00000528165 SAMD13Q5VXD3 122 aa11.66□□□□□ -0.54
CAPN1-214ENST00000528165 PRSS57Q6UWY2 283 aa11.66□□□□□ -0.54
CAPN1-214ENST00000528165 TMEM75Q8N9X5 138 aa11.66□□□□□ -0.54
CAPN1-214ENST00000528165 SLC25A39Q9BZJ4 359 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-214ENST00000528165 INSIG2Q9Y5U4 225 aa11.66□□□□□ -0.54
CAPN1-214ENST00000528165 SVILO95425 2214 aa11.66□□□□□ -0.54
CAPN1-214ENST00000528165 ENSAO43768 121 aaKnown RBP11.65□□□□□ -0.54
CAPN1-214ENST00000528165 PCP2Q8IVA1 136 aa11.65□□□□□ -0.54
CAPN1-214ENST00000528165 ABHD17AQ96GS6 310 aa11.65□□□□□ -0.54
CAPN1-214ENST00000528165 F11RQ9Y624 299 aaKnown RBP11.65□□□□□ -0.54
CAPN1-214ENST00000528165 CEACAM3P40198 252 aa11.65□□□□□ -0.54
CAPN1-214ENST00000528165 FXYD7P58549 80 aa11.65□□□□□ -0.54
CAPN1-214ENST00000528165 SAMD5Q5TGI4 173 aa11.65□□□□□ -0.54
CAPN1-214ENST00000528165 TEX36Q5VZQ5 186 aa11.65□□□□□ -0.54
CAPN1-214ENST00000528165 ZNF493Q6ZR52 646 aa11.65□□□□□ -0.54
CAPN1-214ENST00000528165 ORMDL3Q8N138 153 aa11.65□□□□□ -0.54
CAPN1-214ENST00000528165 IFI27L1Q96BM0 104 aa11.65□□□□□ -0.54
CAPN1-214ENST00000528165 DSPP15924 2871 aaKnown RBP11.65□□□□□ -0.55
CAPN1-214ENST00000528165 SMIM13P0DJ93 91 aa11.64□□□□□ -0.55
CAPN1-214ENST00000528165 RPL27AP46776 148 aaKnown RBP11.64□□□□□ -0.55
CAPN1-214ENST00000528165 LGALS7P47929 136 aa11.64□□□□□ -0.55
CAPN1-214ENST00000528165 TIMM23BQ5SRD1 257 aa11.64□□□□□ -0.55
CAPN1-214ENST00000528165 RITA1Q96K30 269 aa11.64□□□□□ -0.55
CAPN1-214ENST00000528165 PSG8Q9UQ74 426 aa11.64□□□□□ -0.55
CAPN1-214ENST00000528165 TM4SF20Q53R12 229 aa11.64□□□□□ -0.55
CAPN1-214ENST00000528165 TMEM200BQ69YZ2 307 aa11.64□□□□□ -0.55
CAPN1-214ENST00000528165 PVRIGQ6DKI7 326 aa11.64□□□□□ -0.55
CAPN1-214ENST00000528165 UBALD2Q8IYN6 164 aa11.64□□□□□ -0.55
CAPN1-214ENST00000528165 AMN1Q8IY45 258 aa11.64□□□□□ -0.55
CAPN1-214ENST00000528165 GNG7O60262 68 aa11.63□□□□□ -0.55
CAPN1-214ENST00000528165 CT45A10P0DMU9 189 aa11.63□□□□□ -0.55
CAPN1-214ENST00000528165 PRB4P10163 310 aaPredicted RBP11.63□□□□□ -0.55
CAPN1-214ENST00000528165 MC5RP33032 325 aa11.63□□□□□ -0.55
CAPN1-214ENST00000528165 MRGPRG-AS1Q2M3A8 158 aa11.63□□□□□ -0.55
CAPN1-214ENST00000528165 FAM104BQ5XKR9 115 aa11.63□□□□□ -0.55
CAPN1-214ENST00000528165 U3KQK5 164 aa11.63□□□□□ -0.55
CAPN1-214ENST00000528165 IGHV3-72A0A0B4J1Y9 119 aa11.63□□□□□ -0.55
CAPN1-214ENST00000528165 TMEM213A2RRL7 107 aa11.63□□□□□ -0.55
CAPN1-214ENST00000528165 PSG3Q16557 428 aa11.63□□□□□ -0.55
CAPN1-214ENST00000528165 C1orf185Q5T7R7 199 aa11.63□□□□□ -0.55
CAPN1-214ENST00000528165 NGBQ9NPG2 151 aa11.63□□□□□ -0.55
CAPN1-214ENST00000528165 TRBV19A0A075B6N1 114 aa11.62□□□□□ -0.55
CAPN1-214ENST00000528165 GCSHP23434 173 aa11.62□□□□□ -0.55
CAPN1-214ENST00000528165 CRIP1P50238 77 aa11.62□□□□□ -0.55
CAPN1-214ENST00000528165 LYZL1Q6UWQ5 148 aa11.62□□□□□ -0.55
CAPN1-214ENST00000528165 SCNM1Q9BWG6 230 aa11.62□□□□□ -0.55
CAPN1-214ENST00000528165 RBP4P02753 201 aa11.62□□□□□ -0.55
CAPN1-214ENST00000528165 CCL11P51671 97 aa11.62□□□□□ -0.55
CAPN1-214ENST00000528165 CCL8P80075 99 aa11.62□□□□□ -0.55
CAPN1-214ENST00000528165 RASL11BQ9BPW5 248 aa11.62□□□□□ -0.55
CAPN1-214ENST00000528165 TMSB15BA0A087X1C1 80 aa11.61□□□□□ -0.55
CAPN1-214ENST00000528165 TEX48A0A1B0GUV7 120 aa11.61□□□□□ -0.55
CAPN1-214ENST00000528165 ZNF883P0CG24 379 aa11.61□□□□□ -0.55
CAPN1-214ENST00000528165 TMEM190Q8WZ59 177 aa11.61□□□□□ -0.55
CAPN1-214ENST00000528165 C17orf77Q96MU5 243 aa11.61□□□□□ -0.55
CAPN1-214ENST00000528165 ABCA1O95477 2261 aa11.61□□□□□ -0.55
CAPN1-214ENST00000528165 PPIAL4CA0A0B4J2A2 164 aa11.61□□□□□ -0.55
CAPN1-214ENST00000528165 PPIAL4GP0DN37 164 aa11.61□□□□□ -0.55
CAPN1-214ENST00000528165 LINC00311Q8N616 119 aa11.61□□□□□ -0.55
CAPN1-214ENST00000528165 DKK2Q9UBU2 259 aa11.61□□□□□ -0.55
CAPN1-214ENST00000528165 PLCE1Q9P212 2302 aa11.61□□□□□ -0.55
CAPN1-214ENST00000528165 NKX2-8O15522 239 aa11.6□□□□□ -0.55
CAPN1-214ENST00000528165 NDUFS7O75251 213 aa11.6□□□□□ -0.55
CAPN1-214ENST00000528165 BCL6BQ8N143 479 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-214ENST00000528165 TMEM133Q9H2Q1 129 aa11.6□□□□□ -0.55
CAPN1-214ENST00000528165 TMEM189A5PLL7 270 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms