RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 TMEM231Q9H6L2 316 aa8.67□□□□□ -1.02
CCDC90B-210ENST00000528149 CYTL1Q9NRR1 136 aa8.67□□□□□ -1.02
CCDC90B-210ENST00000528149 KCNIP2Q9NS61 270 aa8.67□□□□□ -1.02
CCDC90B-210ENST00000528149 TECRQ9NZ01 308 aaKnown RBP8.67□□□□□ -1.02
CCDC90B-210ENST00000528149 PLECQ15149 4684 aaKnown RBP8.67□□□□□ -1.02
CCDC90B-210ENST00000528149 ALMS1Q8TCU4 4167 aa8.67□□□□□ -1.02
CCDC90B-210ENST00000528149 A0A0D9SG52 128 aa8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 A0A1W2PS18 150 aa8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 C17orf112F2Z3M2 114 aa8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 PFDN1O60925 122 aa8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 ATP6V0CP27449 155 aa8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 GUCA2BQ16661 112 aa8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 LGALSLQ3ZCW2 172 aaPredicted RBP8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 MORN5Q5VZ52 161 aa8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 C10orf113Q5VZT2 155 aa8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 LCN12Q6JVE5 192 aa8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 C16orf54Q6UWD8 224 aa8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 Q6ZRG5 221 aa8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 HYLS1Q96M11 299 aa8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 SHANK2-AS3Q9BTD1 123 aa8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 SLC25A32Q9H2D1 315 aa8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 SLC25A22Q9H936 323 aa8.66□□□□□ -1.02
CCDC90B-210ENST00000528149 KANTRA0A1W2PQU2 76 aa8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 ZNF98A6NK75 572 aa8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 TAAR5O14804 337 aa8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 BUB3O43684 328 aa8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 RPL11P62913 178 aaKnown RBP8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 PXDC1Q5TGL8 231 aa8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 RBPMS2Q6ZRY4 209 aaKnown RBP8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 LINC00305Q7Z4B0 112 aa8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 C9orf62Q8N4C0 152 aa8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 GBGT1Q8N5D6 347 aa8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 OR1L4Q8NGR5 311 aa8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 OR2K2Q8NGT1 345 aa8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 TMEM37Q8WXS4 190 aa8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 RCHY1Q96PM5 261 aa8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 ZNF471Q9BX82 626 aaPredicted RBP8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 WFDC10AQ9H1F0 79 aa8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 TIMM9Q9Y5J7 89 aa8.65□□□□□ -1.02
CCDC90B-210ENST00000528149 KIAA1109Q2LD37 5005 aa8.65□□□□□ -1.03
CCDC90B-210ENST00000528149 GP9P14770 177 aa8.64□□□□□ -1.03
CCDC90B-210ENST00000528149 TFPI2P48307 235 aa8.64□□□□□ -1.03
CCDC90B-210ENST00000528149 RAB2AP61019 212 aa8.64□□□□□ -1.03
CCDC90B-210ENST00000528149 SPATA31B1PQ5VZV4 182 aa8.64□□□□□ -1.03
CCDC90B-210ENST00000528149 FAM90A2PQ658T7 463 aa8.64□□□□□ -1.03
CCDC90B-210ENST00000528149 LAMTOR1Q6IAA8 161 aa8.64□□□□□ -1.03
CCDC90B-210ENST00000528149 SIGLEC15Q6ZMC9 328 aa8.64□□□□□ -1.03
CCDC90B-210ENST00000528149 OR8I2Q8N0Y5 310 aa8.64□□□□□ -1.03
CCDC90B-210ENST00000528149 STXBP6Q8NFX7 210 aa8.64□□□□□ -1.03
CCDC90B-210ENST00000528149 PFDN5Q99471 154 aa8.64□□□□□ -1.03
CCDC90B-210ENST00000528149 DNAJC4Q9NNZ3 241 aa8.64□□□□□ -1.03
CCDC90B-210ENST00000528149 PFDN2Q9UHV9 154 aa8.64□□□□□ -1.03
CCDC90B-210ENST00000528149 ZNF256Q9Y2P7 627 aaPredicted RBP8.64□□□□□ -1.03
CCDC90B-210ENST00000528149 HECTD4Q9Y4D8 3996 aa8.63□□□□□ -1.03
CCDC90B-210ENST00000528149 AGRNO00468 2067 aa8.63□□□□□ -1.03
CCDC90B-210ENST00000528149 ELOA3CA0A087WX78 387 aaPredicted RBP8.63□□□□□ -1.03
CCDC90B-210ENST00000528149 TRAV5A0A0B4J249 113 aa8.63□□□□□ -1.03
CCDC90B-210ENST00000528149 TRAV25A0A0B4J276 109 aa8.63□□□□□ -1.03
CCDC90B-210ENST00000528149 ZNF785A8K8V0 405 aa8.63□□□□□ -1.03
CCDC90B-210ENST00000528149 BOLA2-SMG1P6H3BVE0 249 aa8.63□□□□□ -1.03
CCDC90B-210ENST00000528149 TSPAN4O14817 238 aa8.63□□□□□ -1.03
CCDC90B-210ENST00000528149 EIF3GO75821 320 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCDC90B-210ENST00000528149 JTBO76095 146 aa8.63□□□□□ -1.03
CCDC90B-210ENST00000528149 WFDC3Q8IUB2 231 aa8.63□□□□□ -1.03
CCDC90B-210ENST00000528149 PSMG3Q9BT73 122 aaPredicted RBP8.63□□□□□ -1.03
CCDC90B-210ENST00000528149 MS4A6AQ9H2W1 248 aa8.63□□□□□ -1.03
CCDC90B-210ENST00000528149 PLA2G2EQ9NZK7 142 aa8.63□□□□□ -1.03
CCDC90B-210ENST00000528149 HELTA6NFD8 242 aa8.62□□□□□ -1.03
CCDC90B-210ENST00000528149 S100A7P31151 101 aa8.62□□□□□ -1.03
CCDC90B-210ENST00000528149 ACOT6Q3I5F7 207 aaPredicted RBP8.62□□□□□ -1.03
CCDC90B-210ENST00000528149 C1orf194Q5T5A4 169 aa8.62□□□□□ -1.03
CCDC90B-210ENST00000528149 FAM78BQ5VT40 261 aa8.62□□□□□ -1.03
CCDC90B-210ENST00000528149 MIR17HGQ75NE6 70 aa8.62□□□□□ -1.03
CCDC90B-210ENST00000528149 Q8N1Y9 231 aa8.62□□□□□ -1.03
CCDC90B-210ENST00000528149 OR2G3Q8NGZ4 309 aa8.62□□□□□ -1.03
CCDC90B-210ENST00000528149 GATAD1Q8WUU5 269 aa8.62□□□□□ -1.03
CCDC90B-210ENST00000528149 GNPNAT1Q96EK6 184 aaPredicted RBP8.62□□□□□ -1.03
CCDC90B-210ENST00000528149 SPAG8Q99932 426 aaPredicted RBP8.62□□□□□ -1.03
CCDC90B-210ENST00000528149 SEPSECSQ9HD40 501 aaKnown RBP8.62□□□□□ -1.03
CCDC90B-210ENST00000528149 DNASE2O00115 360 aaPredicted RBP8.61□□□□□ -1.03
CCDC90B-210ENST00000528149 CD5P06127 495 aa8.61□□□□□ -1.03
CCDC90B-210ENST00000528149 SNRPCP09234 159 aaKnown RBP8.61□□□□□ -1.03
CCDC90B-210ENST00000528149 CD7P09564 240 aa8.61□□□□□ -1.03
CCDC90B-210ENST00000528149 ATF4P18848 351 aaPredicted RBP8.61□□□□□ -1.03
CCDC90B-210ENST00000528149 M6PRP20645 277 aa8.61□□□□□ -1.03
CCDC90B-210ENST00000528149 GALR1P47211 349 aa8.61□□□□□ -1.03
CCDC90B-210ENST00000528149 CD81P60033 236 aa8.61□□□□□ -1.03
CCDC90B-210ENST00000528149 FAM122CQ6P4D5 195 aa8.61□□□□□ -1.03
CCDC90B-210ENST00000528149 S100A7AQ86SG5 101 aa8.61□□□□□ -1.03
CCDC90B-210ENST00000528149 FAM24BQ8N5W8 94 aa8.61□□□□□ -1.03
CCDC90B-210ENST00000528149 SLC25A2Q9BXI2 301 aa8.61□□□□□ -1.03
CCDC90B-210ENST00000528149 MRPL32Q9BYC8 188 aaKnown RBP8.61□□□□□ -1.03
CCDC90B-210ENST00000528149 UBQLN2Q9UHD9 624 aa8.61□□□□□ -1.03
CCDC90B-210ENST00000528149 SMAD5-AS1Q9Y6J3 95 aa8.61□□□□□ -1.03
CCDC90B-210ENST00000528149 OR4C46A6NHA9 309 aa8.6□□□□□ -1.03
CCDC90B-210ENST00000528149 MRPS12O15235 138 aaKnown RBP8.6□□□□□ -1.03
CCDC90B-210ENST00000528149 SPP1P10451 314 aa8.6□□□□□ -1.03
CCDC90B-210ENST00000528149 TPT1P13693 172 aaKnown RBP8.6□□□□□ -1.03
CCDC90B-210ENST00000528149 RPL7P18124 248 aaKnown RBP8.6□□□□□ -1.03
CCDC90B-210ENST00000528149 RHOBP62745 196 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms