RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 SOCS3O14543 225 aa6.78□□□□□ -1.32
LINC00958-203ENST00000527945 AGPAT2O15120 278 aa6.78□□□□□ -1.32
LINC00958-203ENST00000527945 SPP1P10451 314 aa6.78□□□□□ -1.32
LINC00958-203ENST00000527945 ID1P41134 155 aa6.78□□□□□ -1.32
LINC00958-203ENST00000527945 DEFB131AP59861 70 aa6.78□□□□□ -1.32
LINC00958-203ENST00000527945 DEFB1P60022 68 aa6.78□□□□□ -1.32
LINC00958-203ENST00000527945 CYCSP99999 105 aaKnown RBP6.78□□□□□ -1.32
LINC00958-203ENST00000527945 SPATA31B1PQ5VZV4 182 aa6.78□□□□□ -1.32
LINC00958-203ENST00000527945 TEPPQ6URK8 271 aa6.78□□□□□ -1.32
LINC00958-203ENST00000527945 STHQ8IWL8 128 aa6.78□□□□□ -1.32
LINC00958-203ENST00000527945 CLUHP3Q96NS8 147 aa6.78□□□□□ -1.32
LINC00958-203ENST00000527945 UHRF2Q96PU4 802 aa6.78□□□□□ -1.32
LINC00958-203ENST00000527945 SLC25A32Q9H2D1 315 aa6.78□□□□□ -1.32
LINC00958-203ENST00000527945 E5RGE8 158 aa6.77□□□□□ -1.33
LINC00958-203ENST00000527945 MRPS12O15235 138 aaKnown RBP6.77□□□□□ -1.33
LINC00958-203ENST00000527945 ORM2P19652 201 aa6.77□□□□□ -1.33
LINC00958-203ENST00000527945 GALR1P47211 349 aa6.77□□□□□ -1.33
LINC00958-203ENST00000527945 NUTF2P61970 127 aaKnown RBP6.77□□□□□ -1.33
LINC00958-203ENST00000527945 RAB31Q13636 194 aa6.77□□□□□ -1.33
LINC00958-203ENST00000527945 OPCMLQ14982 345 aa6.77□□□□□ -1.33
LINC00958-203ENST00000527945 MIC13Q5XKP0 118 aa6.77□□□□□ -1.33
LINC00958-203ENST00000527945 OR8I2Q8N0Y5 310 aa6.77□□□□□ -1.33
LINC00958-203ENST00000527945 OR5C1Q8NGR4 320 aa6.77□□□□□ -1.33
LINC00958-203ENST00000527945 OR1B1Q8NGR6 318 aa6.77□□□□□ -1.33
LINC00958-203ENST00000527945 THAP6Q8TBB0 222 aa6.77□□□□□ -1.33
LINC00958-203ENST00000527945 TMEM37Q8WXS4 190 aa6.77□□□□□ -1.33
LINC00958-203ENST00000527945 TMEM147Q9BVK8 224 aa6.77□□□□□ -1.33
LINC00958-203ENST00000527945 MED28Q9H204 178 aa6.77□□□□□ -1.33
LINC00958-203ENST00000527945 UQCC1Q9NVA1 299 aa6.77□□□□□ -1.33
LINC00958-203ENST00000527945 HSPB11Q9Y547 144 aa6.77□□□□□ -1.33
LINC00958-203ENST00000527945 DYNC2H1Q8NCM8 4307 aaKnown RBP6.77□□□□□ -1.33
LINC00958-203ENST00000527945 ZNF98A6NK75 572 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 ISLRO14498 428 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 HYPMO75409 117 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 ZNF688P0C7X2 276 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 RPL35AP18077 110 aaKnown RBP6.76□□□□□ -1.33
LINC00958-203ENST00000527945 S100A11P31949 105 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 PSMB3P49720 205 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 RAP2BP61225 183 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 HBG1P69891 147 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 HBG2P69892 147 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 CLINT1Q14677 625 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 GCSAMLQ5JQS6 135 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 LCE3BQ5TA77 95 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 TRPT1Q86TN4 253 aaKnown RBP6.76□□□□□ -1.33
LINC00958-203ENST00000527945 ZNF546Q86UE3 836 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 PPP1R14BQ96C90 147 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 C20orf173Q96LM9 149 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 SHANK2-AS3Q9BTD1 123 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 C1QTNF4Q9BXJ3 329 aa6.76□□□□□ -1.33
LINC00958-203ENST00000527945 SLC25A39Q9BZJ4 359 aaPredicted RBP6.76□□□□□ -1.33
LINC00958-203ENST00000527945 CSMD3Q7Z407 3707 aa6.75□□□□□ -1.33
LINC00958-203ENST00000527945 ELOA3CA0A087WX78 387 aaPredicted RBP6.75□□□□□ -1.33
LINC00958-203ENST00000527945 TRAV8-2A0A0B4J237 113 aa6.75□□□□□ -1.33
LINC00958-203ENST00000527945 RNF222A6NCQ9 220 aa6.75□□□□□ -1.33
LINC00958-203ENST00000527945 SMLR1H3BR10 107 aa6.75□□□□□ -1.33
LINC00958-203ENST00000527945 RLN2P04090 185 aa6.75□□□□□ -1.33
LINC00958-203ENST00000527945 GIG44P09565 113 aaPredicted RBP6.75□□□□□ -1.33
LINC00958-203ENST00000527945 GIPP09681 153 aaPredicted RBP6.75□□□□□ -1.33
LINC00958-203ENST00000527945 RPL7P18124 248 aaKnown RBP6.75□□□□□ -1.33
LINC00958-203ENST00000527945 FGF7P21781 194 aa6.75□□□□□ -1.33
LINC00958-203ENST00000527945 ATP6V1FQ16864 119 aa6.75□□□□□ -1.33
LINC00958-203ENST00000527945 DEFB135Q30KP9 77 aa6.75□□□□□ -1.33
LINC00958-203ENST00000527945 GDF5OSQ5U4N7 250 aa6.75□□□□□ -1.33
LINC00958-203ENST00000527945 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.75□□□□□ -1.33
LINC00958-203ENST00000527945 STX12Q86Y82 276 aa6.75□□□□□ -1.33
LINC00958-203ENST00000527945 NPCDR1Q9BY65 106 aa6.75□□□□□ -1.33
LINC00958-203ENST00000527945 SMIM3Q9BZL3 60 aa6.75□□□□□ -1.33
LINC00958-203ENST00000527945 ARL6Q9H0F7 186 aa6.75□□□□□ -1.33
LINC00958-203ENST00000527945 HIGD1AQ9Y241 93 aa6.75□□□□□ -1.33
LINC00958-203ENST00000527945 TRAV5A0A0B4J249 113 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 KNCNA6PVL3 124 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 MPDU1O75352 247 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 CA1P00915 261 aaPredicted RBP6.74□□□□□ -1.33
LINC00958-203ENST00000527945 PRB4P10163 310 aaPredicted RBP6.74□□□□□ -1.33
LINC00958-203ENST00000527945 HLA-DRB4P13762 266 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 HLA-DMBP28068 263 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 RPL12P30050 165 aaKnown RBP6.74□□□□□ -1.33
LINC00958-203ENST00000527945 CAMLGP49069 296 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 BAXQ07812 192 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 PSMG4Q5JS54 123 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 IGFL4Q6B9Z1 124 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 FOXI2Q6ZQN5 318 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 RARRES2Q99969 163 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 RSG1Q9BU20 258 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 WDR61Q9GZS3 305 aaKnown RBP6.74□□□□□ -1.33
LINC00958-203ENST00000527945 SLC25A31Q9H0C2 315 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 ARV1Q9H2C2 271 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 C11orf68Q9H3H3 251 aaKnown RBP6.74□□□□□ -1.33
LINC00958-203ENST00000527945 SLC25A22Q9H936 323 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 HLA-DRB4X5D2U9 266 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 RYR2Q92736 4967 aa6.74□□□□□ -1.33
LINC00958-203ENST00000527945 H3BMM0 161 aa6.73□□□□□ -1.33
LINC00958-203ENST00000527945 SNRPCP09234 159 aaKnown RBP6.73□□□□□ -1.33
LINC00958-203ENST00000527945 OR5G3P0C626 314 aa6.73□□□□□ -1.33
LINC00958-203ENST00000527945 PET100P0DJ07 73 aa6.73□□□□□ -1.33
LINC00958-203ENST00000527945 CXCL2P19875 107 aa6.73□□□□□ -1.33
LINC00958-203ENST00000527945 C4BPBP20851 252 aa6.73□□□□□ -1.33
LINC00958-203ENST00000527945 RPL29P47914 159 aaKnown RBP6.73□□□□□ -1.33
LINC00958-203ENST00000527945 ACTL10Q5JWF8 245 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms