RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 C7orf66A4D0T2 115 aa7.48□□□□□ -1.21
PRPF40B-204ENST00000527253 A8MTW9 85 aa7.48□□□□□ -1.21
PRPF40B-204ENST00000527253 C11orf94C9JXX5 98 aa7.48□□□□□ -1.21
PRPF40B-204ENST00000527253 IL5P05113 134 aa7.48□□□□□ -1.21
PRPF40B-204ENST00000527253 GALR1P47211 349 aa7.48□□□□□ -1.21
PRPF40B-204ENST00000527253 PLP1P60201 277 aa7.48□□□□□ -1.21
PRPF40B-204ENST00000527253 PSG9Q00887 426 aa7.48□□□□□ -1.21
PRPF40B-204ENST00000527253 CNPY1Q3B7I2 92 aa7.48□□□□□ -1.21
PRPF40B-204ENST00000527253 AMTNQ6UX39 209 aa7.48□□□□□ -1.21
PRPF40B-204ENST00000527253 C1orf158Q8N1D5 194 aa7.48□□□□□ -1.21
PRPF40B-204ENST00000527253 NEU1Q99519 415 aa7.48□□□□□ -1.21
PRPF40B-204ENST00000527253 SEC22CQ9BRL7 303 aa7.48□□□□□ -1.21
PRPF40B-204ENST00000527253 SHANK2-AS3Q9BTD1 123 aa7.48□□□□□ -1.21
PRPF40B-204ENST00000527253 SLC25A39Q9BZJ4 359 aaPredicted RBP7.48□□□□□ -1.21
PRPF40B-204ENST00000527253 NDUFA13Q9P0J0 144 aa7.48□□□□□ -1.21
PRPF40B-204ENST00000527253 TRAV10A0A0B4J240 114 aa7.47□□□□□ -1.21
PRPF40B-204ENST00000527253 TSC22D2O75157 780 aa7.47□□□□□ -1.21
PRPF40B-204ENST00000527253 HYPMO75409 117 aa7.47□□□□□ -1.21
PRPF40B-204ENST00000527253 LINC00869P0C866 280 aa7.47□□□□□ -1.21
PRPF40B-204ENST00000527253 TAS2R30P59541 319 aa7.47□□□□□ -1.21
PRPF40B-204ENST00000527253 SLC38A11Q08AI6 406 aa7.47□□□□□ -1.21
PRPF40B-204ENST00000527253 RNF182Q8N6D2 247 aa7.47□□□□□ -1.21
PRPF40B-204ENST00000527253 UHRF2Q96PU4 802 aa7.47□□□□□ -1.21
PRPF40B-204ENST00000527253 C11orf1Q9H5F2 150 aa7.47□□□□□ -1.21
PRPF40B-204ENST00000527253 NPVFQ9HCQ7 196 aa7.47□□□□□ -1.21
PRPF40B-204ENST00000527253 PLA2G2EQ9NZK7 142 aa7.47□□□□□ -1.21
PRPF40B-204ENST00000527253 HIGD1AQ9Y241 93 aa7.47□□□□□ -1.21
PRPF40B-204ENST00000527253 DNAH10Q8IVF4 4471 aa7.46□□□□□ -1.21
PRPF40B-204ENST00000527253 IGHV4-4A0A075B6R2 117 aa7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 IGHV3OR16-12A0A075B7B8 117 aa7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 FNDC10F2Z333 226 aa7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 K7EPK0 472 aa7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 MRPS12O15235 138 aaKnown RBP7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 PRM2P04554 102 aa7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 PRB4P10163 310 aaPredicted RBP7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 MEOX2P50222 304 aa7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 EMP1P54849 157 aa7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 TCTAP57738 103 aa7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 IL15RAQ13261 267 aa7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 SPATA31B1PQ5VZV4 182 aa7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 EBLN2Q6P2I7 272 aa7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 OR10P1Q8NGE3 313 aa7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 ZNF431Q8TF32 576 aaPredicted RBP7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 GPR82Q96P67 336 aa7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 RPRMQ9NS64 109 aa7.46□□□□□ -1.22
PRPF40B-204ENST00000527253 DEFB131BA0A096LNP1 70 aa7.45□□□□□ -1.22
PRPF40B-204ENST00000527253 SMIM9A6NGZ8 99 aa7.45□□□□□ -1.22
PRPF40B-204ENST00000527253 CRXO43186 299 aaPredicted RBP7.45□□□□□ -1.22
PRPF40B-204ENST00000527253 OR5G3P0C626 314 aa7.45□□□□□ -1.22
PRPF40B-204ENST00000527253 CNN1P51911 297 aaKnown RBP7.45□□□□□ -1.22
PRPF40B-204ENST00000527253 RAP2BP61225 183 aa7.45□□□□□ -1.22
PRPF40B-204ENST00000527253 SELENOTP62341 195 aa7.45□□□□□ -1.22
PRPF40B-204ENST00000527253 FGL1Q08830 312 aa7.45□□□□□ -1.22
PRPF40B-204ENST00000527253 SAMD13Q5VXD3 122 aa7.45□□□□□ -1.22
PRPF40B-204ENST00000527253 OR11H7Q8NGC8 314 aa7.45□□□□□ -1.22
PRPF40B-204ENST00000527253 MGST2Q99735 147 aa7.45□□□□□ -1.22
PRPF40B-204ENST00000527253 ARL6Q9H0F7 186 aa7.45□□□□□ -1.22
PRPF40B-204ENST00000527253 NUDT15Q9NV35 164 aa7.45□□□□□ -1.22
PRPF40B-204ENST00000527253 LSM5Q9Y4Y9 91 aaKnown RBP7.45□□□□□ -1.22
PRPF40B-204ENST00000527253 RFNGQ9Y644 331 aa7.45□□□□□ -1.22
PRPF40B-204ENST00000527253 FRAS1Q86XX4 4008 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 A0A087X0K7 114 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 FAM24AA6NFZ4 105 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 FAM25EA8MYX2 175 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 AGPAT2O15120 278 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 SNRPCP09234 159 aaKnown RBP7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 H2AFB2P0C5Z0 115 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 CXCL3P19876 107 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 MORN5Q5VZ52 161 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 TEPPQ6URK8 271 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 C12orf45Q8N5I9 185 aaPredicted RBP7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 TMEM37Q8WXS4 190 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 C2orf50Q96LR7 162 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 CCDC32Q9BV29 185 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 RNF126Q9BV68 326 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 GGACTQ9BVM4 153 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 ARV1Q9H2C2 271 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 MGAT4CQ9UBM8 478 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 DKK2Q9UBU2 259 aa7.44□□□□□ -1.22
PRPF40B-204ENST00000527253 TMEM189A5PLL7 270 aa7.43□□□□□ -1.22
PRPF40B-204ENST00000527253 C5orf51A6NDU8 294 aa7.43□□□□□ -1.22
PRPF40B-204ENST00000527253 M0R2Z0 102 aa7.43□□□□□ -1.22
PRPF40B-204ENST00000527253 CST7O76096 145 aa7.43□□□□□ -1.22
PRPF40B-204ENST00000527253 SPART-AS1P0CW21 52 aa7.43□□□□□ -1.22
PRPF40B-204ENST00000527253 RPL7P18124 248 aaKnown RBP7.43□□□□□ -1.22
PRPF40B-204ENST00000527253 S100A7P31151 101 aa7.43□□□□□ -1.22
PRPF40B-204ENST00000527253 ZNF846Q147U1 533 aa7.43□□□□□ -1.22
PRPF40B-204ENST00000527253 SPINK13Q1W4C9 94 aa7.43□□□□□ -1.22
PRPF40B-204ENST00000527253 FAM222AQ5U5X8 452 aa7.43□□□□□ -1.22
PRPF40B-204ENST00000527253 IGF2BP2-AS1Q96M15 143 aa7.43□□□□□ -1.22
PRPF40B-204ENST00000527253 GOLT1BQ9Y3E0 138 aa7.43□□□□□ -1.22
PRPF40B-204ENST00000527253 LOC102723971A0A1B0GUV8 181 aa7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 IGSF23A1L1A6 192 aa7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 A6NHS1 94 aa7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 ZNF705GA8MUZ8 300 aaPredicted RBP7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 H3BTX0 84 aa7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 L7N2F9 121 aa7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 GOSR2O14653 212 aa7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 DUSP14O95147 198 aaKnown RBP7.42□□□□□ -1.22
PRPF40B-204ENST00000527253 AMBPP02760 352 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms