RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 TRAV8-2A0A0B4J237 113 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 H3BQ15 152 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 CD5P06127 495 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 TFPI2P48307 235 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 RAB2AP61019 212 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 ZNF266Q14584 549 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 ZNF124Q15973 351 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 FFAR4Q5NUL3 377 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 SIGLEC15Q6ZMC9 328 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 LINC00322Q6ZN03 302 aaPredicted RBP8□□□□□ -1.13
NEDD8-205ENST00000527046 RBPMS2Q6ZRY4 209 aaKnown RBP8□□□□□ -1.13
NEDD8-205ENST00000527046 MIR17HGQ75NE6 70 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 WFDC3Q8IUB2 231 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 RPP25LQ8N5L8 163 aaKnown RBP8□□□□□ -1.13
NEDD8-205ENST00000527046 SAT2Q96F10 170 aaPredicted RBP8□□□□□ -1.13
NEDD8-205ENST00000527046 GRAMD2BQ96HH9 432 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 ARPC5LQ9BPX5 153 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 PSMG3Q9BT73 122 aaPredicted RBP8□□□□□ -1.13
NEDD8-205ENST00000527046 SLC25A2Q9BXI2 301 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 TMEM231Q9H6L2 316 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 SLC25A22Q9H936 323 aa8□□□□□ -1.13
NEDD8-205ENST00000527046 HELTA6NFD8 242 aa7.99□□□□□ -1.13
NEDD8-205ENST00000527046 C17orf112F2Z3M2 114 aa7.99□□□□□ -1.13
NEDD8-205ENST00000527046 BCL2L11O43521 198 aa7.99□□□□□ -1.13
NEDD8-205ENST00000527046 COX7A2P2O60397 106 aa7.99□□□□□ -1.13
NEDD8-205ENST00000527046 IGLC2P0DOY2 106 aa7.99□□□□□ -1.13
NEDD8-205ENST00000527046 SPP1P10451 314 aa7.99□□□□□ -1.13
NEDD8-205ENST00000527046 NKX2-5P52952 324 aaPredicted RBP7.99□□□□□ -1.13
NEDD8-205ENST00000527046 FAM78BQ5VT40 261 aa7.99□□□□□ -1.13
NEDD8-205ENST00000527046 SSX7Q7RTT5 188 aa7.99□□□□□ -1.13
NEDD8-205ENST00000527046 OR8I2Q8N0Y5 310 aa7.99□□□□□ -1.13
NEDD8-205ENST00000527046 OR1L4Q8NGR5 311 aa7.99□□□□□ -1.13
NEDD8-205ENST00000527046 C20orf173Q96LM9 149 aa7.99□□□□□ -1.13
NEDD8-205ENST00000527046 FAM110AQ9BQ89 295 aa7.99□□□□□ -1.13
NEDD8-205ENST00000527046 RPRMQ9NS64 109 aa7.99□□□□□ -1.13
NEDD8-205ENST00000527046 ZNF586Q9NXT0 402 aa7.99□□□□□ -1.13
NEDD8-205ENST00000527046 DNAH3Q8TD57 4116 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 A0A087X0K7 114 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 A8MZ25 164 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 JTBO76095 146 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 SNRPCP09234 159 aaKnown RBP7.98□□□□□ -1.13
NEDD8-205ENST00000527046 M6PRP20645 277 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 BMI1P35226 326 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 DEFB1P60022 68 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 CD81P60033 236 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 SERF2P84101 59 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 ZNF726P1Q15940 193 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 IGFL4Q6B9Z1 124 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 DEFB125Q8N687 156 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 ZNF709Q8N972 641 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 STXBP6Q8NFX7 210 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 PPP1R14BQ96C90 147 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 PFDN5Q99471 154 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 MAP6D1Q9H9H5 199 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 NRN1Q9NPD7 142 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 UBQLN2Q9UHD9 624 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 FUT9Q9Y231 359 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 AGRNO00468 2067 aa7.98□□□□□ -1.13
NEDD8-205ENST00000527046 MEGF8Q7Z7M0 2845 aa7.97□□□□□ -1.13
NEDD8-205ENST00000527046 BORCS7-ASMTA0A0B4J1R7 106 aa7.97□□□□□ -1.13
NEDD8-205ENST00000527046 RBMY1BA6NDE4 496 aaKnown RBP7.97□□□□□ -1.13
NEDD8-205ENST00000527046 RBMY1EA6NEQ0 496 aaKnown RBP7.97□□□□□ -1.13
NEDD8-205ENST00000527046 OR11H12B2RN74 326 aa7.97□□□□□ -1.13
NEDD8-205ENST00000527046 NDUFB4O95168 129 aa7.97□□□□□ -1.13
NEDD8-205ENST00000527046 RBMY1DP0C7P1 496 aaKnown RBP7.97□□□□□ -1.13
NEDD8-205ENST00000527046 PYYP10082 97 aa7.97□□□□□ -1.13
NEDD8-205ENST00000527046 RPL11P62913 178 aaKnown RBP7.97□□□□□ -1.13
NEDD8-205ENST00000527046 APRG1Q8IVJ8 170 aa7.97□□□□□ -1.13
NEDD8-205ENST00000527046 STOML3Q8TAV4 291 aa7.97□□□□□ -1.13
NEDD8-205ENST00000527046 NARS2Q96I59 477 aaKnown RBP7.97□□□□□ -1.13
NEDD8-205ENST00000527046 GPR82Q96P67 336 aa7.97□□□□□ -1.13
NEDD8-205ENST00000527046 TMEM14CQ9P0S9 112 aa7.97□□□□□ -1.13
NEDD8-205ENST00000527046 ZMAT5Q9UDW3 170 aaKnown RBP7.97□□□□□ -1.13
NEDD8-205ENST00000527046 OR4C46A6NHA9 309 aa7.96□□□□□ -1.14
NEDD8-205ENST00000527046 H3BTX0 84 aa7.96□□□□□ -1.14
NEDD8-205ENST00000527046 SLC17A3O00476 420 aa7.96□□□□□ -1.14
NEDD8-205ENST00000527046 SEC11BP0C7V7 166 aa7.96□□□□□ -1.14
NEDD8-205ENST00000527046 IGHV4-30-4P0DP06 118 aa7.96□□□□□ -1.14
NEDD8-205ENST00000527046 RPL7P18124 248 aaKnown RBP7.96□□□□□ -1.14
NEDD8-205ENST00000527046 HLA-DMBP28068 263 aa7.96□□□□□ -1.14
NEDD8-205ENST00000527046 DEFB131AP59861 70 aa7.96□□□□□ -1.14
NEDD8-205ENST00000527046 ZFP69Q49AA0 526 aa7.96□□□□□ -1.14
NEDD8-205ENST00000527046 OR10G4Q8NGN3 311 aa7.96□□□□□ -1.14
NEDD8-205ENST00000527046 OR10G9Q8NGN4 311 aa7.96□□□□□ -1.14
NEDD8-205ENST00000527046 OR10G7Q8NGN6 311 aa7.96□□□□□ -1.14
NEDD8-205ENST00000527046 FXYD5Q96DB9 178 aa7.96□□□□□ -1.14
NEDD8-205ENST00000527046 GNPNAT1Q96EK6 184 aaPredicted RBP7.96□□□□□ -1.14
NEDD8-205ENST00000527046 HRH4Q9H3N8 390 aa7.96□□□□□ -1.14
NEDD8-205ENST00000527046 KCNIP2Q9NS61 270 aa7.96□□□□□ -1.14
NEDD8-205ENST00000527046 PFDN2Q9UHV9 154 aa7.96□□□□□ -1.14
NEDD8-205ENST00000527046 KANTRA0A1W2PQU2 76 aa7.95□□□□□ -1.14
NEDD8-205ENST00000527046 DNASE2O00115 360 aaPredicted RBP7.95□□□□□ -1.14
NEDD8-205ENST00000527046 ZNF688P0C7X2 276 aa7.95□□□□□ -1.14
NEDD8-205ENST00000527046 GALR1P47211 349 aa7.95□□□□□ -1.14
NEDD8-205ENST00000527046 FHITP49789 147 aa7.95□□□□□ -1.14
NEDD8-205ENST00000527046 PAFAH1B2P68402 229 aa7.95□□□□□ -1.14
NEDD8-205ENST00000527046 ACOT6Q3I5F7 207 aaPredicted RBP7.95□□□□□ -1.14
NEDD8-205ENST00000527046 GDF5OSQ5U4N7 250 aa7.95□□□□□ -1.14
NEDD8-205ENST00000527046 BPIFA4PQ86YQ2 179 aa7.95□□□□□ -1.14
NEDD8-205ENST00000527046 BAP18Q8IXM2 172 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms