RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 ACTL10Q5JWF8 245 aa11.92□□□□□ -0.5
SSSCA1-202ENST00000526433 MIC13Q5XKP0 118 aa11.92□□□□□ -0.5
SSSCA1-202ENST00000526433 RNF183Q96D59 192 aa11.92□□□□□ -0.5
SSSCA1-202ENST00000526433 C17orf77Q96MU5 243 aa11.92□□□□□ -0.5
SSSCA1-202ENST00000526433 LINC00052Q96N35 136 aa11.92□□□□□ -0.5
SSSCA1-202ENST00000526433 TP53TG1Q9Y2A0 90 aa11.92□□□□□ -0.5
SSSCA1-202ENST00000526433 PET100P0DJ07 73 aa11.91□□□□□ -0.5
SSSCA1-202ENST00000526433 FGF7P21781 194 aa11.91□□□□□ -0.5
SSSCA1-202ENST00000526433 RPL29P47914 159 aaKnown RBP11.91□□□□□ -0.5
SSSCA1-202ENST00000526433 PRR20EP86478 221 aa11.91□□□□□ -0.5
SSSCA1-202ENST00000526433 PRR20CP86479 221 aa11.91□□□□□ -0.5
SSSCA1-202ENST00000526433 PRR20DP86480 221 aa11.91□□□□□ -0.5
SSSCA1-202ENST00000526433 PRR20BP86481 221 aa11.91□□□□□ -0.5
SSSCA1-202ENST00000526433 PRR20AP86496 221 aa11.91□□□□□ -0.5
SSSCA1-202ENST00000526433 Q6ZRG5 221 aa11.91□□□□□ -0.5
SSSCA1-202ENST00000526433 TRPT1Q86TN4 253 aaKnown RBP11.91□□□□□ -0.5
SSSCA1-202ENST00000526433 OR11H7Q8NGC8 314 aa11.91□□□□□ -0.5
SSSCA1-202ENST00000526433 CHAC2Q8WUX2 184 aa11.91□□□□□ -0.5
SSSCA1-202ENST00000526433 TMEM37Q8WXS4 190 aa11.91□□□□□ -0.5
SSSCA1-202ENST00000526433 DNAJC4Q9NNZ3 241 aa11.91□□□□□ -0.5
SSSCA1-202ENST00000526433 ELOA3CA0A087WX78 387 aaPredicted RBP11.9□□□□□ -0.5
SSSCA1-202ENST00000526433 ISLRO14498 428 aa11.9□□□□□ -0.5
SSSCA1-202ENST00000526433 COX7A2P2O60397 106 aa11.9□□□□□ -0.5
SSSCA1-202ENST00000526433 MPDU1O75352 247 aa11.9□□□□□ -0.5
SSSCA1-202ENST00000526433 RPL7P18124 248 aaKnown RBP11.9□□□□□ -0.5
SSSCA1-202ENST00000526433 PSMB3P49720 205 aa11.9□□□□□ -0.5
SSSCA1-202ENST00000526433 MEOX2P50222 304 aa11.9□□□□□ -0.5
SSSCA1-202ENST00000526433 CLINT1Q14677 625 aa11.9□□□□□ -0.5
SSSCA1-202ENST00000526433 OPCMLQ14982 345 aa11.9□□□□□ -0.5
SSSCA1-202ENST00000526433 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.9□□□□□ -0.5
SSSCA1-202ENST00000526433 LINC00305Q7Z4B0 112 aa11.9□□□□□ -0.5
SSSCA1-202ENST00000526433 C16orf92Q96LL3 132 aa11.9□□□□□ -0.5
SSSCA1-202ENST00000526433 MBD2Q9UBB5 411 aa11.9□□□□□ -0.5
SSSCA1-202ENST00000526433 RNF24Q9Y225 148 aa11.9□□□□□ -0.5
SSSCA1-202ENST00000526433 ATF4P18848 351 aaPredicted RBP11.89□□□□□ -0.51
SSSCA1-202ENST00000526433 RPL12P30050 165 aaKnown RBP11.89□□□□□ -0.51
SSSCA1-202ENST00000526433 FGL1Q08830 312 aa11.89□□□□□ -0.51
SSSCA1-202ENST00000526433 OXA1LQ15070 435 aa11.89□□□□□ -0.51
SSSCA1-202ENST00000526433 SAMD13Q5VXD3 122 aa11.89□□□□□ -0.51
SSSCA1-202ENST00000526433 C10orf113Q5VZT2 155 aa11.89□□□□□ -0.51
SSSCA1-202ENST00000526433 MUC7Q8TAX7 377 aa11.89□□□□□ -0.51
SSSCA1-202ENST00000526433 SLC39A9Q9NUM3 307 aa11.89□□□□□ -0.51
SSSCA1-202ENST00000526433 HSPB11Q9Y547 144 aa11.89□□□□□ -0.51
SSSCA1-202ENST00000526433 H3BMM0 161 aa11.88□□□□□ -0.51
SSSCA1-202ENST00000526433 CA1P00915 261 aaPredicted RBP11.88□□□□□ -0.51
SSSCA1-202ENST00000526433 LYL1P12980 280 aa11.88□□□□□ -0.51
SSSCA1-202ENST00000526433 DEFB1P60022 68 aa11.88□□□□□ -0.51
SSSCA1-202ENST00000526433 B2MP61769 119 aa11.88□□□□□ -0.51
SSSCA1-202ENST00000526433 MORN3Q6PF18 240 aaPredicted RBP11.88□□□□□ -0.51
SSSCA1-202ENST00000526433 OR1L4Q8NGR5 311 aa11.88□□□□□ -0.51
SSSCA1-202ENST00000526433 THAP6Q8TBB0 222 aa11.88□□□□□ -0.51
SSSCA1-202ENST00000526433 C20orf173Q96LM9 149 aa11.88□□□□□ -0.51
SSSCA1-202ENST00000526433 PXMP4Q9Y6I8 212 aa11.88□□□□□ -0.51
SSSCA1-202ENST00000526433 C3orf84H3BNL1 204 aa11.87□□□□□ -0.51
SSSCA1-202ENST00000526433 MRPS12O15235 138 aaKnown RBP11.87□□□□□ -0.51
SSSCA1-202ENST00000526433 GIG44P09565 113 aaPredicted RBP11.87□□□□□ -0.51
SSSCA1-202ENST00000526433 SPP1P10451 314 aa11.87□□□□□ -0.51
SSSCA1-202ENST00000526433 GDF5OSQ5U4N7 250 aa11.87□□□□□ -0.51
SSSCA1-202ENST00000526433 MORN5Q5VZ52 161 aa11.87□□□□□ -0.51
SSSCA1-202ENST00000526433 IGFL4Q6B9Z1 124 aa11.87□□□□□ -0.51
SSSCA1-202ENST00000526433 PFDN5Q99471 154 aa11.87□□□□□ -0.51
SSSCA1-202ENST00000526433 NPCDR1Q9BY65 106 aa11.87□□□□□ -0.51
SSSCA1-202ENST00000526433 TRAV8-2A0A0B4J237 113 aa11.86□□□□□ -0.51
SSSCA1-202ENST00000526433 HLA-DRB4P13762 266 aa11.86□□□□□ -0.51
SSSCA1-202ENST00000526433 GATAD1Q8WUU5 269 aa11.86□□□□□ -0.51
SSSCA1-202ENST00000526433 SMIM3Q9BZL3 60 aa11.86□□□□□ -0.51
SSSCA1-202ENST00000526433 WDR61Q9GZS3 305 aaKnown RBP11.86□□□□□ -0.51
SSSCA1-202ENST00000526433 SAV1Q9H4B6 383 aaPredicted RBP11.86□□□□□ -0.51
SSSCA1-202ENST00000526433 RPRMQ9NS64 109 aa11.86□□□□□ -0.51
SSSCA1-202ENST00000526433 HLA-DRB4X5D2U9 266 aa11.86□□□□□ -0.51
SSSCA1-202ENST00000526433 A0A087X0K7 114 aa11.85□□□□□ -0.51
SSSCA1-202ENST00000526433 TRAV5A0A0B4J249 113 aa11.85□□□□□ -0.51
SSSCA1-202ENST00000526433 FOXI2Q6ZQN5 318 aa11.85□□□□□ -0.51
SSSCA1-202ENST00000526433 BPIFA4PQ86YQ2 179 aa11.85□□□□□ -0.51
SSSCA1-202ENST00000526433 ZNF709Q8N972 641 aa11.85□□□□□ -0.51
SSSCA1-202ENST00000526433 LRRC20Q8TCA0 184 aa11.85□□□□□ -0.51
SSSCA1-202ENST00000526433 ATP5SQ99766 215 aa11.85□□□□□ -0.51
SSSCA1-202ENST00000526433 RARRES2Q99969 163 aa11.85□□□□□ -0.51
SSSCA1-202ENST00000526433 F6UB75 175 aa11.84□□□□□ -0.51
SSSCA1-202ENST00000526433 IGKV3-20P01619 116 aa11.84□□□□□ -0.51
SSSCA1-202ENST00000526433 SNRPCP09234 159 aaKnown RBP11.84□□□□□ -0.51
SSSCA1-202ENST00000526433 GIPP09681 153 aaPredicted RBP11.84□□□□□ -0.51
SSSCA1-202ENST00000526433 C4BPBP20851 252 aa11.84□□□□□ -0.51
SSSCA1-202ENST00000526433 TMEM41BQ5BJD5 291 aa11.84□□□□□ -0.51
SSSCA1-202ENST00000526433 Q5BKY6 102 aa11.84□□□□□ -0.51
SSSCA1-202ENST00000526433 SPATA31B1PQ5VZV4 182 aa11.84□□□□□ -0.51
SSSCA1-202ENST00000526433 EBLN2Q6P2I7 272 aa11.84□□□□□ -0.51
SSSCA1-202ENST00000526433 OR11H2Q8NH07 326 aa11.84□□□□□ -0.51
SSSCA1-202ENST00000526433 WFDC1Q9HC57 220 aa11.84□□□□□ -0.51
SSSCA1-202ENST00000526433 A0A0J9YWU9 116 aa11.83□□□□□ -0.52
SSSCA1-202ENST00000526433 A0A0J9YX75 114 aa11.83□□□□□ -0.52
SSSCA1-202ENST00000526433 IFNA5P01569 189 aa11.83□□□□□ -0.52
SSSCA1-202ENST00000526433 NUTF2P61970 127 aaKnown RBP11.83□□□□□ -0.52
SSSCA1-202ENST00000526433 GCSAMLQ5JQS6 135 aa11.83□□□□□ -0.52
SSSCA1-202ENST00000526433 RNF182Q8N6D2 247 aa11.83□□□□□ -0.52
SSSCA1-202ENST00000526433 OR4B1Q8NGF8 309 aa11.83□□□□□ -0.52
SSSCA1-202ENST00000526433 SCGB1C1Q8TD33 95 aa11.83□□□□□ -0.52
SSSCA1-202ENST00000526433 ASB13Q8WXK3 278 aa11.83□□□□□ -0.52
SSSCA1-202ENST00000526433 C17orf112F2Z3M2 114 aa11.82□□□□□ -0.52
SSSCA1-202ENST00000526433 HLA-DMBP28068 263 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms