RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 OR1B1Q8NGR6 318 aa9.68□□□□□ -0.86
SMPD1-202ENST00000526280 GLMPQ8WWB7 406 aa9.68□□□□□ -0.86
SMPD1-202ENST00000526280 MPDU1O75352 247 aa9.67□□□□□ -0.86
SMPD1-202ENST00000526280 HYPMO75409 117 aa9.67□□□□□ -0.86
SMPD1-202ENST00000526280 SPP1P10451 314 aa9.67□□□□□ -0.86
SMPD1-202ENST00000526280 FGF7P21781 194 aa9.67□□□□□ -0.86
SMPD1-202ENST00000526280 CD81P60033 236 aa9.67□□□□□ -0.86
SMPD1-202ENST00000526280 PAFAH1B2P68402 229 aa9.67□□□□□ -0.86
SMPD1-202ENST00000526280 C1orf194Q5T5A4 169 aa9.67□□□□□ -0.86
SMPD1-202ENST00000526280 GBGT1Q8N5D6 347 aa9.67□□□□□ -0.86
SMPD1-202ENST00000526280 GGTLC1Q9BX51 225 aa9.67□□□□□ -0.86
SMPD1-202ENST00000526280 HRH4Q9H3N8 390 aa9.67□□□□□ -0.86
SMPD1-202ENST00000526280 SMAD5-AS1Q9Y6J3 95 aa9.67□□□□□ -0.86
SMPD1-202ENST00000526280 IGKV3-7A0A075B6H7 116 aa9.66□□□□□ -0.86
SMPD1-202ENST00000526280 HELTA6NFD8 242 aa9.66□□□□□ -0.86
SMPD1-202ENST00000526280 OR4C46A6NHA9 309 aa9.66□□□□□ -0.86
SMPD1-202ENST00000526280 M6PRP20645 277 aa9.66□□□□□ -0.86
SMPD1-202ENST00000526280 RPL29P47914 159 aaKnown RBP9.66□□□□□ -0.86
SMPD1-202ENST00000526280 RPL11P62913 178 aaKnown RBP9.66□□□□□ -0.86
SMPD1-202ENST00000526280 PRR20EP86478 221 aa9.66□□□□□ -0.86
SMPD1-202ENST00000526280 PRR20CP86479 221 aa9.66□□□□□ -0.86
SMPD1-202ENST00000526280 PRR20DP86480 221 aa9.66□□□□□ -0.86
SMPD1-202ENST00000526280 PRR20BP86481 221 aa9.66□□□□□ -0.86
SMPD1-202ENST00000526280 PRR20AP86496 221 aa9.66□□□□□ -0.86
SMPD1-202ENST00000526280 ATP5SQ99766 215 aa9.66□□□□□ -0.86
SMPD1-202ENST00000526280 MS4A6AQ9H2W1 248 aa9.66□□□□□ -0.86
SMPD1-202ENST00000526280 C19orf73Q9NVV2 129 aa9.66□□□□□ -0.86
SMPD1-202ENST00000526280 DOK5Q9P104 306 aa9.66□□□□□ -0.86
SMPD1-202ENST00000526280 TGP01266 2768 aa9.66□□□□□ -0.86
SMPD1-202ENST00000526280 TRAV2A0A0B4J234 112 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 TMEM218A2RU14 115 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 ZNF98A6NK75 572 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 OR5G3P0C626 314 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 S100A7P31151 101 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 TFPI2P48307 235 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 RAB5CP51148 216 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 ZNF266Q14584 549 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 MIC13Q5XKP0 118 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 PATE2Q6UY27 113 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 SIGLEC15Q6ZMC9 328 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 Q6ZRG5 221 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 HSD17B11Q8NBQ5 300 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 SUN5Q8TC36 379 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 NPCDR1Q9BY65 106 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 SLC25A39Q9BZJ4 359 aaPredicted RBP9.65□□□□□ -0.86
SMPD1-202ENST00000526280 WDR61Q9GZS3 305 aaKnown RBP9.65□□□□□ -0.86
SMPD1-202ENST00000526280 HIGD1AQ9Y241 93 aa9.65□□□□□ -0.86
SMPD1-202ENST00000526280 A8MZ25 164 aa9.64□□□□□ -0.87
SMPD1-202ENST00000526280 OR11H12B2RN74 326 aa9.64□□□□□ -0.87
SMPD1-202ENST00000526280 H3BRN7 92 aa9.64□□□□□ -0.87
SMPD1-202ENST00000526280 DNASE2O00115 360 aaPredicted RBP9.64□□□□□ -0.87
SMPD1-202ENST00000526280 APOC3P02656 99 aa9.64□□□□□ -0.87
SMPD1-202ENST00000526280 IGHV4-30-4P0DP06 118 aa9.64□□□□□ -0.87
SMPD1-202ENST00000526280 WFDC3Q8IUB2 231 aa9.64□□□□□ -0.87
SMPD1-202ENST00000526280 OR8I2Q8N0Y5 310 aa9.64□□□□□ -0.87
SMPD1-202ENST00000526280 STXBP6Q8NFX7 210 aa9.64□□□□□ -0.87
SMPD1-202ENST00000526280 FAM110AQ9BQ89 295 aa9.64□□□□□ -0.87
SMPD1-202ENST00000526280 SHANK2-AS3Q9BTD1 123 aa9.64□□□□□ -0.87
SMPD1-202ENST00000526280 SH3BGRL3Q9H299 93 aa9.64□□□□□ -0.87
SMPD1-202ENST00000526280 DNAJC4Q9NNZ3 241 aa9.64□□□□□ -0.87
SMPD1-202ENST00000526280 TREM1Q9NP99 234 aa9.64□□□□□ -0.87
SMPD1-202ENST00000526280 SLC39A9Q9NUM3 307 aa9.64□□□□□ -0.87
SMPD1-202ENST00000526280 ELOA3CA0A087WX78 387 aaPredicted RBP9.63□□□□□ -0.87
SMPD1-202ENST00000526280 K7EQG2 157 aa9.63□□□□□ -0.87
SMPD1-202ENST00000526280 IFNA5P01569 189 aa9.63□□□□□ -0.87
SMPD1-202ENST00000526280 B2MP61769 119 aa9.63□□□□□ -0.87
SMPD1-202ENST00000526280 SRSF3P84103 164 aaKnown RBP9.63□□□□□ -0.87
SMPD1-202ENST00000526280 ODF3L2Q3SX64 289 aa9.63□□□□□ -0.87
SMPD1-202ENST00000526280 S100A7AQ86SG5 101 aa9.63□□□□□ -0.87
SMPD1-202ENST00000526280 DEFB125Q8N687 156 aa9.63□□□□□ -0.87
SMPD1-202ENST00000526280 LYPD6BQ8NI32 183 aa9.63□□□□□ -0.87
SMPD1-202ENST00000526280 DCANP1Q8TF63 244 aa9.63□□□□□ -0.87
SMPD1-202ENST00000526280 TMEM37Q8WXS4 190 aa9.63□□□□□ -0.87
SMPD1-202ENST00000526280 GNPNAT1Q96EK6 184 aaPredicted RBP9.63□□□□□ -0.87
SMPD1-202ENST00000526280 UHRF2Q96PU4 802 aa9.63□□□□□ -0.87
SMPD1-202ENST00000526280 SCRT1Q9BWW7 348 aa9.63□□□□□ -0.87
SMPD1-202ENST00000526280 PARD6GQ9BYG4 376 aaPredicted RBP9.63□□□□□ -0.87
SMPD1-202ENST00000526280 WFDC10AQ9H1F0 79 aa9.63□□□□□ -0.87
SMPD1-202ENST00000526280 TMA7Q9Y2S6 64 aaKnown RBP9.63□□□□□ -0.87
SMPD1-202ENST00000526280 PXMP4Q9Y6I8 212 aa9.63□□□□□ -0.87
SMPD1-202ENST00000526280 COX7A2P2O60397 106 aa9.62□□□□□ -0.87
SMPD1-202ENST00000526280 ATP6V0CP27449 155 aa9.62□□□□□ -0.87
SMPD1-202ENST00000526280 CMC4P56277 68 aaPredicted RBP9.62□□□□□ -0.87
SMPD1-202ENST00000526280 C10orf91Q5T1B1 145 aa9.62□□□□□ -0.87
SMPD1-202ENST00000526280 C10orf113Q5VZT2 155 aa9.62□□□□□ -0.87
SMPD1-202ENST00000526280 LEMD1Q68G75 181 aa9.62□□□□□ -0.87
SMPD1-202ENST00000526280 ZNF709Q8N972 641 aa9.62□□□□□ -0.87
SMPD1-202ENST00000526280 OR1L4Q8NGR5 311 aa9.62□□□□□ -0.87
SMPD1-202ENST00000526280 OR2G3Q8NGZ4 309 aa9.62□□□□□ -0.87
SMPD1-202ENST00000526280 SCGB1C1Q8TD33 95 aa9.62□□□□□ -0.87
SMPD1-202ENST00000526280 GPR82Q96P67 336 aa9.62□□□□□ -0.87
SMPD1-202ENST00000526280 TUBA4BQ9H853 241 aa9.62□□□□□ -0.87
SMPD1-202ENST00000526280 SLC25A22Q9H936 323 aa9.62□□□□□ -0.87
SMPD1-202ENST00000526280 NRN1Q9NPD7 142 aa9.62□□□□□ -0.87
SMPD1-202ENST00000526280 C17orf112F2Z3M2 114 aa9.61□□□□□ -0.87
SMPD1-202ENST00000526280 FRMD6-AS1P0C7T7 363 aa9.61□□□□□ -0.87
SMPD1-202ENST00000526280 GALR1P47211 349 aa9.61□□□□□ -0.87
SMPD1-202ENST00000526280 BTN1A1Q13410 526 aa9.61□□□□□ -0.87
SMPD1-202ENST00000526280 LINC00305Q7Z4B0 112 aa9.61□□□□□ -0.87
SMPD1-202ENST00000526280 FAM24BQ8N5W8 94 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms