RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 HLA-DRB4X5D2U9 266 aa10.12□□□□□ -0.79
CPSF1-201ENST00000526271 SSSCA1O60232 199 aa10.11□□□□□ -0.79
CPSF1-201ENST00000526271 GIPP09681 153 aaPredicted RBP10.11□□□□□ -0.79
CPSF1-201ENST00000526271 IAPPP10997 89 aa10.11□□□□□ -0.79
CPSF1-201ENST00000526271 YPEL3P61236 119 aaPredicted RBP10.11□□□□□ -0.79
CPSF1-201ENST00000526271 SLC24A4Q8NFF2 622 aa10.11□□□□□ -0.79
CPSF1-201ENST00000526271 PPP1R1CQ8WVI7 109 aa10.11□□□□□ -0.79
CPSF1-201ENST00000526271 NARS2Q96I59 477 aaKnown RBP10.11□□□□□ -0.79
CPSF1-201ENST00000526271 NRN1Q9NPD7 142 aa10.11□□□□□ -0.79
CPSF1-201ENST00000526271 LSM5Q9Y4Y9 91 aaKnown RBP10.11□□□□□ -0.79
CPSF1-201ENST00000526271 A0A1B0GVG6 124 aa10.1□□□□□ -0.79
CPSF1-201ENST00000526271 RPS10-NUDT3A0A1W2PQS6 291 aa10.1□□□□□ -0.79
CPSF1-201ENST00000526271 H0YIZ8 118 aa10.1□□□□□ -0.79
CPSF1-201ENST00000526271 TSC22D2O75157 780 aa10.1□□□□□ -0.79
CPSF1-201ENST00000526271 MPC2O95563 127 aa10.1□□□□□ -0.79
CPSF1-201ENST00000526271 OR10J1P30954 320 aa10.1□□□□□ -0.79
CPSF1-201ENST00000526271 EMP1P54849 157 aa10.1□□□□□ -0.79
CPSF1-201ENST00000526271 RPP30P78346 268 aaKnown RBP10.1□□□□□ -0.79
CPSF1-201ENST00000526271 NOXA1Q86UR1 476 aa10.1□□□□□ -0.79
CPSF1-201ENST00000526271 C1orf158Q8N1D5 194 aa10.1□□□□□ -0.79
CPSF1-201ENST00000526271 OR1S2Q8NGQ3 325 aa10.1□□□□□ -0.79
CPSF1-201ENST00000526271 PSENENQ9NZ42 101 aa10.1□□□□□ -0.79
CPSF1-201ENST00000526271 FAT1Q14517 4588 aa10.09□□□□□ -0.79
CPSF1-201ENST00000526271 IGKV1D-37A0A075B6S9 117 aa10.09□□□□□ -0.79
CPSF1-201ENST00000526271 TRAV30A0A087WSZ9 112 aa10.09□□□□□ -0.79
CPSF1-201ENST00000526271 IFNA10P01566 189 aa10.09□□□□□ -0.79
CPSF1-201ENST00000526271 IGKV3-20P01619 116 aa10.09□□□□□ -0.79
CPSF1-201ENST00000526271 RLN2P04090 185 aa10.09□□□□□ -0.79
CPSF1-201ENST00000526271 PRM2P04554 102 aa10.09□□□□□ -0.79
CPSF1-201ENST00000526271 IL4P05112 153 aa10.09□□□□□ -0.79
CPSF1-201ENST00000526271 NPY1RP25929 384 aa10.09□□□□□ -0.79
CPSF1-201ENST00000526271 S100A10P60903 97 aa10.09□□□□□ -0.79
CPSF1-201ENST00000526271 RAP2BP61225 183 aa10.09□□□□□ -0.79
CPSF1-201ENST00000526271 FAM222AQ5U5X8 452 aa10.09□□□□□ -0.79
CPSF1-201ENST00000526271 TMEM14EPQ6UXP3 125 aa10.09□□□□□ -0.79
CPSF1-201ENST00000526271 RNASEH2CQ8TDP1 164 aaKnown RBP10.09□□□□□ -0.79
CPSF1-201ENST00000526271 NPIPB3Q92617 1050 aa10.09□□□□□ -0.79
CPSF1-201ENST00000526271 SLC35B3Q9H1N7 401 aa10.09□□□□□ -0.79
CPSF1-201ENST00000526271 PMS2P5A8MQ11 134 aa10.08□□□□□ -0.8
CPSF1-201ENST00000526271 F6UB75 175 aa10.08□□□□□ -0.8
CPSF1-201ENST00000526271 TOMM40O96008 361 aa10.08□□□□□ -0.8
CPSF1-201ENST00000526271 PSG1P11464 419 aa10.08□□□□□ -0.8
CPSF1-201ENST00000526271 PVALBP20472 110 aaPredicted RBP10.08□□□□□ -0.8
CPSF1-201ENST00000526271 EIF2B2P49770 351 aaKnown RBP10.08□□□□□ -0.8
CPSF1-201ENST00000526271 TNP2Q05952 138 aa10.08□□□□□ -0.8
CPSF1-201ENST00000526271 SPANXN5Q5MJ07 72 aa10.08□□□□□ -0.8
CPSF1-201ENST00000526271 SIGLEC15Q6ZMC9 328 aa10.08□□□□□ -0.8
CPSF1-201ENST00000526271 OR51G1Q8NGK1 321 aa10.08□□□□□ -0.8
CPSF1-201ENST00000526271 SEPSECSQ9HD40 501 aaKnown RBP10.08□□□□□ -0.8
CPSF1-201ENST00000526271 OR5AC2Q9NZP5 309 aa10.08□□□□□ -0.8
CPSF1-201ENST00000526271 STRAPQ9Y3F4 350 aaKnown RBP10.08□□□□□ -0.8
CPSF1-201ENST00000526271 PRSS46E5RG02 174 aa10.07□□□□□ -0.8
CPSF1-201ENST00000526271 E5RGE8 158 aa10.07□□□□□ -0.8
CPSF1-201ENST00000526271 L7N2F9 121 aa10.07□□□□□ -0.8
CPSF1-201ENST00000526271 SPART-AS1P0CW21 52 aa10.07□□□□□ -0.8
CPSF1-201ENST00000526271 BCAP31P51572 246 aa10.07□□□□□ -0.8
CPSF1-201ENST00000526271 RAB11AP62491 216 aa10.07□□□□□ -0.8
CPSF1-201ENST00000526271 VAMP2P63027 116 aa10.07□□□□□ -0.8
CPSF1-201ENST00000526271 FGL1Q08830 312 aa10.07□□□□□ -0.8
CPSF1-201ENST00000526271 LRRC37A5PQ49AS3 106 aa10.07□□□□□ -0.8
CPSF1-201ENST00000526271 Q5BKY6 102 aa10.07□□□□□ -0.8
CPSF1-201ENST00000526271 Q8WTZ3 238 aa10.07□□□□□ -0.8
CPSF1-201ENST00000526271 C20orf173Q96LM9 149 aa10.07□□□□□ -0.8
CPSF1-201ENST00000526271 SAV1Q9H4B6 383 aaPredicted RBP10.07□□□□□ -0.8
CPSF1-201ENST00000526271 LYRM2Q9NU23 88 aaPredicted RBP10.07□□□□□ -0.8
CPSF1-201ENST00000526271 hCG_2014768A0A024R1R8 64 aa10.06□□□□□ -0.8
CPSF1-201ENST00000526271 IGHV3OR16-12A0A075B7B8 117 aa10.06□□□□□ -0.8
CPSF1-201ENST00000526271 FAM24AA6NFZ4 105 aa10.06□□□□□ -0.8
CPSF1-201ENST00000526271 G3V3Q6 166 aa10.06□□□□□ -0.8
CPSF1-201ENST00000526271 H3BP45 60 aa10.06□□□□□ -0.8
CPSF1-201ENST00000526271 PET100P0DJ07 73 aa10.06□□□□□ -0.8
CPSF1-201ENST00000526271 SLC25A4P12235 298 aa10.06□□□□□ -0.8
CPSF1-201ENST00000526271 GPX4P36969 197 aaPredicted RBP10.06□□□□□ -0.8
CPSF1-201ENST00000526271 ETFRF1Q6IPR1 90 aa10.06□□□□□ -0.8
CPSF1-201ENST00000526271 TMEM88Q6PEY1 159 aa10.06□□□□□ -0.8
CPSF1-201ENST00000526271 ST6GAL2Q96JF0 529 aa10.06□□□□□ -0.8
CPSF1-201ENST00000526271 C1QTNF4Q9BXJ3 329 aa10.06□□□□□ -0.8
CPSF1-201ENST00000526271 AP2S1P53680 142 aaPredicted RBP10.05□□□□□ -0.8
CPSF1-201ENST00000526271 SNRPD3P62318 126 aaKnown RBP10.05□□□□□ -0.8
CPSF1-201ENST00000526271 ZNF90Q03938 601 aa10.05□□□□□ -0.8
CPSF1-201ENST00000526271 AMTNQ6UX39 209 aa10.05□□□□□ -0.8
CPSF1-201ENST00000526271 TMEM252Q8N6L7 170 aa10.05□□□□□ -0.8
CPSF1-201ENST00000526271 OR2T35Q8NGX2 323 aa10.05□□□□□ -0.8
CPSF1-201ENST00000526271 THAP6Q8TBB0 222 aa10.05□□□□□ -0.8
CPSF1-201ENST00000526271 ACY3Q96HD9 319 aa10.05□□□□□ -0.8
CPSF1-201ENST00000526271 CLUHP3Q96NS8 147 aa10.05□□□□□ -0.8
CPSF1-201ENST00000526271 NIPSNAP3BQ9BS92 247 aa10.05□□□□□ -0.8
CPSF1-201ENST00000526271 YTHDF2Q9Y5A9 579 aaKnown RBP10.05□□□□□ -0.8
CPSF1-201ENST00000526271 IGSF23A1L1A6 192 aa10.04□□□□□ -0.8
CPSF1-201ENST00000526271 SMIM9A6NGZ8 99 aa10.04□□□□□ -0.8
CPSF1-201ENST00000526271 A8MTW9 85 aa10.04□□□□□ -0.8
CPSF1-201ENST00000526271 CCNKO75909 580 aa10.04□□□□□ -0.8
CPSF1-201ENST00000526271 METTL15P1P0C7V9 234 aa10.04□□□□□ -0.8
CPSF1-201ENST00000526271 RD3LP0DJH9 198 aa10.04□□□□□ -0.8
CPSF1-201ENST00000526271 CAV2P51636 162 aa10.04□□□□□ -0.8
CPSF1-201ENST00000526271 ARL16Q0P5N6 197 aa10.04□□□□□ -0.8
CPSF1-201ENST00000526271 RNF212Q495C1 297 aa10.04□□□□□ -0.8
CPSF1-201ENST00000526271 FOXI2Q6ZQN5 318 aa10.04□□□□□ -0.8
CPSF1-201ENST00000526271 RNF125Q96EQ8 232 aa10.04□□□□□ -0.8
CPSF1-201ENST00000526271 MBD2Q9UBB5 411 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms