RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 PVALBP20472 110 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-216ENST00000526055 GSG1LQ6UXU4 331 aa13.39□□□□□ -0.27
TSPAN4-216ENST00000526055 ZNF546Q86UE3 836 aa13.39□□□□□ -0.27
TSPAN4-216ENST00000526055 PHLDA1Q8WV24 401 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-216ENST00000526055 C16orf92Q96LL3 132 aa13.39□□□□□ -0.27
TSPAN4-216ENST00000526055 RSG1Q9BU20 258 aa13.39□□□□□ -0.27
TSPAN4-216ENST00000526055 RPRMQ9NS64 109 aa13.39□□□□□ -0.27
TSPAN4-216ENST00000526055 EBLN2Q6P2I7 272 aa13.38□□□□□ -0.27
TSPAN4-216ENST00000526055 LSM5Q9Y4Y9 91 aaKnown RBP13.38□□□□□ -0.27
TSPAN4-216ENST00000526055 X6R8D5 127 aa13.38□□□□□ -0.27
TSPAN4-216ENST00000526055 IGHV4-28A0A0C4DH34 117 aa13.37□□□□□ -0.27
TSPAN4-216ENST00000526055 ARL16Q0P5N6 197 aa13.37□□□□□ -0.27
TSPAN4-216ENST00000526055 IL15RAQ13261 267 aa13.37□□□□□ -0.27
TSPAN4-216ENST00000526055 RGS21Q2M5E4 152 aa13.37□□□□□ -0.27
TSPAN4-216ENST00000526055 SCRT1Q9BWW7 348 aa13.37□□□□□ -0.27
TSPAN4-216ENST00000526055 C11orf1Q9H5F2 150 aa13.37□□□□□ -0.27
TSPAN4-216ENST00000526055 CLEC5AQ9NY25 188 aa13.37□□□□□ -0.27
TSPAN4-216ENST00000526055 DOK5Q9P104 306 aa13.37□□□□□ -0.27
TSPAN4-216ENST00000526055 GOSR2O14653 212 aa13.36□□□□□ -0.27
TSPAN4-216ENST00000526055 OR5G3P0C626 314 aa13.36□□□□□ -0.27
TSPAN4-216ENST00000526055 BCAP31P51572 246 aa13.36□□□□□ -0.27
TSPAN4-216ENST00000526055 CAV2P51636 162 aa13.36□□□□□ -0.27
TSPAN4-216ENST00000526055 GDF5OSQ5U4N7 250 aa13.36□□□□□ -0.27
TSPAN4-216ENST00000526055 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.36□□□□□ -0.27
TSPAN4-216ENST00000526055 NEU1Q99519 415 aa13.36□□□□□ -0.27
TSPAN4-216ENST00000526055 XCL2Q9UBD3 114 aa13.36□□□□□ -0.27
TSPAN4-216ENST00000526055 A0A0J9YX75 114 aa13.35□□□□□ -0.27
TSPAN4-216ENST00000526055 C11orf94C9JXX5 98 aa13.35□□□□□ -0.27
TSPAN4-216ENST00000526055 AGPAT2O15120 278 aa13.35□□□□□ -0.27
TSPAN4-216ENST00000526055 RBMY1A1P0DJD3 496 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-216ENST00000526055 RBMY1CP0DJD4 496 aa13.35□□□□□ -0.27
TSPAN4-216ENST00000526055 NANOS2P60321 138 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-216ENST00000526055 SLC38A11Q08AI6 406 aa13.35□□□□□ -0.27
TSPAN4-216ENST00000526055 RAB31Q13636 194 aa13.35□□□□□ -0.27
TSPAN4-216ENST00000526055 RBMY1FQ15415 496 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-216ENST00000526055 LINC00476Q8WZB0 136 aa13.35□□□□□ -0.27
TSPAN4-216ENST00000526055 C17orf77Q96MU5 243 aa13.35□□□□□ -0.27
TSPAN4-216ENST00000526055 ARL6Q9H0F7 186 aa13.35□□□□□ -0.27
TSPAN4-216ENST00000526055 LYRM2Q9NU23 88 aaPredicted RBP13.35□□□□□ -0.27
TSPAN4-216ENST00000526055 ELOA3CA0A087WX78 387 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-216ENST00000526055 A0A087X0K7 114 aa13.34□□□□□ -0.27
TSPAN4-216ENST00000526055 SMIM9A6NGZ8 99 aa13.34□□□□□ -0.27
TSPAN4-216ENST00000526055 A8MTW9 85 aa13.34□□□□□ -0.27
TSPAN4-216ENST00000526055 DEFB4AO15263 64 aa13.34□□□□□ -0.27
TSPAN4-216ENST00000526055 SSNA1O43805 119 aa13.34□□□□□ -0.27
TSPAN4-216ENST00000526055 TCTAP57738 103 aa13.34□□□□□ -0.27
TSPAN4-216ENST00000526055 PSG9Q00887 426 aa13.34□□□□□ -0.27
TSPAN4-216ENST00000526055 ZNF705AQ6ZN79 300 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-216ENST00000526055 OR4B1Q8NGF8 309 aa13.34□□□□□ -0.27
TSPAN4-216ENST00000526055 ARV1Q9H2C2 271 aa13.34□□□□□ -0.27
TSPAN4-216ENST00000526055 S100A11P31949 105 aa13.33□□□□□ -0.28
TSPAN4-216ENST00000526055 SULT1A1P50225 295 aa13.33□□□□□ -0.28
TSPAN4-216ENST00000526055 S100A10P60903 97 aa13.33□□□□□ -0.28
TSPAN4-216ENST00000526055 HBG1P69891 147 aa13.33□□□□□ -0.28
TSPAN4-216ENST00000526055 HBG2P69892 147 aa13.33□□□□□ -0.28
TSPAN4-216ENST00000526055 RAB32Q13637 225 aa13.33□□□□□ -0.28
TSPAN4-216ENST00000526055 VWC2Q2TAL6 325 aa13.33□□□□□ -0.28
TSPAN4-216ENST00000526055 FAM78BQ5VT40 261 aa13.33□□□□□ -0.28
TSPAN4-216ENST00000526055 STX12Q86Y82 276 aa13.33□□□□□ -0.28
TSPAN4-216ENST00000526055 ZNF709Q8N972 641 aa13.33□□□□□ -0.28
TSPAN4-216ENST00000526055 C20orf173Q96LM9 149 aa13.33□□□□□ -0.28
TSPAN4-216ENST00000526055 UHRF2Q96PU4 802 aa13.33□□□□□ -0.28
TSPAN4-216ENST00000526055 MGST2Q99735 147 aa13.33□□□□□ -0.28
TSPAN4-216ENST00000526055 UQCC1Q9NVA1 299 aa13.33□□□□□ -0.28
TSPAN4-216ENST00000526055 FAM24AA6NFZ4 105 aa13.32□□□□□ -0.28
TSPAN4-216ENST00000526055 ZNF705FA8MVS1 300 aaPredicted RBP13.32□□□□□ -0.28
TSPAN4-216ENST00000526055 CST7O76096 145 aa13.32□□□□□ -0.28
TSPAN4-216ENST00000526055 DUSP14O95147 198 aaKnown RBP13.32□□□□□ -0.28
TSPAN4-216ENST00000526055 ZNF705DP0CH99 300 aaPredicted RBP13.32□□□□□ -0.28
TSPAN4-216ENST00000526055 ZNF705BP0CI00 300 aaPredicted RBP13.32□□□□□ -0.28
TSPAN4-216ENST00000526055 CXCL2P19875 107 aa13.32□□□□□ -0.28
TSPAN4-216ENST00000526055 DEFB1P60022 68 aa13.32□□□□□ -0.28
TSPAN4-216ENST00000526055 CYCSP99999 105 aaKnown RBP13.32□□□□□ -0.28
TSPAN4-216ENST00000526055 PATE2Q6UY27 113 aa13.32□□□□□ -0.28
TSPAN4-216ENST00000526055 TMEM252Q8N6L7 170 aa13.32□□□□□ -0.28
TSPAN4-216ENST00000526055 WDR83OSQ9Y284 106 aa13.32□□□□□ -0.28
TSPAN4-216ENST00000526055 ALMS1Q8TCU4 4167 aa13.32□□□□□ -0.28
TSPAN4-216ENST00000526055 PLECQ15149 4684 aaKnown RBP13.31□□□□□ -0.28
TSPAN4-216ENST00000526055 TMEM189A5PLL7 270 aa13.31□□□□□ -0.28
TSPAN4-216ENST00000526055 IGKV3-20P01619 116 aa13.31□□□□□ -0.28
TSPAN4-216ENST00000526055 AMBPP02760 352 aa13.31□□□□□ -0.28
TSPAN4-216ENST00000526055 CAMLGP49069 296 aa13.31□□□□□ -0.28
TSPAN4-216ENST00000526055 ATP6V1FQ16864 119 aa13.31□□□□□ -0.28
TSPAN4-216ENST00000526055 Q6ZRG5 221 aa13.31□□□□□ -0.28
TSPAN4-216ENST00000526055 LINC00305Q7Z4B0 112 aa13.31□□□□□ -0.28
TSPAN4-216ENST00000526055 C2CD4CQ8TF44 421 aa13.31□□□□□ -0.28
TSPAN4-216ENST00000526055 CHAC2Q8WUX2 184 aa13.31□□□□□ -0.28
TSPAN4-216ENST00000526055 TRAV8-2A0A0B4J237 113 aa13.3□□□□□ -0.28
TSPAN4-216ENST00000526055 F6UB75 175 aa13.3□□□□□ -0.28
TSPAN4-216ENST00000526055 COX7A2P2O60397 106 aa13.3□□□□□ -0.28
TSPAN4-216ENST00000526055 RLN2P04090 185 aa13.3□□□□□ -0.28
TSPAN4-216ENST00000526055 FGL1Q08830 312 aa13.3□□□□□ -0.28
TSPAN4-216ENST00000526055 NMES1Q9C002 83 aa13.3□□□□□ -0.28
TSPAN4-216ENST00000526055 GOLT1BQ9Y3E0 138 aa13.3□□□□□ -0.28
TSPAN4-216ENST00000526055 ALG5Q9Y673 324 aa13.3□□□□□ -0.28
TSPAN4-216ENST00000526055 MRPS12O15235 138 aaKnown RBP13.29□□□□□ -0.28
TSPAN4-216ENST00000526055 LY6G6CO95867 125 aa13.29□□□□□ -0.28
TSPAN4-216ENST00000526055 HLA-DMBP28068 263 aa13.29□□□□□ -0.28
TSPAN4-216ENST00000526055 PRR20EP86478 221 aa13.29□□□□□ -0.28
TSPAN4-216ENST00000526055 PRR20CP86479 221 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms