RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.47□□□□□ -0.25
TSPAN4-215ENST00000525334 C16orf92Q96LL3 132 aa13.47□□□□□ -0.25
TSPAN4-215ENST00000525334 MGST2Q99735 147 aa13.47□□□□□ -0.25
TSPAN4-215ENST00000525334 MARVELD1Q9BSK0 173 aa13.47□□□□□ -0.25
TSPAN4-215ENST00000525334 ARL6Q9H0F7 186 aa13.47□□□□□ -0.25
TSPAN4-215ENST00000525334 C11orf68Q9H3H3 251 aaKnown RBP13.47□□□□□ -0.25
TSPAN4-215ENST00000525334 CLEC5AQ9NY25 188 aa13.47□□□□□ -0.25
TSPAN4-215ENST00000525334 PLECQ15149 4684 aaKnown RBP13.47□□□□□ -0.25
TSPAN4-215ENST00000525334 IGSF23A1L1A6 192 aa13.46□□□□□ -0.25
TSPAN4-215ENST00000525334 CXorf65A6NEN9 183 aa13.46□□□□□ -0.25
TSPAN4-215ENST00000525334 SULT1A1P50225 295 aa13.46□□□□□ -0.25
TSPAN4-215ENST00000525334 PATE2Q6UY27 113 aa13.46□□□□□ -0.25
TSPAN4-215ENST00000525334 FOXI2Q6ZQN5 318 aa13.46□□□□□ -0.25
TSPAN4-215ENST00000525334 TMEM252Q8N6L7 170 aa13.46□□□□□ -0.25
TSPAN4-215ENST00000525334 CSNK1G2-AS1Q8NCQ2 148 aa13.46□□□□□ -0.25
TSPAN4-215ENST00000525334 SAV1Q9H4B6 383 aaPredicted RBP13.46□□□□□ -0.25
TSPAN4-215ENST00000525334 DEFB4AO15263 64 aa13.45□□□□□ -0.26
TSPAN4-215ENST00000525334 NUTF2P61970 127 aaKnown RBP13.45□□□□□ -0.26
TSPAN4-215ENST00000525334 C20orf173Q96LM9 149 aa13.45□□□□□ -0.26
TSPAN4-215ENST00000525334 ARV1Q9H2C2 271 aa13.45□□□□□ -0.26
TSPAN4-215ENST00000525334 UQCC1Q9NVA1 299 aa13.45□□□□□ -0.26
TSPAN4-215ENST00000525334 IGKV3-20P01619 116 aa13.44□□□□□ -0.26
TSPAN4-215ENST00000525334 RPL7P18124 248 aaKnown RBP13.44□□□□□ -0.26
TSPAN4-215ENST00000525334 VWC2Q2TAL6 325 aa13.44□□□□□ -0.26
TSPAN4-215ENST00000525334 PXDC1Q5TGL8 231 aa13.44□□□□□ -0.26
TSPAN4-215ENST00000525334 S100A7AQ86SG5 101 aa13.44□□□□□ -0.26
TSPAN4-215ENST00000525334 STX12Q86Y82 276 aa13.44□□□□□ -0.26
TSPAN4-215ENST00000525334 Q8NAQ8 132 aa13.44□□□□□ -0.26
TSPAN4-215ENST00000525334 ZNF705EA8MWA4 302 aaPredicted RBP13.43□□□□□ -0.26
TSPAN4-215ENST00000525334 F6UB75 175 aa13.43□□□□□ -0.26
TSPAN4-215ENST00000525334 S100A11P31949 105 aa13.43□□□□□ -0.26
TSPAN4-215ENST00000525334 CAMLGP49069 296 aa13.43□□□□□ -0.26
TSPAN4-215ENST00000525334 HBG1P69891 147 aa13.43□□□□□ -0.26
TSPAN4-215ENST00000525334 HBG2P69892 147 aa13.43□□□□□ -0.26
TSPAN4-215ENST00000525334 C1QTNF4Q9BXJ3 329 aa13.43□□□□□ -0.26
TSPAN4-215ENST00000525334 NMES1Q9C002 83 aa13.43□□□□□ -0.26
TSPAN4-215ENST00000525334 RPRMQ9NS64 109 aa13.43□□□□□ -0.26
TSPAN4-215ENST00000525334 XCL2Q9UBD3 114 aa13.43□□□□□ -0.26
TSPAN4-215ENST00000525334 WDR83OSQ9Y284 106 aa13.43□□□□□ -0.26
TSPAN4-215ENST00000525334 X6R8D5 127 aa13.43□□□□□ -0.26
TSPAN4-215ENST00000525334 TRAV8-2A0A0B4J237 113 aa13.42□□□□□ -0.26
TSPAN4-215ENST00000525334 IGHV4-28A0A0C4DH34 117 aa13.42□□□□□ -0.26
TSPAN4-215ENST00000525334 UBE2L5PA0A1B0GUS4 154 aa13.42□□□□□ -0.26
TSPAN4-215ENST00000525334 NUPR2A6NF83 97 aa13.42□□□□□ -0.26
TSPAN4-215ENST00000525334 FGL1Q08830 312 aa13.42□□□□□ -0.26
TSPAN4-215ENST00000525334 RAB31Q13636 194 aa13.42□□□□□ -0.26
TSPAN4-215ENST00000525334 LRRC37A5PQ49AS3 106 aa13.42□□□□□ -0.26
TSPAN4-215ENST00000525334 SPATA31B1PQ5VZV4 182 aa13.42□□□□□ -0.26
TSPAN4-215ENST00000525334 EBLN2Q6P2I7 272 aa13.42□□□□□ -0.26
TSPAN4-215ENST00000525334 LINC00305Q7Z4B0 112 aa13.42□□□□□ -0.26
TSPAN4-215ENST00000525334 OR4B1Q8NGF8 309 aa13.42□□□□□ -0.26
TSPAN4-215ENST00000525334 ALMS1Q8TCU4 4167 aa13.42□□□□□ -0.26
TSPAN4-215ENST00000525334 DNAH1Q9P2D7 4330 aa13.42□□□□□ -0.26
TSPAN4-215ENST00000525334 A0A0J9YX75 114 aa13.41□□□□□ -0.26
TSPAN4-215ENST00000525334 SSNA1O43805 119 aa13.41□□□□□ -0.26
TSPAN4-215ENST00000525334 COX7A2P2O60397 106 aa13.41□□□□□ -0.26
TSPAN4-215ENST00000525334 MIFP14174 115 aa13.41□□□□□ -0.26
TSPAN4-215ENST00000525334 H2BFSP57053 126 aa13.41□□□□□ -0.26
TSPAN4-215ENST00000525334 FXYD7P58549 80 aa13.41□□□□□ -0.26
TSPAN4-215ENST00000525334 FAM78BQ5VT40 261 aa13.41□□□□□ -0.26
TSPAN4-215ENST00000525334 IGFL4Q6B9Z1 124 aa13.41□□□□□ -0.26
TSPAN4-215ENST00000525334 RNF182Q8N6D2 247 aa13.41□□□□□ -0.26
TSPAN4-215ENST00000525334 C11orf45Q8TAV5 145 aa13.41□□□□□ -0.26
TSPAN4-215ENST00000525334 TMEM37Q8WXS4 190 aa13.41□□□□□ -0.26
TSPAN4-215ENST00000525334 CLUHP3Q96NS8 147 aa13.41□□□□□ -0.26
TSPAN4-215ENST00000525334 OR5AC2Q9NZP5 309 aa13.41□□□□□ -0.26
TSPAN4-215ENST00000525334 A0A087X0K7 114 aa13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 E5RGE8 158 aa13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 MRPS12O15235 138 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 JTBO76095 146 aa13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 RLN2P04090 185 aa13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 RBMY1A1P0DJD3 496 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 RBMY1CP0DJD4 496 aa13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 NANOS2P60321 138 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 PRR20EP86478 221 aa13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 PRR20CP86479 221 aa13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 PRR20DP86480 221 aa13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 PRR20BP86481 221 aa13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 PRR20AP86496 221 aa13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 CYCSP99999 105 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 BAXQ07812 192 aa13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 RBMY1FQ15415 496 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 MIC13Q5XKP0 118 aa13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 CEMP1Q6PRD7 247 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 ZNF709Q8N972 641 aa13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 RNF24Q9Y225 148 aa13.4□□□□□ -0.26
TSPAN4-215ENST00000525334 ELOA3CA0A087WX78 387 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-215ENST00000525334 H0YIZ8 118 aa13.39□□□□□ -0.27
TSPAN4-215ENST00000525334 ATP6V1FQ16864 119 aa13.39□□□□□ -0.27
TSPAN4-215ENST00000525334 MORN5Q5VZ52 161 aa13.39□□□□□ -0.27
TSPAN4-215ENST00000525334 C10orf113Q5VZT2 155 aa13.39□□□□□ -0.27
TSPAN4-215ENST00000525334 Q6ZRG5 221 aa13.39□□□□□ -0.27
TSPAN4-215ENST00000525334 MFFQ9GZY8 342 aa13.39□□□□□ -0.27
TSPAN4-215ENST00000525334 SLC35B3Q9H1N7 401 aa13.39□□□□□ -0.27
TSPAN4-215ENST00000525334 FGF7P21781 194 aa13.38□□□□□ -0.27
TSPAN4-215ENST00000525334 PSG9Q00887 426 aa13.38□□□□□ -0.27
TSPAN4-215ENST00000525334 NHLH2Q02577 135 aa13.38□□□□□ -0.27
TSPAN4-215ENST00000525334 OPCMLQ14982 345 aa13.38□□□□□ -0.27
TSPAN4-215ENST00000525334 PHLDA1Q8WV24 401 aaPredicted RBP13.38□□□□□ -0.27
TSPAN4-215ENST00000525334 PPP1R1CQ8WVI7 109 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms