RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 RAB2AP61019 212 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 SELENOTP62341 195 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 PSMG4Q5JS54 123 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 FFAR4Q5NUL3 377 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 C10orf113Q5VZT2 155 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 SBSPONQ8IVN8 264 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 ZNF709Q8N972 641 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 INO80EQ8NBZ0 244 aaPredicted RBP3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 OR2K2Q8NGT1 345 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 SCGB1C1Q8TD33 95 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 DCANP1Q8TF63 244 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 C20orf173Q96LM9 149 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 LINC00052Q96N35 136 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 AQP10Q96PS8 301 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 SPAG8Q99932 426 aaPredicted RBP3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 FAM110AQ9BQ89 295 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 SHANK2-AS3Q9BTD1 123 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 MFFQ9GZY8 342 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 TMEM231Q9H6L2 316 aa3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 SEPSECSQ9HD40 501 aaKnown RBP3.42□□□□□ -1.86
CHMP4A-202ENST00000524955 NBEAL1Q6ZS30 2694 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 TRAV25A0A0B4J276 109 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 HELTA6NFD8 242 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 H3BQ15 152 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 SLC17A3O00476 420 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 OR10J4P0C629 311 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 ATF4P18848 351 aaPredicted RBP3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 ATP6V0CP27449 155 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 BMI1P35226 326 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 RPL29P47914 159 aaKnown RBP3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 PLP1P60201 277 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 PAFAH1B2P68402 229 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 RAB31Q13636 194 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 ACTL10Q5JWF8 245 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 GDF5OSQ5U4N7 250 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 FAM78BQ5VT40 261 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 FAM122CQ6P4D5 195 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 Q6ZRG5 221 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 AKAP14Q86UN6 197 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 BLNKQ8WV28 456 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 C16orf92Q96LL3 132 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 SLC25A2Q9BXI2 301 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 DNAJC4Q9NNZ3 241 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 NRN1Q9NPD7 142 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 CYTL1Q9NRR1 136 aa3.41□□□□□ -1.86
CHMP4A-202ENST00000524955 ELOA3CA0A087WX78 387 aaPredicted RBP3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 TRAV8-2A0A0B4J237 113 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 A0A1B0GV50 99 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 ZNF705FA8MVS1 300 aaPredicted RBP3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 C17orf112F2Z3M2 114 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 SOCS3O14543 225 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 MRPS12O15235 138 aaKnown RBP3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 CFDP00746 253 aaPredicted RBP3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 GALR1P47211 349 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 HAGHQ16775 308 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 LGALSLQ3ZCW2 172 aaPredicted RBP3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 C1orf194Q5T5A4 169 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 TMUB2Q71RG4 321 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 SSX7Q7RTT5 188 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 KCNRGQ8N5I3 272 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 OR1L4Q8NGR5 311 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 LRRC20Q8TCA0 184 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 ASB13Q8WXK3 278 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 ZNF503Q96F45 646 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 FAM167A-AS1Q96KT0 104 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 ZNF471Q9BX82 626 aaPredicted RBP3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 PARD6GQ9BYG4 376 aaPredicted RBP3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 ZNF586Q9NXT0 402 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 CLEC5AQ9NY25 188 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 PLA2G2EQ9NZK7 142 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 ZMAT5Q9UDW3 170 aaKnown RBP3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 PFDN2Q9UHV9 154 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 BOLA1Q9Y3E2 137 aa3.4□□□□□ -1.87
CHMP4A-202ENST00000524955 MGAM2Q2M2H8 2515 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 CMYA5Q8N3K9 4069 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 LOC102724200A0A096LPH7 203 aaPredicted RBP3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 BORCS7-ASMTA0A0B4J1R7 106 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 PRAC2D3DTV9 90 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 J3KRW8 73 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 M0R3E3 92 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 BCL2L11O43521 198 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 OR7C2O60412 319 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 PFDN1O60925 122 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 MPDU1O75352 247 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 RPL7P18124 248 aaKnown RBP3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 FHITP49789 147 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 FGF8P55075 233 aaPredicted RBP3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 SNRPD3P62318 126 aaKnown RBP3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 ZNF266Q14584 549 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 ZNF726P1Q15940 193 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 DEFB135Q30KP9 77 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 ACOT6Q3I5F7 207 aaPredicted RBP3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 LINC00322Q6ZN03 302 aaPredicted RBP3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 BPIFA4PQ86YQ2 179 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 STHQ8IWL8 128 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 IQCF2Q8IXL9 164 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 TCTE3Q8IZS6 198 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 EXOC3-AS1Q8N2X6 119 aa3.39□□□□□ -1.87
CHMP4A-202ENST00000524955 RPP25LQ8N5L8 163 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms