RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 SPTBN2O15020 2390 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 NDUFS7O75251 213 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 C2orf83Q53S99 150 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 ADAMTSL5Q6ZMM2 481 aa13.85□□□□□ -0.19
BEST1-203ENST00000524877 C10orf105Q8TEF2 133 aa13.84□□□□□ -0.19
BEST1-203ENST00000524877 GLMPQ8WWB7 406 aa13.84□□□□□ -0.19
BEST1-203ENST00000524877 TNFRSF18Q9Y5U5 241 aa13.84□□□□□ -0.19
BEST1-203ENST00000524877 LMO1P25800 156 aa13.84□□□□□ -0.19
BEST1-203ENST00000524877 FBXL19-AS1Q494R0 122 aa13.84□□□□□ -0.19
BEST1-203ENST00000524877 TMEM101Q96IK0 257 aa13.84□□□□□ -0.19
BEST1-203ENST00000524877 ZNF524Q96C55 264 aa13.84□□□□□ -0.19
BEST1-203ENST00000524877 CSTL1Q9H114 145 aa13.84□□□□□ -0.19
BEST1-203ENST00000524877 KAAG1Q9UBP8 84 aa13.84□□□□□ -0.19
BEST1-203ENST00000524877 GATA2P23769 480 aaPredicted RBP13.83□□□□□ -0.19
BEST1-203ENST00000524877 RNASE1P07998 156 aaKnown RBP13.83□□□□□ -0.2
BEST1-203ENST00000524877 NRGNQ92686 78 aa13.83□□□□□ -0.2
BEST1-203ENST00000524877 IL36BQ9NZH7 164 aa13.83□□□□□ -0.2
BEST1-203ENST00000524877 TRGV11A0A075B6L2 103 aa13.83□□□□□ -0.2
BEST1-203ENST00000524877 TNFRSF6BO95407 300 aa13.83□□□□□ -0.2
BEST1-203ENST00000524877 Q6ZS49 121 aa13.83□□□□□ -0.2
BEST1-203ENST00000524877 MIR17HGQ75NE6 70 aa13.83□□□□□ -0.2
BEST1-203ENST00000524877 SEPSECSQ9HD40 501 aaKnown RBP13.83□□□□□ -0.2
BEST1-203ENST00000524877 TMEM160Q9NX00 188 aa13.83□□□□□ -0.2
BEST1-203ENST00000524877 IGHV4-61A0A0C4DH41 118 aa13.82□□□□□ -0.2
BEST1-203ENST00000524877 RPL35AP18077 110 aaKnown RBP13.82□□□□□ -0.2
BEST1-203ENST00000524877 PMVKQ15126 192 aa13.82□□□□□ -0.2
BEST1-203ENST00000524877 CD5LO43866 347 aa13.82□□□□□ -0.2
BEST1-203ENST00000524877 C1QTNF4Q9BXJ3 329 aa13.82□□□□□ -0.2
BEST1-203ENST00000524877 KIAA1549LQ6ZVL6 1849 aa13.82□□□□□ -0.2
BEST1-203ENST00000524877 GAGE12JA6NER3 117 aa13.82□□□□□ -0.2
BEST1-203ENST00000524877 GAGE7O76087 117 aa13.82□□□□□ -0.2
BEST1-203ENST00000524877 GAGE12FP0CL80 117 aa13.82□□□□□ -0.2
BEST1-203ENST00000524877 GAGE12GP0CL81 117 aa13.82□□□□□ -0.2
BEST1-203ENST00000524877 GAGE12IP0CL82 117 aa13.82□□□□□ -0.2
BEST1-203ENST00000524877 SRSF3P84103 164 aaKnown RBP13.82□□□□□ -0.2
BEST1-203ENST00000524877 GAGE4Q13068 117 aa13.82□□□□□ -0.2
BEST1-203ENST00000524877 B5MCH6 92 aa13.82□□□□□ -0.2
BEST1-203ENST00000524877 VPREB3Q9UKI3 123 aa13.82□□□□□ -0.2
BEST1-203ENST00000524877 PEX7O00628 323 aa13.81□□□□□ -0.2
BEST1-203ENST00000524877 WDR86Q86TI4 376 aa13.81□□□□□ -0.2
BEST1-203ENST00000524877 ESPL1Q14674 2120 aa13.81□□□□□ -0.2
BEST1-203ENST00000524877 ATP6V0E1O15342 81 aa13.81□□□□□ -0.2
BEST1-203ENST00000524877 HOXB4P17483 251 aaPredicted RBP13.81□□□□□ -0.2
BEST1-203ENST00000524877 DTX2Q86UW9 622 aa13.81□□□□□ -0.2
BEST1-203ENST00000524877 MS4A6AQ9H2W1 248 aa13.81□□□□□ -0.2
BEST1-203ENST00000524877 ADMP35318 185 aa13.81□□□□□ -0.2
BEST1-203ENST00000524877 CIRBPQ14011 172 aaKnown RBP13.81□□□□□ -0.2
BEST1-203ENST00000524877 LRRC75A-AS1Q8N1F1 130 aa13.81□□□□□ -0.2
BEST1-203ENST00000524877 OR5AN1Q8NGI8 311 aa13.81□□□□□ -0.2
BEST1-203ENST00000524877 NAA38Q9BRA0 125 aaKnown RBP13.81□□□□□ -0.2
BEST1-203ENST00000524877 GZMBP10144 247 aa13.81□□□□□ -0.2
BEST1-203ENST00000524877 IFITM1P13164 125 aa13.81□□□□□ -0.2
BEST1-203ENST00000524877 DEFB112Q30KQ8 113 aa13.81□□□□□ -0.2
BEST1-203ENST00000524877 KLF12Q9Y4X4 402 aa13.81□□□□□ -0.2
BEST1-203ENST00000524877 A0A1B0GUS0 222 aa13.8□□□□□ -0.2
BEST1-203ENST00000524877 SYNJ2BPP57105 145 aa13.8□□□□□ -0.2
BEST1-203ENST00000524877 CD7P09564 240 aa13.8□□□□□ -0.2
BEST1-203ENST00000524877 MUC6Q6W4X9 2439 aa13.8□□□□□ -0.2
BEST1-203ENST00000524877 MYO7BQ6PIF6 2116 aa13.8□□□□□ -0.2
BEST1-203ENST00000524877 CD300EQ496F6 205 aaPredicted RBP13.79□□□□□ -0.2
BEST1-203ENST00000524877 FAM120AOSQ5T036 256 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 KIR2DL4Q99706 377 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 ATP5LO75964 103 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 HBBP68871 147 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 FOXL1Q12952 345 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 C2orf68Q2NKX9 166 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 MPV17L2Q567V2 206 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 ZNF833PQ6ZTB9 187 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 LINC00311Q8N616 119 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 QRFPP83859 136 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 DUX4L9Q6RFH8 374 aaPredicted RBP13.79□□□□□ -0.2
BEST1-203ENST00000524877 SEM1Q6ZVN7 128 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 DAZ1Q9NQZ3 744 aaKnown RBP13.79□□□□□ -0.2
BEST1-203ENST00000524877 TRAV21A0A0B4J279 112 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 GAGE12HA6NDE8 117 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 M0R381 172 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 KLF17Q5JT82 389 aaPredicted RBP13.79□□□□□ -0.2
BEST1-203ENST00000524877 ASCL2Q99929 193 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 DENND4CQ5VZ89 1909 aa13.79□□□□□ -0.2
BEST1-203ENST00000524877 OR9G4Q8NGQ1 327 aa13.78□□□□□ -0.2
BEST1-203ENST00000524877 SPANXDQ9BXN6 97 aa13.78□□□□□ -0.2
BEST1-203ENST00000524877 TRGV4A0A0C4DH28 118 aa13.78□□□□□ -0.2
BEST1-203ENST00000524877 SELENOKQ9Y6D0 94 aa13.78□□□□□ -0.2
BEST1-203ENST00000524877 TRAV2A0A0B4J234 112 aa13.78□□□□□ -0.2
BEST1-203ENST00000524877 IGKV3OR2-268A0A0C4DH90 116 aa13.78□□□□□ -0.2
BEST1-203ENST00000524877 LINC00473A8K010 186 aa13.78□□□□□ -0.2
BEST1-203ENST00000524877 FGF16O43320 207 aa13.78□□□□□ -0.2
BEST1-203ENST00000524877 RNF144BQ7Z419 303 aa13.78□□□□□ -0.2
BEST1-203ENST00000524877 ALPK3Q96L96 1907 aa13.78□□□□□ -0.2
BEST1-203ENST00000524877 TRGV9Q99603 122 aa13.78□□□□□ -0.2
BEST1-203ENST00000524877 PLXNB3Q9ULL4 1909 aa13.77□□□□□ -0.2
BEST1-203ENST00000524877 C17orf58Q2M2W7 97 aa13.77□□□□□ -0.2
BEST1-203ENST00000524877 SFTA2Q6UW10 78 aa13.77□□□□□ -0.2
BEST1-203ENST00000524877 CENPWQ5EE01 88 aa13.77□□□□□ -0.2
BEST1-203ENST00000524877 CIARTQ8N365 385 aaPredicted RBP13.77□□□□□ -0.2
BEST1-203ENST00000524877 COL6A6A6NMZ7 2263 aa13.77□□□□□ -0.21
BEST1-203ENST00000524877 PPP1R17O96001 155 aa13.77□□□□□ -0.21
BEST1-203ENST00000524877 OR10J3Q5JRS4 329 aa13.77□□□□□ -0.21
BEST1-203ENST00000524877 EPDR1Q9UM22 224 aa13.77□□□□□ -0.21
BEST1-203ENST00000524877 TRACP01848 142 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms