RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 INSL4Q14641 139 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 KISS1Q15726 138 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 USF2Q15853 346 aaPredicted RBP1.92□□□□□ -2.1
SKP1-212ENST00000523966 PSG3Q16557 428 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 TBC1D28Q2M2D7 210 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 BSXQ3C1V8 233 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 CEACAM21Q3KPI0 293 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 PABPC1L2AQ5JQF8 200 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 CLVS2Q5SYC1 327 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 TMEM42Q69YG0 159 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 LAMTOR1Q6IAA8 161 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 ANGPTL5Q86XS5 388 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 TOMM5Q8N4H5 51 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 CNEP1R1Q8N9A8 125 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 OR1M1Q8NGA1 313 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 OR51D1Q8NGF3 324 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 OR51A4Q8NGJ6 313 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 OR10AC1Q8NH08 325 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 DTD1Q8TEA8 209 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 SMIM4Q8WVI0 70 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 MUCL1Q96DR8 90 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 ADAT3Q96EY9 351 aaPredicted RBP1.92□□□□□ -2.1
SKP1-212ENST00000523966 REEP6Q96HR9 211 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 GPER1Q99527 375 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 HIGD2AQ9BW72 106 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 CHST5Q9GZS9 411 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 MIXL1Q9H2W2 232 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 METTL17Q9H7H0 456 aaPredicted RBP1.92□□□□□ -2.1
SKP1-212ENST00000523966 IFT46Q9NQC8 304 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 FAIMQ9NVQ4 179 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 ZNF586Q9NXT0 402 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 TAS2R4Q9NYW5 299 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 OR5V1Q9UGF6 321 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 V9GYH0 126 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 V9GYS6 101 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 MGAQ8IWI9 3026 aa1.92□□□□□ -2.1
SKP1-212ENST00000523966 IGHV2-26A0A0B4J1V2 119 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 TRAV8-2A0A0B4J237 113 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 A0A1B0GXF2 115 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 A6NED7 52 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 GGTLC3B5MD39 225 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 HSBP1L1C9JCN9 74 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 EEF1E1O43324 174 aaKnown RBP1.91□□□□□ -2.1
SKP1-212ENST00000523966 LYRM1O43325 122 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 PDCD6O75340 191 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 SNAPC5O75971 98 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 DHFRP00374 187 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 TRAPPC2P0DI81 140 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 TRAPPC2BP0DI82 140 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 PSKH1P11801 424 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 CDK2P24941 298 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 RBP2P50120 134 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 CLDN12P56749 244 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 GNG3P63215 75 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 MRPS15P82914 257 aaKnown RBP1.91□□□□□ -2.1
SKP1-212ENST00000523966 FAM3AP98173 230 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 RSU1Q15404 277 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 OR8B8Q15620 311 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 TIMM23BQ5SRD1 257 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 MRPL52Q86TS9 123 aaKnown RBP1.91□□□□□ -2.1
SKP1-212ENST00000523966 LYPD6Q86Y78 171 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 SNX29P2Q8IUI4 249 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 Q8IYB0 196 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 FER1L6-AS1Q8NA97 138 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 LY6G5BQ8NDX9 201 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 SLC30A7Q8NEW0 376 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 PXT1Q8NFP0 134 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 OR5A2Q8NGI9 324 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 OR51A2Q8NGJ7 313 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 OR5H6Q8NGV6 325 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 TNFAIP8L1Q8WVP5 186 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 SLC7A6Q92536 515 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 BORCS8Q96FH0 119 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 FAM210AQ96ND0 272 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 SLC25A21Q9BQT8 299 aaPredicted RBP1.91□□□□□ -2.1
SKP1-212ENST00000523966 METTL9Q9H1A3 318 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 ATG5Q9H1Y0 275 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 SPACA1Q9HBV2 294 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 SCP2D1Q9UJQ7 156 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 MPC1Q9Y5U8 109 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 KIAA2026Q5HYC2 2103 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 CELSR3Q9NYQ7 3312 aa1.91□□□□□ -2.1
SKP1-212ENST00000523966 FREM2Q5SZK8 3169 aa1.9□□□□□ -2.1
SKP1-212ENST00000523966 AKAP6Q13023 2319 aa1.9□□□□□ -2.1
SKP1-212ENST00000523966 DMDP11532 3685 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 PKD1L2Q7Z442 2459 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 DMXL2Q8TDJ6 3036 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 PIGBOS1A0A0B4J2F0 54 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 IGKV1-9A0A0C4DH69 117 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 PQLC2LA1A4F0 135 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 FUOMA2VDF0 154 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 A6NIN4 97 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 TMEM210A6NLX4 147 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 TMEM14DPA8MWL7 114 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 A8MWP4 228 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 ZNF736B4DX44 427 aaPredicted RBP1.9□□□□□ -2.11
SKP1-212ENST00000523966 EEF1E1-BLOC1S5C9J1V9 151 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 E7EQL1 145 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 TRAPPC2LH3BP13 241 aa1.9□□□□□ -2.11
SKP1-212ENST00000523966 H3BSH0 61 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms