RNA–Protein interactions for RNA: ENST00000523511.1

LSM1-205, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-205ENST00000523511 KMT2CQ8NEZ4 4911 aaKnown RBP11.88□□□□□ -0.51
LSM1-205ENST00000523511 INMT-MINDY4F8WBC2 141 aa11.88□□□□□ -0.51
LSM1-205ENST00000523511 AGPAT2O15120 278 aa11.88□□□□□ -0.51
LSM1-205ENST00000523511 SULT1A1P50225 295 aa11.88□□□□□ -0.51
LSM1-205ENST00000523511 FGL1Q08830 312 aa11.88□□□□□ -0.51
LSM1-205ENST00000523511 OR4B1Q8NGF8 309 aa11.88□□□□□ -0.51
LSM1-205ENST00000523511 UQCC1Q9NVA1 299 aa11.88□□□□□ -0.51
LSM1-205ENST00000523511 ZNF705EA8MWA4 302 aaPredicted RBP11.87□□□□□ -0.51
LSM1-205ENST00000523511 H3BRN7 92 aa11.87□□□□□ -0.51
LSM1-205ENST00000523511 CCNKO75909 580 aa11.87□□□□□ -0.51
LSM1-205ENST00000523511 DUSP14O95147 198 aaKnown RBP11.87□□□□□ -0.51
LSM1-205ENST00000523511 CAMLGP49069 296 aa11.87□□□□□ -0.51
LSM1-205ENST00000523511 SLC25A31Q9H0C2 315 aa11.87□□□□□ -0.51
LSM1-205ENST00000523511 ARV1Q9H2C2 271 aa11.87□□□□□ -0.51
LSM1-205ENST00000523511 LYRM2Q9NU23 88 aaPredicted RBP11.87□□□□□ -0.51
LSM1-205ENST00000523511 FAM24AA6NFZ4 105 aa11.86□□□□□ -0.51
LSM1-205ENST00000523511 SOCS3O14543 225 aa11.86□□□□□ -0.51
LSM1-205ENST00000523511 COX7A2P2O60397 106 aa11.86□□□□□ -0.51
LSM1-205ENST00000523511 CST7O76096 145 aa11.86□□□□□ -0.51
LSM1-205ENST00000523511 GIG44P09565 113 aaPredicted RBP11.86□□□□□ -0.51
LSM1-205ENST00000523511 PSG9Q00887 426 aa11.86□□□□□ -0.51
LSM1-205ENST00000523511 RAB32Q13637 225 aa11.86□□□□□ -0.51
LSM1-205ENST00000523511 NRARPQ7Z6K4 114 aa11.86□□□□□ -0.51
LSM1-205ENST00000523511 OR1L4Q8NGR5 311 aa11.86□□□□□ -0.51
LSM1-205ENST00000523511 PHLDA1Q8WV24 401 aaPredicted RBP11.86□□□□□ -0.51
LSM1-205ENST00000523511 SCRT1Q9BWW7 348 aa11.86□□□□□ -0.51
LSM1-205ENST00000523511 HRH4Q9H3N8 390 aa11.86□□□□□ -0.51
LSM1-205ENST00000523511 CLEC5AQ9NY25 188 aa11.86□□□□□ -0.51
LSM1-205ENST00000523511 XCL2Q9UBD3 114 aa11.86□□□□□ -0.51
LSM1-205ENST00000523511 SMIM9A6NGZ8 99 aa11.85□□□□□ -0.51
LSM1-205ENST00000523511 C11orf94C9JXX5 98 aa11.85□□□□□ -0.51
LSM1-205ENST00000523511 IGKV3-20P01619 116 aa11.85□□□□□ -0.51
LSM1-205ENST00000523511 C4BPBP20851 252 aa11.85□□□□□ -0.51
LSM1-205ENST00000523511 ARL16Q0P5N6 197 aa11.85□□□□□ -0.51
LSM1-205ENST00000523511 LINC00305Q7Z4B0 112 aa11.85□□□□□ -0.51
LSM1-205ENST00000523511 BPIFA4PQ86YQ2 179 aa11.85□□□□□ -0.51
LSM1-205ENST00000523511 TMEM252Q8N6L7 170 aa11.85□□□□□ -0.51
LSM1-205ENST00000523511 CSNK1G2-AS1Q8NCQ2 148 aa11.85□□□□□ -0.51
LSM1-205ENST00000523511 PFDN5Q99471 154 aa11.85□□□□□ -0.51
LSM1-205ENST00000523511 MARVELD1Q9BSK0 173 aa11.85□□□□□ -0.51
LSM1-205ENST00000523511 NMES1Q9C002 83 aa11.85□□□□□ -0.51
LSM1-205ENST00000523511 DNAJC4Q9NNZ3 241 aa11.85□□□□□ -0.51
LSM1-205ENST00000523511 DNAH7Q8WXX0 4024 aa11.85□□□□□ -0.51
LSM1-205ENST00000523511 E5RGE8 158 aa11.84□□□□□ -0.51
LSM1-205ENST00000523511 SSNA1O43805 119 aa11.84□□□□□ -0.51
LSM1-205ENST00000523511 MPDU1O75352 247 aa11.84□□□□□ -0.51
LSM1-205ENST00000523511 AMBPP02760 352 aa11.84□□□□□ -0.51
LSM1-205ENST00000523511 IL15RAQ13261 267 aa11.84□□□□□ -0.51
LSM1-205ENST00000523511 FAM78BQ5VT40 261 aa11.84□□□□□ -0.51
LSM1-205ENST00000523511 C10orf113Q5VZT2 155 aa11.84□□□□□ -0.51
LSM1-205ENST00000523511 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.84□□□□□ -0.51
LSM1-205ENST00000523511 GOLT1BQ9Y3E0 138 aa11.84□□□□□ -0.51
LSM1-205ENST00000523511 IGHV4-28A0A0C4DH34 117 aa11.83□□□□□ -0.52
LSM1-205ENST00000523511 A0A0J9YX75 114 aa11.83□□□□□ -0.52
LSM1-205ENST00000523511 TMEM189A5PLL7 270 aa11.83□□□□□ -0.52
LSM1-205ENST00000523511 DEFB4AO15263 64 aa11.83□□□□□ -0.52
LSM1-205ENST00000523511 PET100P0DJ07 73 aa11.83□□□□□ -0.52
LSM1-205ENST00000523511 CXCL2P19875 107 aa11.83□□□□□ -0.52
LSM1-205ENST00000523511 TCTAP57738 103 aa11.83□□□□□ -0.52
LSM1-205ENST00000523511 IFITM3Q01628 133 aa11.83□□□□□ -0.52
LSM1-205ENST00000523511 EWSR1Q01844 656 aaKnown RBP eCLIP11.83□□□□□ -0.52
LSM1-205ENST00000523511 BAXQ07812 192 aa11.83□□□□□ -0.52
LSM1-205ENST00000523511 Q8NAQ8 132 aa11.83□□□□□ -0.52
LSM1-205ENST00000523511 UHRF2Q96PU4 802 aa11.83□□□□□ -0.52
LSM1-205ENST00000523511 NEU1Q99519 415 aa11.83□□□□□ -0.52
LSM1-205ENST00000523511 MGST2Q99735 147 aa11.83□□□□□ -0.52
LSM1-205ENST00000523511 PPP1R14DQ9NXH3 145 aa11.83□□□□□ -0.52
LSM1-205ENST00000523511 WDR83OSQ9Y284 106 aa11.83□□□□□ -0.52
LSM1-205ENST00000523511 A0A087X0K7 114 aa11.82□□□□□ -0.52
LSM1-205ENST00000523511 RPL29P47914 159 aaKnown RBP11.82□□□□□ -0.52
LSM1-205ENST00000523511 NANOS2P60321 138 aaKnown RBP11.82□□□□□ -0.52
LSM1-205ENST00000523511 VWC2Q2TAL6 325 aa11.82□□□□□ -0.52
LSM1-205ENST00000523511 GDF5OSQ5U4N7 250 aa11.82□□□□□ -0.52
LSM1-205ENST00000523511 PATE2Q6UY27 113 aa11.82□□□□□ -0.52
LSM1-205ENST00000523511 ZNF738Q8NE65 137 aa11.82□□□□□ -0.52
LSM1-205ENST00000523511 C11orf1Q9H5F2 150 aa11.82□□□□□ -0.52
LSM1-205ENST00000523511 X6R8D5 127 aa11.82□□□□□ -0.52
LSM1-205ENST00000523511 GUK1Q16774 197 aa11.81□□□□□ -0.52
LSM1-205ENST00000523511 LCN15Q6UWW0 184 aa11.81□□□□□ -0.52
LSM1-205ENST00000523511 C2CD4CQ8TF44 421 aa11.81□□□□□ -0.52
LSM1-205ENST00000523511 CHAC2Q8WUX2 184 aa11.81□□□□□ -0.52
LSM1-205ENST00000523511 SLC50A1Q9BRV3 221 aa11.81□□□□□ -0.52
LSM1-205ENST00000523511 IGHV3OR16-12A0A075B7B8 117 aa11.8□□□□□ -0.52
LSM1-205ENST00000523511 UBE2L5PA0A1B0GUS4 154 aa11.8□□□□□ -0.52
LSM1-205ENST00000523511 RBMY1A1P0DJD3 496 aaKnown RBP11.8□□□□□ -0.52
LSM1-205ENST00000523511 RBMY1CP0DJD4 496 aa11.8□□□□□ -0.52
LSM1-205ENST00000523511 B2MP61769 119 aa11.8□□□□□ -0.52
LSM1-205ENST00000523511 RBMY1FQ15415 496 aaKnown RBP11.8□□□□□ -0.52
LSM1-205ENST00000523511 PSG3Q16557 428 aa11.8□□□□□ -0.52
LSM1-205ENST00000523511 ZNF709Q8N972 641 aa11.8□□□□□ -0.52
LSM1-205ENST00000523511 TMEM208Q9BTX3 173 aa11.8□□□□□ -0.52
LSM1-205ENST00000523511 TEX48A0A1B0GUV7 120 aa11.79□□□□□ -0.52
LSM1-205ENST00000523511 IGSF23A1L1A6 192 aa11.79□□□□□ -0.52
LSM1-205ENST00000523511 F6UB75 175 aa11.79□□□□□ -0.52
LSM1-205ENST00000523511 SIX6O95475 246 aa11.79□□□□□ -0.52
LSM1-205ENST00000523511 LY6G6CO95867 125 aa11.79□□□□□ -0.52
LSM1-205ENST00000523511 FGF7P21781 194 aa11.79□□□□□ -0.52
LSM1-205ENST00000523511 FXYD7P58549 80 aa11.79□□□□□ -0.52
LSM1-205ENST00000523511 RHOBP62745 196 aa11.79□□□□□ -0.52
LSM1-205ENST00000523511 PRR20EP86478 221 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms