RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 PRRT1Q99946 306 aa15.82■□□□□ 0.12
PVT1-218ENST00000523328 CFDP00746 253 aaPredicted RBP15.81■□□□□ 0.12
PVT1-218ENST00000523328 GGNBP1Q5YKI7 109 aa15.81■□□□□ 0.12
PVT1-218ENST00000523328 RNF182Q8N6D2 247 aa15.81■□□□□ 0.12
PVT1-218ENST00000523328 OR1B1Q8NGR6 318 aa15.81■□□□□ 0.12
PVT1-218ENST00000523328 OR1S1Q8NH92 325 aa15.81■□□□□ 0.12
PVT1-218ENST00000523328 CLINT1Q14677 625 aa15.8■□□□□ 0.12
PVT1-218ENST00000523328 TMEM182Q6ZP80 229 aaPredicted RBP15.8■□□□□ 0.12
PVT1-218ENST00000523328 GPR82Q96P67 336 aa15.8■□□□□ 0.12
PVT1-218ENST00000523328 SLC25A39Q9BZJ4 359 aaPredicted RBP15.8■□□□□ 0.12
PVT1-218ENST00000523328 BOLA2-SMG1P6H3BVE0 249 aa15.79■□□□□ 0.12
PVT1-218ENST00000523328 PITX3O75364 302 aa15.79■□□□□ 0.12
PVT1-218ENST00000523328 GATA2P23769 480 aaPredicted RBP15.79■□□□□ 0.12
PVT1-218ENST00000523328 RAB11AP62491 216 aa15.79■□□□□ 0.12
PVT1-218ENST00000523328 CLVS1Q8IUQ0 354 aaPredicted RBP15.79■□□□□ 0.12
PVT1-218ENST00000523328 PRSS46E5RG02 174 aa15.78■□□□□ 0.12
PVT1-218ENST00000523328 IAPPP10997 89 aa15.78■□□□□ 0.12
PVT1-218ENST00000523328 AKR1C4P17516 323 aa15.78■□□□□ 0.12
PVT1-218ENST00000523328 ORM2P19652 201 aa15.78■□□□□ 0.12
PVT1-218ENST00000523328 BTF3P20290 206 aaKnown RBP15.78■□□□□ 0.12
PVT1-218ENST00000523328 TAS2R60P59551 318 aa15.78■□□□□ 0.12
PVT1-218ENST00000523328 TMEM256Q8N2U0 113 aa15.78■□□□□ 0.12
PVT1-218ENST00000523328 C16orf74Q96GX8 76 aa15.78■□□□□ 0.12
PVT1-218ENST00000523328 LINC01587Q99440 93 aa15.78■□□□□ 0.12
PVT1-218ENST00000523328 Q9H3A6 140 aa15.78■□□□□ 0.12
PVT1-218ENST00000523328 CTDSP2O14595 271 aa15.77■□□□□ 0.12
PVT1-218ENST00000523328 TTC32Q5I0X7 151 aa15.77■□□□□ 0.12
PVT1-218ENST00000523328 PAIP2BQ9ULR5 123 aaKnown RBP15.77■□□□□ 0.12
PVT1-218ENST00000523328 TIMM8BQ9Y5J9 83 aaPredicted RBP15.77■□□□□ 0.12
PVT1-218ENST00000523328 RGS5O15539 181 aa15.76■□□□□ 0.11
PVT1-218ENST00000523328 SRPXP78539 464 aa15.76■□□□□ 0.11
PVT1-218ENST00000523328 FGL1Q08830 312 aa15.76■□□□□ 0.11
PVT1-218ENST00000523328 ZNF738Q8NE65 137 aa15.76■□□□□ 0.11
PVT1-218ENST00000523328 BPIFCQ8NFQ6 507 aa15.76■□□□□ 0.11
PVT1-218ENST00000523328 ANKRD20A5PA0PJZ0 165 aa15.75■□□□□ 0.11
PVT1-218ENST00000523328 CTDSPLO15194 276 aa15.75■□□□□ 0.11
PVT1-218ENST00000523328 HTN1P15515 57 aa15.75■□□□□ 0.11
PVT1-218ENST00000523328 RNASE8Q8TDE3 154 aaKnown RBP15.75■□□□□ 0.11
PVT1-218ENST00000523328 SCGB3A2Q96PL1 93 aa15.75■□□□□ 0.11
PVT1-218ENST00000523328 UHRF2Q96PU4 802 aa15.75■□□□□ 0.11
PVT1-218ENST00000523328 UPK3BQ9BT76 320 aa15.75■□□□□ 0.11
PVT1-218ENST00000523328 TMEM147Q9BVK8 224 aa15.75■□□□□ 0.11
PVT1-218ENST00000523328 NOP10Q9NPE3 64 aaKnown RBP15.75■□□□□ 0.11
PVT1-218ENST00000523328 SCP2D1Q9UJQ7 156 aa15.75■□□□□ 0.11
PVT1-218ENST00000523328 DMBT1Q9UGM3 2413 aaPredicted RBP15.75■□□□□ 0.11
PVT1-218ENST00000523328 H3BRN7 92 aa15.74■□□□□ 0.11
PVT1-218ENST00000523328 HIST1H1AQ02539 215 aaPredicted RBP15.74■□□□□ 0.11
PVT1-218ENST00000523328 OR8A1Q8NGG7 326 aa15.74■□□□□ 0.11
PVT1-218ENST00000523328 GNPNAT1Q96EK6 184 aaPredicted RBP15.74■□□□□ 0.11
PVT1-218ENST00000523328 TRAV26-1A0A087WT03 109 aa15.73■□□□□ 0.11
PVT1-218ENST00000523328 ANXA3P12429 323 aa15.73■□□□□ 0.11
PVT1-218ENST00000523328 RHOBP62745 196 aa15.73■□□□□ 0.11
PVT1-218ENST00000523328 ZNF493Q6ZR52 646 aa15.73■□□□□ 0.11
PVT1-218ENST00000523328 TMEM144Q7Z5S9 345 aa15.73■□□□□ 0.11
PVT1-218ENST00000523328 RXFP4Q8TDU9 374 aa15.73■□□□□ 0.11
PVT1-218ENST00000523328 ZNF503Q96F45 646 aa15.73■□□□□ 0.11
PVT1-218ENST00000523328 DUXBA0A1W2PPF3 345 aa15.72■□□□□ 0.11
PVT1-218ENST00000523328 A0A1W2PPQ1 181 aa15.72■□□□□ 0.11
PVT1-218ENST00000523328 CXCL3P19876 107 aa15.72■□□□□ 0.11
PVT1-218ENST00000523328 S100A7P31151 101 aa15.72■□□□□ 0.11
PVT1-218ENST00000523328 OR5I1Q13606 314 aa15.72■□□□□ 0.11
PVT1-218ENST00000523328 IL18Q14116 193 aa15.72■□□□□ 0.11
PVT1-218ENST00000523328 LINC00612Q8N6U2 182 aa15.72■□□□□ 0.11
PVT1-218ENST00000523328 TMEM263Q8WUH6 116 aaKnown RBP15.72■□□□□ 0.11
PVT1-218ENST00000523328 SHANK2-AS3Q9BTD1 123 aa15.72■□□□□ 0.11
PVT1-218ENST00000523328 FAT1Q14517 4588 aa15.72■□□□□ 0.11
PVT1-218ENST00000523328 EPM2AB3EWF7 344 aa15.71■□□□□ 0.11
PVT1-218ENST00000523328 ESRGQ1W209 222 aa15.71■□□□□ 0.11
PVT1-218ENST00000523328 OR10J6PQ8NGY7 276 aa15.71■□□□□ 0.11
PVT1-218ENST00000523328 CIB3Q96Q77 187 aaPredicted RBP15.71■□□□□ 0.11
PVT1-218ENST00000523328 ZNF701M0R085 212 aaPredicted RBP15.7■□□□□ 0.1
PVT1-218ENST00000523328 MED6O75586 246 aa15.7■□□□□ 0.1
PVT1-218ENST00000523328 PRB4P10163 310 aaPredicted RBP15.7■□□□□ 0.1
PVT1-218ENST00000523328 SLC25A6P12236 298 aa15.7■□□□□ 0.1
PVT1-218ENST00000523328 RPL7P18124 248 aaKnown RBP15.7■□□□□ 0.1
PVT1-218ENST00000523328 M6PRP20645 277 aa15.7■□□□□ 0.1
PVT1-218ENST00000523328 DLK1P80370 383 aa15.7■□□□□ 0.1
PVT1-218ENST00000523328 AKR1C1Q04828 323 aa15.7■□□□□ 0.1
PVT1-218ENST00000523328 DIRAS2Q96HU8 199 aa15.7■□□□□ 0.1
PVT1-218ENST00000523328 MCUBQ9NWR8 336 aa15.7■□□□□ 0.1
PVT1-218ENST00000523328 PPP1R14DQ9NXH3 145 aa15.7■□□□□ 0.1
PVT1-218ENST00000523328 A0A087X0K7 114 aa15.69■□□□□ 0.1
PVT1-218ENST00000523328 PIGBOS1A0A0B4J2F0 54 aa15.69■□□□□ 0.1
PVT1-218ENST00000523328 A0A0J9YY99 117 aa15.69■□□□□ 0.1
PVT1-218ENST00000523328 WRBO00258 174 aa15.69■□□□□ 0.1
PVT1-218ENST00000523328 SYNGR2O43760 224 aa15.69■□□□□ 0.1
PVT1-218ENST00000523328 HOXA5P20719 270 aa15.69■□□□□ 0.1
PVT1-218ENST00000523328 CDKN1BP46527 198 aa15.69■□□□□ 0.1
PVT1-218ENST00000523328 RPP30P78346 268 aaKnown RBP15.69■□□□□ 0.1
PVT1-218ENST00000523328 PSG3Q16557 428 aa15.69■□□□□ 0.1
PVT1-218ENST00000523328 ACOT7LQ6ZUV0 252 aa15.69■□□□□ 0.1
PVT1-218ENST00000523328 ZNF586Q9NXT0 402 aa15.69■□□□□ 0.1
PVT1-218ENST00000523328 MRPS16Q9Y3D3 137 aaKnown RBP15.69■□□□□ 0.1
PVT1-218ENST00000523328 H7BYZ3 331 aa15.68■□□□□ 0.1
PVT1-218ENST00000523328 LRTM2Q8N967 370 aa15.68■□□□□ 0.1
PVT1-218ENST00000523328 RABL2AQ9UBK7 228 aaPredicted RBP15.68■□□□□ 0.1
PVT1-218ENST00000523328 RABL2BQ9UNT1 228 aa15.68■□□□□ 0.1
PVT1-218ENST00000523328 HIGD1AQ9Y241 93 aa15.68■□□□□ 0.1
PVT1-218ENST00000523328 RAP2BP61225 183 aa15.67■□□□□ 0.1
PVT1-218ENST00000523328 KIR3DS1Q14943 382 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms