RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 TMEM37Q8WXS4 190 aa13.03□□□□□ -0.32
CLK4-211ENST00000522556 RNF126Q9BV68 326 aa13.03□□□□□ -0.32
CLK4-211ENST00000522556 ARV1Q9H2C2 271 aa13.03□□□□□ -0.32
CLK4-211ENST00000522556 CSMD3Q7Z407 3707 aa13.03□□□□□ -0.32
CLK4-211ENST00000522556 TRAV8-2A0A0B4J237 113 aa13.02□□□□□ -0.33
CLK4-211ENST00000522556 H3BMM0 161 aa13.02□□□□□ -0.33
CLK4-211ENST00000522556 PTTG1O95997 202 aa13.02□□□□□ -0.33
CLK4-211ENST00000522556 SNRPCP09234 159 aaKnown RBP13.02□□□□□ -0.33
CLK4-211ENST00000522556 GALR1P47211 349 aa13.02□□□□□ -0.33
CLK4-211ENST00000522556 CAMLGP49069 296 aa13.02□□□□□ -0.33
CLK4-211ENST00000522556 PSMB3P49720 205 aa13.02□□□□□ -0.33
CLK4-211ENST00000522556 STX12Q86Y82 276 aa13.02□□□□□ -0.33
CLK4-211ENST00000522556 MRPS12O15235 138 aaKnown RBP13.01□□□□□ -0.33
CLK4-211ENST00000522556 IGKV3-20P01619 116 aa13.01□□□□□ -0.33
CLK4-211ENST00000522556 FGF7P21781 194 aa13.01□□□□□ -0.33
CLK4-211ENST00000522556 HLA-DMBP28068 263 aa13.01□□□□□ -0.33
CLK4-211ENST00000522556 PRR20EP86478 221 aa13.01□□□□□ -0.33
CLK4-211ENST00000522556 PRR20CP86479 221 aa13.01□□□□□ -0.33
CLK4-211ENST00000522556 PRR20DP86480 221 aa13.01□□□□□ -0.33
CLK4-211ENST00000522556 PRR20BP86481 221 aa13.01□□□□□ -0.33
CLK4-211ENST00000522556 PRR20AP86496 221 aa13.01□□□□□ -0.33
CLK4-211ENST00000522556 BAXQ07812 192 aa13.01□□□□□ -0.33
CLK4-211ENST00000522556 OPCMLQ14982 345 aa13.01□□□□□ -0.33
CLK4-211ENST00000522556 RNF182Q8N6D2 247 aa13.01□□□□□ -0.33
CLK4-211ENST00000522556 THAP6Q8TBB0 222 aa13.01□□□□□ -0.33
CLK4-211ENST00000522556 SEPSECSQ9HD40 501 aaKnown RBP13.01□□□□□ -0.33
CLK4-211ENST00000522556 E5RGE8 158 aa13□□□□□ -0.33
CLK4-211ENST00000522556 ISLRO14498 428 aa13□□□□□ -0.33
CLK4-211ENST00000522556 DEFB4AO15263 64 aa13□□□□□ -0.33
CLK4-211ENST00000522556 MPC2O95563 127 aa13□□□□□ -0.33
CLK4-211ENST00000522556 HLA-DRB4P13762 266 aa13□□□□□ -0.33
CLK4-211ENST00000522556 S100A11P31949 105 aa13□□□□□ -0.33
CLK4-211ENST00000522556 FXYD7P58549 80 aa13□□□□□ -0.33
CLK4-211ENST00000522556 FGL1Q08830 312 aa13□□□□□ -0.33
CLK4-211ENST00000522556 CLINT1Q14677 625 aa13□□□□□ -0.33
CLK4-211ENST00000522556 LINC00305Q7Z4B0 112 aa13□□□□□ -0.33
CLK4-211ENST00000522556 OR5C1Q8NGR4 320 aa13□□□□□ -0.33
CLK4-211ENST00000522556 OR11H2Q8NH07 326 aa13□□□□□ -0.33
CLK4-211ENST00000522556 HLA-DRB4X5D2U9 266 aa13□□□□□ -0.33
CLK4-211ENST00000522556 H3BTX0 84 aa12.99□□□□□ -0.33
CLK4-211ENST00000522556 COX7A2P2O60397 106 aa12.99□□□□□ -0.33
CLK4-211ENST00000522556 SPP1P10451 314 aa12.99□□□□□ -0.33
CLK4-211ENST00000522556 HBG1P69891 147 aa12.99□□□□□ -0.33
CLK4-211ENST00000522556 HBG2P69892 147 aa12.99□□□□□ -0.33
CLK4-211ENST00000522556 FCN2Q15485 313 aa12.99□□□□□ -0.33
CLK4-211ENST00000522556 GCSAMLQ5JQS6 135 aa12.99□□□□□ -0.33
CLK4-211ENST00000522556 OR11H7Q8NGC8 314 aa12.99□□□□□ -0.33
CLK4-211ENST00000522556 IL17DQ8TAD2 202 aa12.99□□□□□ -0.33
CLK4-211ENST00000522556 C16orf92Q96LL3 132 aa12.99□□□□□ -0.33
CLK4-211ENST00000522556 RARRES2Q99969 163 aa12.99□□□□□ -0.33
CLK4-211ENST00000522556 SAV1Q9H4B6 383 aaPredicted RBP12.99□□□□□ -0.33
CLK4-211ENST00000522556 MBD2Q9UBB5 411 aa12.99□□□□□ -0.33
CLK4-211ENST00000522556 TRAV5A0A0B4J249 113 aa12.98□□□□□ -0.33
CLK4-211ENST00000522556 ZNF705DP0CH99 300 aaPredicted RBP12.98□□□□□ -0.33
CLK4-211ENST00000522556 ZNF705BP0CI00 300 aaPredicted RBP12.98□□□□□ -0.33
CLK4-211ENST00000522556 ID1P41134 155 aa12.98□□□□□ -0.33
CLK4-211ENST00000522556 CYCSP99999 105 aaKnown RBP12.98□□□□□ -0.33
CLK4-211ENST00000522556 CSNK1G2-AS1Q8NCQ2 148 aa12.98□□□□□ -0.33
CLK4-211ENST00000522556 GATAD1Q8WUU5 269 aa12.98□□□□□ -0.33
CLK4-211ENST00000522556 GPR82Q96P67 336 aa12.98□□□□□ -0.33
CLK4-211ENST00000522556 XCL2Q9UBD3 114 aa12.98□□□□□ -0.33
CLK4-211ENST00000522556 PXMP4Q9Y6I8 212 aa12.98□□□□□ -0.33
CLK4-211ENST00000522556 RLN2P04090 185 aa12.97□□□□□ -0.33
CLK4-211ENST00000522556 RPL7P18124 248 aaKnown RBP12.97□□□□□ -0.33
CLK4-211ENST00000522556 ATF4P18848 351 aaPredicted RBP12.97□□□□□ -0.33
CLK4-211ENST00000522556 MEOX2P50222 304 aa12.97□□□□□ -0.33
CLK4-211ENST00000522556 B2MP61769 119 aa12.97□□□□□ -0.33
CLK4-211ENST00000522556 PMS2P11Q13670 270 aa12.97□□□□□ -0.33
CLK4-211ENST00000522556 C10orf113Q5VZT2 155 aa12.97□□□□□ -0.33
CLK4-211ENST00000522556 MORN3Q6PF18 240 aaPredicted RBP12.97□□□□□ -0.33
CLK4-211ENST00000522556 FOXI2Q6ZQN5 318 aa12.97□□□□□ -0.33
CLK4-211ENST00000522556 ZNF709Q8N972 641 aa12.97□□□□□ -0.33
CLK4-211ENST00000522556 NPCDR1Q9BY65 106 aa12.97□□□□□ -0.33
CLK4-211ENST00000522556 SLC35B3Q9H1N7 401 aa12.97□□□□□ -0.33
CLK4-211ENST00000522556 SLC39A9Q9NUM3 307 aa12.97□□□□□ -0.33
CLK4-211ENST00000522556 X6R8D5 127 aa12.97□□□□□ -0.33
CLK4-211ENST00000522556 A0A087X0K7 114 aa12.96□□□□□ -0.33
CLK4-211ENST00000522556 A0A0J9YX75 114 aa12.96□□□□□ -0.33
CLK4-211ENST00000522556 SLC17A3O00476 420 aa12.96□□□□□ -0.33
CLK4-211ENST00000522556 RPL29P47914 159 aaKnown RBP12.96□□□□□ -0.33
CLK4-211ENST00000522556 ATP6V1FQ16864 119 aa12.96□□□□□ -0.33
CLK4-211ENST00000522556 PXDC1Q5TGL8 231 aa12.96□□□□□ -0.33
CLK4-211ENST00000522556 FAM78BQ5VT40 261 aa12.96□□□□□ -0.33
CLK4-211ENST00000522556 Q8NAQ8 132 aa12.96□□□□□ -0.33
CLK4-211ENST00000522556 OR4B1Q8NGF8 309 aa12.96□□□□□ -0.33
CLK4-211ENST00000522556 SMIM3Q9BZL3 60 aa12.96□□□□□ -0.33
CLK4-211ENST00000522556 SLC25A31Q9H0C2 315 aa12.96□□□□□ -0.33
CLK4-211ENST00000522556 HSPB11Q9Y547 144 aa12.95□□□□□ -0.34
CLK4-211ENST00000522556 RFNGQ9Y644 331 aa12.95□□□□□ -0.34
CLK4-211ENST00000522556 TENM2Q9NT68 2774 aa12.94□□□□□ -0.34
CLK4-211ENST00000522556 H3BQ15 152 aa12.94□□□□□ -0.34
CLK4-211ENST00000522556 RBMY1A1P0DJD3 496 aaKnown RBP12.94□□□□□ -0.34
CLK4-211ENST00000522556 RBMY1CP0DJD4 496 aa12.94□□□□□ -0.34
CLK4-211ENST00000522556 RAB31Q13636 194 aa12.94□□□□□ -0.34
CLK4-211ENST00000522556 RBMY1FQ15415 496 aaKnown RBP12.94□□□□□ -0.34
CLK4-211ENST00000522556 Q5BKY6 102 aa12.94□□□□□ -0.34
CLK4-211ENST00000522556 SPATA31B1PQ5VZV4 182 aa12.94□□□□□ -0.34
CLK4-211ENST00000522556 CHAC2Q8WUX2 184 aa12.94□□□□□ -0.34
CLK4-211ENST00000522556 WDR61Q9GZS3 305 aaKnown RBP12.94□□□□□ -0.34
CLK4-211ENST00000522556 WFDC1Q9HC57 220 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms