RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 TMEM14EPQ6UXP3 125 aa14.84□□□□□ -0.03
SDCBP-209ENST00000522243 ZBTB8BQ8NAP8 495 aaPredicted RBP14.84□□□□□ -0.03
SDCBP-209ENST00000522243 SLC25A39Q9BZJ4 359 aaPredicted RBP14.84□□□□□ -0.03
SDCBP-209ENST00000522243 SMIM9A6NGZ8 99 aa14.83□□□□□ -0.04
SDCBP-209ENST00000522243 PLA2G10O15496 165 aa14.83□□□□□ -0.04
SDCBP-209ENST00000522243 OR5G3P0C626 314 aa14.83□□□□□ -0.04
SDCBP-209ENST00000522243 LINC00869P0C866 280 aa14.83□□□□□ -0.04
SDCBP-209ENST00000522243 DLK1P80370 383 aa14.83□□□□□ -0.04
SDCBP-209ENST00000522243 C1orf158Q8N1D5 194 aa14.83□□□□□ -0.04
SDCBP-209ENST00000522243 GPR82Q96P67 336 aa14.83□□□□□ -0.04
SDCBP-209ENST00000522243 RNF126Q9BV68 326 aa14.83□□□□□ -0.04
SDCBP-209ENST00000522243 HIGD1AQ9Y241 93 aa14.83□□□□□ -0.04
SDCBP-209ENST00000522243 TRAV8-2A0A0B4J237 113 aa14.82□□□□□ -0.04
SDCBP-209ENST00000522243 CCSO14618 274 aa14.82□□□□□ -0.04
SDCBP-209ENST00000522243 SPART-AS1P0CW21 52 aa14.82□□□□□ -0.04
SDCBP-209ENST00000522243 S100A7P31151 101 aa14.82□□□□□ -0.04
SDCBP-209ENST00000522243 RNF182Q8N6D2 247 aa14.82□□□□□ -0.04
SDCBP-209ENST00000522243 OR10P1Q8NGE3 313 aa14.82□□□□□ -0.04
SDCBP-209ENST00000522243 MITD1Q8WV92 249 aa14.82□□□□□ -0.04
SDCBP-209ENST00000522243 UHRF2Q96PU4 802 aa14.82□□□□□ -0.04
SDCBP-209ENST00000522243 SHANK2-AS3Q9BTD1 123 aa14.82□□□□□ -0.04
SDCBP-209ENST00000522243 C20orf85Q9H1P6 137 aa14.82□□□□□ -0.04
SDCBP-209ENST00000522243 PLA2G2EQ9NZK7 142 aa14.82□□□□□ -0.04
SDCBP-209ENST00000522243 GOLT1BQ9Y3E0 138 aa14.82□□□□□ -0.04
SDCBP-209ENST00000522243 RFNGQ9Y644 331 aa14.82□□□□□ -0.04
SDCBP-209ENST00000522243 KMT2AQ03164 3969 aa14.81□□□□□ -0.04
SDCBP-209ENST00000522243 HYPMO75409 117 aa14.81□□□□□ -0.04
SDCBP-209ENST00000522243 NPVFQ9HCQ7 196 aa14.81□□□□□ -0.04
SDCBP-209ENST00000522243 RCL1Q9Y2P8 373 aaKnown RBP14.81□□□□□ -0.04
SDCBP-209ENST00000522243 TRAV6A0A075B6T7 132 aa14.8□□□□□ -0.04
SDCBP-209ENST00000522243 TMEM189A5PLL7 270 aa14.8□□□□□ -0.04
SDCBP-209ENST00000522243 LYRM1O43325 122 aa14.8□□□□□ -0.04
SDCBP-209ENST00000522243 MBPP02686 304 aaPredicted RBP14.8□□□□□ -0.04
SDCBP-209ENST00000522243 SLC38A11Q08AI6 406 aa14.8□□□□□ -0.04
SDCBP-209ENST00000522243 ARL16Q0P5N6 197 aa14.8□□□□□ -0.04
SDCBP-209ENST00000522243 AMTNQ6UX39 209 aa14.8□□□□□ -0.04
SDCBP-209ENST00000522243 ARL6Q9H0F7 186 aa14.8□□□□□ -0.04
SDCBP-209ENST00000522243 MGAT4CQ9UBM8 478 aa14.8□□□□□ -0.04
SDCBP-209ENST00000522243 TSC22D2O75157 780 aa14.79□□□□□ -0.04
SDCBP-209ENST00000522243 HBE1P02100 147 aa14.79□□□□□ -0.04
SDCBP-209ENST00000522243 AMBPP02760 352 aa14.79□□□□□ -0.04
SDCBP-209ENST00000522243 PRB4P10163 310 aaPredicted RBP14.79□□□□□ -0.04
SDCBP-209ENST00000522243 CNN1P51911 297 aaKnown RBP14.79□□□□□ -0.04
SDCBP-209ENST00000522243 PLP1P60201 277 aa14.79□□□□□ -0.04
SDCBP-209ENST00000522243 SELENOTP62341 195 aa14.79□□□□□ -0.04
SDCBP-209ENST00000522243 CNPY1Q3B7I2 92 aa14.79□□□□□ -0.04
SDCBP-209ENST00000522243 FAM222AQ5U5X8 452 aa14.79□□□□□ -0.04
SDCBP-209ENST00000522243 DKK2Q9UBU2 259 aa14.79□□□□□ -0.04
SDCBP-209ENST00000522243 C7orf66A4D0T2 115 aa14.78□□□□□ -0.04
SDCBP-209ENST00000522243 A8MTW9 85 aa14.78□□□□□ -0.04
SDCBP-209ENST00000522243 TCRBP04435 133 aa14.78□□□□□ -0.04
SDCBP-209ENST00000522243 RPL7P18124 248 aaKnown RBP14.78□□□□□ -0.04
SDCBP-209ENST00000522243 TAS2R30P59541 319 aa14.78□□□□□ -0.04
SDCBP-209ENST00000522243 SPINK13Q1W4C9 94 aa14.78□□□□□ -0.04
SDCBP-209ENST00000522243 TEPPQ6URK8 271 aa14.78□□□□□ -0.04
SDCBP-209ENST00000522243 PATE2Q6UY27 113 aa14.78□□□□□ -0.04
SDCBP-209ENST00000522243 ZNF738Q8NE65 137 aa14.78□□□□□ -0.04
SDCBP-209ENST00000522243 LOC102723971A0A1B0GUV8 181 aa14.77□□□□□ -0.05
SDCBP-209ENST00000522243 FAM25EA8MYX2 175 aa14.77□□□□□ -0.05
SDCBP-209ENST00000522243 FNDC10F2Z333 226 aa14.77□□□□□ -0.05
SDCBP-209ENST00000522243 M0R2Z0 102 aa14.77□□□□□ -0.05
SDCBP-209ENST00000522243 DUSP14O95147 198 aaKnown RBP14.77□□□□□ -0.05
SDCBP-209ENST00000522243 RRN3P1Q2M238 152 aa14.77□□□□□ -0.05
SDCBP-209ENST00000522243 OR11H7Q8NGC8 314 aa14.77□□□□□ -0.05
SDCBP-209ENST00000522243 IGF2BP2-AS1Q96M15 143 aa14.77□□□□□ -0.05
SDCBP-209ENST00000522243 SEC22CQ9BRL7 303 aa14.77□□□□□ -0.05
SDCBP-209ENST00000522243 NIPSNAP3BQ9BS92 247 aa14.77□□□□□ -0.05
SDCBP-209ENST00000522243 TMEM208Q9BTX3 173 aa14.77□□□□□ -0.05
SDCBP-209ENST00000522243 NDUFAF3Q9BU61 184 aa14.77□□□□□ -0.05
SDCBP-209ENST00000522243 ARV1Q9H2C2 271 aa14.77□□□□□ -0.05
SDCBP-209ENST00000522243 LSM5Q9Y4Y9 91 aaKnown RBP14.77□□□□□ -0.05
SDCBP-209ENST00000522243 YTHDF2Q9Y5A9 579 aaKnown RBP14.77□□□□□ -0.05
SDCBP-209ENST00000522243 L7N2F9 121 aa14.76□□□□□ -0.05
SDCBP-209ENST00000522243 PRM2P04554 102 aa14.76□□□□□ -0.05
SDCBP-209ENST00000522243 VAMP2P63027 116 aa14.76□□□□□ -0.05
SDCBP-209ENST00000522243 ZNF846Q147U1 533 aa14.76□□□□□ -0.05
SDCBP-209ENST00000522243 NDUFA13Q9P0J0 144 aa14.76□□□□□ -0.05
SDCBP-209ENST00000522243 GOSR2O14653 212 aa14.75□□□□□ -0.05
SDCBP-209ENST00000522243 AGPAT2O15120 278 aa14.75□□□□□ -0.05
SDCBP-209ENST00000522243 SNRPCP09234 159 aaKnown RBP14.75□□□□□ -0.05
SDCBP-209ENST00000522243 HTN3P15516 51 aa14.75□□□□□ -0.05
SDCBP-209ENST00000522243 LRRC20Q8TCA0 184 aa14.75□□□□□ -0.05
SDCBP-209ENST00000522243 NUDT15Q9NV35 164 aa14.75□□□□□ -0.05
SDCBP-209ENST00000522243 C5orf51A6NDU8 294 aa14.74□□□□□ -0.05
SDCBP-209ENST00000522243 ZNF705GA8MUZ8 300 aaPredicted RBP14.74□□□□□ -0.05
SDCBP-209ENST00000522243 K7EPK0 472 aa14.74□□□□□ -0.05
SDCBP-209ENST00000522243 CRXO43186 299 aaPredicted RBP14.74□□□□□ -0.05
SDCBP-209ENST00000522243 CXCL3P19876 107 aa14.74□□□□□ -0.05
SDCBP-209ENST00000522243 BCAP31P51572 246 aa14.74□□□□□ -0.05
SDCBP-209ENST00000522243 HIST1H1AQ02539 215 aaPredicted RBP14.74□□□□□ -0.05
SDCBP-209ENST00000522243 BAP18Q8IXM2 172 aa14.74□□□□□ -0.05
SDCBP-209ENST00000522243 ZNF431Q8TF32 576 aaPredicted RBP14.74□□□□□ -0.05
SDCBP-209ENST00000522243 VPS13DQ5THJ4 4388 aa14.73□□□□□ -0.05
SDCBP-209ENST00000522243 TRAV12-2A0A075B6T6 113 aa14.73□□□□□ -0.05
SDCBP-209ENST00000522243 A0A087X0K7 114 aa14.73□□□□□ -0.05
SDCBP-209ENST00000522243 MRPS12O15235 138 aaKnown RBP14.73□□□□□ -0.05
SDCBP-209ENST00000522243 PSG3Q16557 428 aa14.73□□□□□ -0.05
SDCBP-209ENST00000522243 LINC00305Q7Z4B0 112 aa14.73□□□□□ -0.05
SDCBP-209ENST00000522243 ZNF546Q86UE3 836 aa14.73□□□□□ -0.05
SDCBP-209ENST00000522243 MGST2Q99735 147 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms