RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 LY96Q9Y6Y9 160 aa8.89□□□□□ -0.99
SRGAP3-212ENST00000520860 IGKV1D-37A0A075B6S9 117 aa8.88□□□□□ -0.99
SRGAP3-212ENST00000520860 AQP4P55087 323 aa8.88□□□□□ -0.99
SRGAP3-212ENST00000520860 FGL1Q08830 312 aa8.88□□□□□ -0.99
SRGAP3-212ENST00000520860 UBE2NLQ5JXB2 153 aa8.88□□□□□ -0.99
SRGAP3-212ENST00000520860 OR1B1Q8NGR6 318 aa8.88□□□□□ -0.99
SRGAP3-212ENST00000520860 SLC35E1Q96K37 410 aa8.88□□□□□ -0.99
SRGAP3-212ENST00000520860 ICOSQ9Y6W8 199 aa8.88□□□□□ -0.99
SRGAP3-212ENST00000520860 TRAV8-2A0A0B4J237 113 aa8.87□□□□□ -0.99
SRGAP3-212ENST00000520860 K7EP13 123 aa8.87□□□□□ -0.99
SRGAP3-212ENST00000520860 TMEM127O75204 238 aa8.87□□□□□ -0.99
SRGAP3-212ENST00000520860 C1QBP02746 253 aa8.87□□□□□ -0.99
SRGAP3-212ENST00000520860 CDKN1BP46527 198 aa8.87□□□□□ -0.99
SRGAP3-212ENST00000520860 ARRDC1Q8N5I2 433 aa8.87□□□□□ -0.99
SRGAP3-212ENST00000520860 CCDC71LQ8N9Z2 235 aa8.87□□□□□ -0.99
SRGAP3-212ENST00000520860 OR8A1Q8NGG7 326 aa8.87□□□□□ -0.99
SRGAP3-212ENST00000520860 OR4D5Q8NGN0 318 aa8.87□□□□□ -0.99
SRGAP3-212ENST00000520860 GPX8Q8TED1 209 aa8.87□□□□□ -0.99
SRGAP3-212ENST00000520860 GPR82Q96P67 336 aa8.87□□□□□ -0.99
SRGAP3-212ENST00000520860 LINC00467Q9BRT7 94 aa8.87□□□□□ -0.99
SRGAP3-212ENST00000520860 TRGV2A0A075B6R0 118 aa8.86□□□□□ -0.99
SRGAP3-212ENST00000520860 LOC100506127A0A0U1RQW1 187 aa8.86□□□□□ -0.99
SRGAP3-212ENST00000520860 PSCAO43653 123 aa8.86□□□□□ -0.99
SRGAP3-212ENST00000520860 B3GALNT1O75752 331 aa8.86□□□□□ -0.99
SRGAP3-212ENST00000520860 OR5AC1P0C628 307 aa8.86□□□□□ -0.99
SRGAP3-212ENST00000520860 EVI2AP22794 236 aa8.86□□□□□ -0.99
SRGAP3-212ENST00000520860 SAMD12Q8N8I0 201 aa8.86□□□□□ -0.99
SRGAP3-212ENST00000520860 C20orf144Q9BQM9 153 aa8.86□□□□□ -0.99
SRGAP3-212ENST00000520860 CACFD1Q9UGQ2 172 aa8.86□□□□□ -0.99
SRGAP3-212ENST00000520860 SLC45A2Q9UMX9 530 aa8.86□□□□□ -0.99
SRGAP3-212ENST00000520860 U3KQ87 197 aa8.86□□□□□ -0.99
SRGAP3-212ENST00000520860 PAX4O43316 350 aa8.85□□□□□ -0.99
SRGAP3-212ENST00000520860 S100A7P31151 101 aa8.85□□□□□ -0.99
SRGAP3-212ENST00000520860 GPX4P36969 197 aaPredicted RBP8.85□□□□□ -0.99
SRGAP3-212ENST00000520860 Q6ZTI0 123 aa8.85□□□□□ -0.99
SRGAP3-212ENST00000520860 LGI3Q8N145 548 aa8.85□□□□□ -0.99
SRGAP3-212ENST00000520860 TRGV9Q99603 122 aa8.85□□□□□ -0.99
SRGAP3-212ENST00000520860 CFDP00746 253 aaPredicted RBP8.84□□□□□ -0.99
SRGAP3-212ENST00000520860 PSG3Q16557 428 aa8.84□□□□□ -0.99
SRGAP3-212ENST00000520860 GGNBP1Q5YKI7 109 aa8.84□□□□□ -0.99
SRGAP3-212ENST00000520860 ZFAND1Q8TCF1 268 aa8.84□□□□□ -0.99
SRGAP3-212ENST00000520860 RBPMSQ93062 196 aaKnown RBP8.84□□□□□ -0.99
SRGAP3-212ENST00000520860 TMEM222Q9H0R3 208 aa8.84□□□□□ -0.99
SRGAP3-212ENST00000520860 LRP1Q07954 4544 aaKnown RBP8.83□□□□□ -1
SRGAP3-212ENST00000520860 CDS2O95674 445 aa8.83□□□□□ -1
SRGAP3-212ENST00000520860 DAZ2Q13117 558 aaKnown RBP8.83□□□□□ -1
SRGAP3-212ENST00000520860 MEF2DQ14814 521 aa8.83□□□□□ -1
SRGAP3-212ENST00000520860 RNASE10Q5GAN6 216 aaKnown RBP8.83□□□□□ -1
SRGAP3-212ENST00000520860 LYPD5Q6UWN5 251 aa8.83□□□□□ -1
SRGAP3-212ENST00000520860 LHFPL1Q86WI0 220 aa8.83□□□□□ -1
SRGAP3-212ENST00000520860 C10orf126Q8N4M7 172 aa8.83□□□□□ -1
SRGAP3-212ENST00000520860 Q8N814 137 aa8.83□□□□□ -1
SRGAP3-212ENST00000520860 DTD1Q8TEA8 209 aa8.83□□□□□ -1
SRGAP3-212ENST00000520860 TMEM147Q9BVK8 224 aa8.83□□□□□ -1
SRGAP3-212ENST00000520860 TMEM56-RWDD3S4R434 201 aa8.83□□□□□ -1
SRGAP3-212ENST00000520860 LRCOL1A6NCL2 159 aa8.82□□□□□ -1
SRGAP3-212ENST00000520860 ZNF324O75467 553 aaPredicted RBP8.82□□□□□ -1
SRGAP3-212ENST00000520860 TNFAIP8O95379 198 aa8.82□□□□□ -1
SRGAP3-212ENST00000520860 ORM2P19652 201 aa8.82□□□□□ -1
SRGAP3-212ENST00000520860 SNX29P2Q8IUI4 249 aa8.82□□□□□ -1
SRGAP3-212ENST00000520860 CROCCP3Q8IVE0 287 aa8.82□□□□□ -1
SRGAP3-212ENST00000520860 LHFPL5Q8TAF8 219 aa8.82□□□□□ -1
SRGAP3-212ENST00000520860 LRRC20Q8TCA0 184 aa8.82□□□□□ -1
SRGAP3-212ENST00000520860 CNBD2Q96M20 576 aa8.82□□□□□ -1
SRGAP3-212ENST00000520860 TEX13DA0A0J9YY54 714 aaPredicted RBP8.81□□□□□ -1
SRGAP3-212ENST00000520860 SMIM31A0A1B0GVY4 71 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 CRYGDP07320 174 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 SULT1A3P0DMM9 295 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 SULT1A4P0DMN0 295 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 CXCL3P19876 107 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 ATP5IP56385 69 aaPredicted RBP8.81□□□□□ -1
SRGAP3-212ENST00000520860 GABARAPL2P60520 117 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 KIR3DS1Q14943 382 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 MRPL23Q16540 153 aaKnown RBP8.81□□□□□ -1
SRGAP3-212ENST00000520860 GPR107Q5VW38 600 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 TMEM268Q5VZI3 342 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 Q6ZSA8 131 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 NEGR1Q7Z3B1 354 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 WFDC10BQ8IUB3 73 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 SELENOHQ8IZQ5 122 aaKnown RBP8.81□□□□□ -1
SRGAP3-212ENST00000520860 BPIFCQ8NFQ6 507 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 OR13C8Q8NGS7 320 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 GLYATL2Q8WU03 294 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 RPUSD4Q96CM3 377 aaKnown RBP8.81□□□□□ -1
SRGAP3-212ENST00000520860 FUT9Q9Y231 359 aa8.81□□□□□ -1
SRGAP3-212ENST00000520860 TRGV1A0A0A0MS02 117 aa8.8□□□□□ -1
SRGAP3-212ENST00000520860 PRB4P10163 310 aaPredicted RBP8.8□□□□□ -1
SRGAP3-212ENST00000520860 RPL7P18124 248 aaKnown RBP8.8□□□□□ -1
SRGAP3-212ENST00000520860 GFI1BQ5VTD9 330 aa8.8□□□□□ -1
SRGAP3-212ENST00000520860 CCDC190Q86UF4 302 aa8.8□□□□□ -1
SRGAP3-212ENST00000520860 THAP8Q8NA92 274 aa8.8□□□□□ -1
SRGAP3-212ENST00000520860 Q9H521 79 aa8.8□□□□□ -1
SRGAP3-212ENST00000520860 IGKV1OR2-108A0A075B7D4 117 aa8.79□□□□□ -1
SRGAP3-212ENST00000520860 STEAP1BQ6NZ63 245 aa8.79□□□□□ -1
SRGAP3-212ENST00000520860 TERB2Q8NHR7 220 aa8.79□□□□□ -1
SRGAP3-212ENST00000520860 PARD6GQ9BYG4 376 aaPredicted RBP8.79□□□□□ -1
SRGAP3-212ENST00000520860 RBKSQ9H477 322 aa8.79□□□□□ -1
SRGAP3-212ENST00000520860 HSPB7Q9UBY9 170 aa8.79□□□□□ -1
SRGAP3-212ENST00000520860 PRO0255Q9UI72 69 aa8.79□□□□□ -1
SRGAP3-212ENST00000520860 TRAV5A0A0B4J249 113 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms