RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 THAP6Q8TBB0 222 aa16.24■□□□□ 0.19
VEGFA-217ENST00000518538 RNF24Q9Y225 148 aa16.24■□□□□ 0.19
VEGFA-217ENST00000518538 ELOA3CA0A087WX78 387 aaPredicted RBP16.23■□□□□ 0.19
VEGFA-217ENST00000518538 COX7A2P2O60397 106 aa16.23■□□□□ 0.19
VEGFA-217ENST00000518538 PSMG4Q5JS54 123 aa16.23■□□□□ 0.19
VEGFA-217ENST00000518538 Q6ZRG5 221 aa16.23■□□□□ 0.19
VEGFA-217ENST00000518538 UBE2CO00762 179 aa16.22■□□□□ 0.19
VEGFA-217ENST00000518538 SOCS3O14543 225 aa16.22■□□□□ 0.19
VEGFA-217ENST00000518538 RPL7P18124 248 aaKnown RBP16.22■□□□□ 0.19
VEGFA-217ENST00000518538 ID1P41134 155 aa16.22■□□□□ 0.19
VEGFA-217ENST00000518538 MEOX2P50222 304 aa16.22■□□□□ 0.19
VEGFA-217ENST00000518538 FGL1Q08830 312 aa16.22■□□□□ 0.19
VEGFA-217ENST00000518538 SAMD13Q5VXD3 122 aa16.22■□□□□ 0.19
VEGFA-217ENST00000518538 NPCDR1Q9BY65 106 aa16.22■□□□□ 0.19
VEGFA-217ENST00000518538 RETNQ9HD89 108 aa16.22■□□□□ 0.19
VEGFA-217ENST00000518538 SLC39A9Q9NUM3 307 aa16.22■□□□□ 0.19
VEGFA-217ENST00000518538 PSMB3P49720 205 aa16.21■□□□□ 0.19
VEGFA-217ENST00000518538 B2MP61769 119 aa16.21■□□□□ 0.19
VEGFA-217ENST00000518538 C10orf113Q5VZT2 155 aa16.21■□□□□ 0.19
VEGFA-217ENST00000518538 LINC00305Q7Z4B0 112 aa16.21■□□□□ 0.19
VEGFA-217ENST00000518538 OR1L4Q8NGR5 311 aa16.21■□□□□ 0.19
VEGFA-217ENST00000518538 TMEM37Q8WXS4 190 aa16.21■□□□□ 0.19
VEGFA-217ENST00000518538 ATP5SQ99766 215 aa16.21■□□□□ 0.19
VEGFA-217ENST00000518538 RSG1Q9BU20 258 aa16.21■□□□□ 0.19
VEGFA-217ENST00000518538 PXMP4Q9Y6I8 212 aa16.21■□□□□ 0.19
VEGFA-217ENST00000518538 STHQ8IWL8 128 aa16.2■□□□□ 0.18
VEGFA-217ENST00000518538 C17orf77Q96MU5 243 aa16.2■□□□□ 0.18
VEGFA-217ENST00000518538 WWC2-AS2Q96NR7 200 aa16.2■□□□□ 0.18
VEGFA-217ENST00000518538 PFDN5Q99471 154 aa16.2■□□□□ 0.18
VEGFA-217ENST00000518538 WDR61Q9GZS3 305 aaKnown RBP16.2■□□□□ 0.18
VEGFA-217ENST00000518538 DNAJC4Q9NNZ3 241 aa16.2■□□□□ 0.18
VEGFA-217ENST00000518538 KNCNA6PVL3 124 aa16.19■□□□□ 0.18
VEGFA-217ENST00000518538 ISLRO14498 428 aa16.19■□□□□ 0.18
VEGFA-217ENST00000518538 Q6ZWC4 215 aa16.19■□□□□ 0.18
VEGFA-217ENST00000518538 CSTL1Q9H114 145 aa16.19■□□□□ 0.18
VEGFA-217ENST00000518538 ATF4P18848 351 aaPredicted RBP16.18■□□□□ 0.18
VEGFA-217ENST00000518538 ACTL10Q5JWF8 245 aa16.18■□□□□ 0.18
VEGFA-217ENST00000518538 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.18■□□□□ 0.18
VEGFA-217ENST00000518538 TRPT1Q86TN4 253 aaKnown RBP16.18■□□□□ 0.18
VEGFA-217ENST00000518538 SMIM3Q9BZL3 60 aa16.18■□□□□ 0.18
VEGFA-217ENST00000518538 KCNIP2Q9NS61 270 aa16.18■□□□□ 0.18
VEGFA-217ENST00000518538 Q5BKY6 102 aa16.17■□□□□ 0.18
VEGFA-217ENST00000518538 MORN5Q5VZ52 161 aa16.17■□□□□ 0.18
VEGFA-217ENST00000518538 C16orf92Q96LL3 132 aa16.17■□□□□ 0.18
VEGFA-217ENST00000518538 LINC00052Q96N35 136 aa16.17■□□□□ 0.18
VEGFA-217ENST00000518538 TP53TG1Q9Y2A0 90 aa16.17■□□□□ 0.18
VEGFA-217ENST00000518538 A0A087X0K7 114 aa16.16■□□□□ 0.18
VEGFA-217ENST00000518538 MRPS12O15235 138 aaKnown RBP16.16■□□□□ 0.18
VEGFA-217ENST00000518538 IFNA5P01569 189 aa16.16■□□□□ 0.18
VEGFA-217ENST00000518538 ZNF709Q8N972 641 aa16.16■□□□□ 0.18
VEGFA-217ENST00000518538 GATAD1Q8WUU5 269 aa16.16■□□□□ 0.18
VEGFA-217ENST00000518538 OVOL2Q9BRP0 275 aa16.16■□□□□ 0.18
VEGFA-217ENST00000518538 HUWE1Q7Z6Z7 4374 aaKnown RBP16.15■□□□□ 0.18
VEGFA-217ENST00000518538 C17orf112F2Z3M2 114 aa16.15■□□□□ 0.18
VEGFA-217ENST00000518538 DEFB135Q30KP9 77 aa16.15■□□□□ 0.18
VEGFA-217ENST00000518538 BPIFA4PQ86YQ2 179 aa16.15■□□□□ 0.18
VEGFA-217ENST00000518538 OR2T35Q8NGX2 323 aa16.15■□□□□ 0.18
VEGFA-217ENST00000518538 AQP10Q96PS8 301 aa16.15■□□□□ 0.18
VEGFA-217ENST00000518538 SPRY2O43597 315 aa16.14■□□□□ 0.17
VEGFA-217ENST00000518538 SPP1P10451 314 aa16.14■□□□□ 0.17
VEGFA-217ENST00000518538 SCGB1C1Q8TD33 95 aa16.14■□□□□ 0.17
VEGFA-217ENST00000518538 PARD6GQ9BYG4 376 aaPredicted RBP16.14■□□□□ 0.17
VEGFA-217ENST00000518538 WFDC1Q9HC57 220 aa16.14■□□□□ 0.17
VEGFA-217ENST00000518538 H3BMM0 161 aa16.13■□□□□ 0.17
VEGFA-217ENST00000518538 CA1P00915 261 aaPredicted RBP16.13■□□□□ 0.17
VEGFA-217ENST00000518538 HLA-DRB4P13762 266 aa16.13■□□□□ 0.17
VEGFA-217ENST00000518538 MORN3Q6PF18 240 aaPredicted RBP16.13■□□□□ 0.17
VEGFA-217ENST00000518538 FOXI2Q6ZQN5 318 aa16.13■□□□□ 0.17
VEGFA-217ENST00000518538 RNF183Q96D59 192 aa16.13■□□□□ 0.17
VEGFA-217ENST00000518538 C20orf173Q96LM9 149 aa16.13■□□□□ 0.17
VEGFA-217ENST00000518538 SAV1Q9H4B6 383 aaPredicted RBP16.13■□□□□ 0.17
VEGFA-217ENST00000518538 RPRMQ9NS64 109 aa16.13■□□□□ 0.17
VEGFA-217ENST00000518538 HLA-DRB4X5D2U9 266 aa16.13■□□□□ 0.17
VEGFA-217ENST00000518538 TRAV8-2A0A0B4J237 113 aa16.12■□□□□ 0.17
VEGFA-217ENST00000518538 CXCL2P19875 107 aa16.12■□□□□ 0.17
VEGFA-217ENST00000518538 GCSAMLQ5JQS6 135 aa16.12■□□□□ 0.17
VEGFA-217ENST00000518538 EDA2RQ9HAV5 297 aa16.12■□□□□ 0.17
VEGFA-217ENST00000518538 TRAV5A0A0B4J249 113 aa16.11■□□□□ 0.17
VEGFA-217ENST00000518538 TMEM41BQ5BJD5 291 aa16.11■□□□□ 0.17
VEGFA-217ENST00000518538 GDF5OSQ5U4N7 250 aa16.11■□□□□ 0.17
VEGFA-217ENST00000518538 SPATA31B1PQ5VZV4 182 aa16.11■□□□□ 0.17
VEGFA-217ENST00000518538 TENM3Q9P273 2699 aa16.11■□□□□ 0.17
VEGFA-217ENST00000518538 FXYD6-FXYD2A0A087WZ82 144 aa16.1■□□□□ 0.17
VEGFA-217ENST00000518538 IGLC2P0DOY2 106 aa16.1■□□□□ 0.17
VEGFA-217ENST00000518538 DEFB1P60022 68 aa16.1■□□□□ 0.17
VEGFA-217ENST00000518538 LCN15Q6UWW0 184 aa16.1■□□□□ 0.17
VEGFA-217ENST00000518538 INO80EQ8NBZ0 244 aaPredicted RBP16.1■□□□□ 0.17
VEGFA-217ENST00000518538 HRH4Q9H3N8 390 aa16.1■□□□□ 0.17
VEGFA-217ENST00000518538 G3V3Q6 166 aa16.09■□□□□ 0.17
VEGFA-217ENST00000518538 GIG44P09565 113 aaPredicted RBP16.09■□□□□ 0.17
VEGFA-217ENST00000518538 ZNF266Q14584 549 aa16.09■□□□□ 0.17
VEGFA-217ENST00000518538 FAM78BQ5VT40 261 aa16.09■□□□□ 0.17
VEGFA-217ENST00000518538 IGFL4Q6B9Z1 124 aa16.09■□□□□ 0.17
VEGFA-217ENST00000518538 EBLN2Q6P2I7 272 aa16.09■□□□□ 0.17
VEGFA-217ENST00000518538 RNF182Q8N6D2 247 aa16.09■□□□□ 0.17
VEGFA-217ENST00000518538 LRRC20Q8TCA0 184 aa16.09■□□□□ 0.17
VEGFA-217ENST00000518538 CLUHP3Q96NS8 147 aa16.09■□□□□ 0.17
VEGFA-217ENST00000518538 SLC50A1Q9BRV3 221 aa16.09■□□□□ 0.17
VEGFA-217ENST00000518538 TNFSF18Q9UNG2 199 aa16.09■□□□□ 0.17
VEGFA-217ENST00000518538 AGRNO00468 2067 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms