RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 GPN1Q9HCN4 374 aaPredicted RBP10.24□□□□□ -0.77
PDGFRB-202ENST00000517488 IGSF23A1L1A6 192 aa10.23□□□□□ -0.77
PDGFRB-202ENST00000517488 F6UB75 175 aa10.23□□□□□ -0.77
PDGFRB-202ENST00000517488 AGPAT2O15120 278 aa10.23□□□□□ -0.77
PDGFRB-202ENST00000517488 IGKV3-20P01619 116 aa10.23□□□□□ -0.77
PDGFRB-202ENST00000517488 PVALBP20472 110 aaPredicted RBP10.23□□□□□ -0.77
PDGFRB-202ENST00000517488 S100A7P31151 101 aa10.23□□□□□ -0.77
PDGFRB-202ENST00000517488 FOXI2Q6ZQN5 318 aa10.23□□□□□ -0.77
PDGFRB-202ENST00000517488 Q8NAQ8 132 aa10.23□□□□□ -0.77
PDGFRB-202ENST00000517488 C16orf92Q96LL3 132 aa10.23□□□□□ -0.77
PDGFRB-202ENST00000517488 GPR82Q96P67 336 aa10.23□□□□□ -0.77
PDGFRB-202ENST00000517488 MGST2Q99735 147 aa10.23□□□□□ -0.77
PDGFRB-202ENST00000517488 MARVELD1Q9BSK0 173 aa10.23□□□□□ -0.77
PDGFRB-202ENST00000517488 SAV1Q9H4B6 383 aaPredicted RBP10.23□□□□□ -0.77
PDGFRB-202ENST00000517488 LYRM2Q9NU23 88 aaPredicted RBP10.23□□□□□ -0.77
PDGFRB-202ENST00000517488 XCL2Q9UBD3 114 aa10.23□□□□□ -0.77
PDGFRB-202ENST00000517488 ZNF705EA8MWA4 302 aaPredicted RBP10.22□□□□□ -0.77
PDGFRB-202ENST00000517488 GOSR2O14653 212 aa10.22□□□□□ -0.77
PDGFRB-202ENST00000517488 PRAF2O60831 178 aa10.22□□□□□ -0.77
PDGFRB-202ENST00000517488 RBMY1A1P0DJD3 496 aaKnown RBP10.22□□□□□ -0.77
PDGFRB-202ENST00000517488 RBMY1CP0DJD4 496 aa10.22□□□□□ -0.77
PDGFRB-202ENST00000517488 MEOX2P50222 304 aa10.22□□□□□ -0.77
PDGFRB-202ENST00000517488 NANOS2P60321 138 aaKnown RBP10.22□□□□□ -0.77
PDGFRB-202ENST00000517488 RBMY1FQ15415 496 aaKnown RBP10.22□□□□□ -0.77
PDGFRB-202ENST00000517488 SAMD13Q5VXD3 122 aa10.22□□□□□ -0.77
PDGFRB-202ENST00000517488 IGFL4Q6B9Z1 124 aa10.22□□□□□ -0.77
PDGFRB-202ENST00000517488 CEMP1Q6PRD7 247 aaPredicted RBP10.22□□□□□ -0.77
PDGFRB-202ENST00000517488 ZNF546Q86UE3 836 aa10.22□□□□□ -0.77
PDGFRB-202ENST00000517488 TMEM252Q8N6L7 170 aa10.22□□□□□ -0.77
PDGFRB-202ENST00000517488 ARV1Q9H2C2 271 aa10.22□□□□□ -0.77
PDGFRB-202ENST00000517488 X6R8D5 127 aa10.22□□□□□ -0.77
PDGFRB-202ENST00000517488 TRAV8-2A0A0B4J237 113 aa10.21□□□□□ -0.77
PDGFRB-202ENST00000517488 IGHV4-28A0A0C4DH34 117 aa10.21□□□□□ -0.77
PDGFRB-202ENST00000517488 RPL7P18124 248 aaKnown RBP10.21□□□□□ -0.77
PDGFRB-202ENST00000517488 SULT1A1P50225 295 aa10.21□□□□□ -0.77
PDGFRB-202ENST00000517488 FXYD7P58549 80 aa10.21□□□□□ -0.77
PDGFRB-202ENST00000517488 DEFA1P59665 94 aa10.21□□□□□ -0.77
PDGFRB-202ENST00000517488 DEFA3P59666 94 aa10.21□□□□□ -0.77
PDGFRB-202ENST00000517488 NUTF2P61970 127 aaKnown RBP10.21□□□□□ -0.77
PDGFRB-202ENST00000517488 FGL1Q08830 312 aa10.21□□□□□ -0.77
PDGFRB-202ENST00000517488 C11orf45Q8TAV5 145 aa10.21□□□□□ -0.77
PDGFRB-202ENST00000517488 UQCC1Q9NVA1 299 aa10.21□□□□□ -0.77
PDGFRB-202ENST00000517488 WDR83OSQ9Y284 106 aa10.21□□□□□ -0.77
PDGFRB-202ENST00000517488 VPS13DQ5THJ4 4388 aa10.21□□□□□ -0.78
PDGFRB-202ENST00000517488 A0A0J9YX75 114 aa10.2□□□□□ -0.78
PDGFRB-202ENST00000517488 NUPR2A6NF83 97 aa10.2□□□□□ -0.78
PDGFRB-202ENST00000517488 CAMLGP49069 296 aa10.2□□□□□ -0.78
PDGFRB-202ENST00000517488 VWC2Q2TAL6 325 aa10.2□□□□□ -0.78
PDGFRB-202ENST00000517488 PXDC1Q5TGL8 231 aa10.2□□□□□ -0.78
PDGFRB-202ENST00000517488 FAM78BQ5VT40 261 aa10.2□□□□□ -0.78
PDGFRB-202ENST00000517488 EBLN2Q6P2I7 272 aa10.2□□□□□ -0.78
PDGFRB-202ENST00000517488 RNF182Q8N6D2 247 aa10.2□□□□□ -0.78
PDGFRB-202ENST00000517488 ZNF709Q8N972 641 aa10.2□□□□□ -0.78
PDGFRB-202ENST00000517488 OR4B1Q8NGF8 309 aa10.2□□□□□ -0.78
PDGFRB-202ENST00000517488 PHLDA1Q8WV24 401 aaPredicted RBP10.2□□□□□ -0.78
PDGFRB-202ENST00000517488 TMEM37Q8WXS4 190 aa10.2□□□□□ -0.78
PDGFRB-202ENST00000517488 RPRMQ9NS64 109 aa10.2□□□□□ -0.78
PDGFRB-202ENST00000517488 ELOA3CA0A087WX78 387 aaPredicted RBP10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 H0YIZ8 118 aa10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 MRPS12O15235 138 aaKnown RBP10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 JTBO76095 146 aa10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 MIFP14174 115 aa10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 S100A11P31949 105 aa10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 MORN5Q5VZ52 161 aa10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 SPATA31B1PQ5VZV4 182 aa10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 MIC13Q5XKP0 118 aa10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 LINC00305Q7Z4B0 112 aa10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 STX12Q86Y82 276 aa10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 CLUHP3Q96NS8 147 aa10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 C1QTNF4Q9BXJ3 329 aa10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 NMES1Q9C002 83 aa10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 SLC35B3Q9H1N7 401 aa10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 OR5AC2Q9NZP5 309 aa10.19□□□□□ -0.78
PDGFRB-202ENST00000517488 A0A087X0K7 114 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 UBE2L5PA0A1B0GUS4 154 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 COX7A2P2O60397 106 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 SNRPCP09234 159 aaKnown RBP10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 HLA-DMBP28068 263 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 H2BFSP57053 126 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 HBG1P69891 147 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 HBG2P69892 147 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 PRR20EP86478 221 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 PRR20CP86479 221 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 PRR20DP86480 221 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 PRR20BP86481 221 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 PRR20AP86496 221 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 PSG9Q00887 426 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 RAB31Q13636 194 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 LRRC37A5PQ49AS3 106 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 S100A7AQ86SG5 101 aa10.18□□□□□ -0.78
PDGFRB-202ENST00000517488 KMT2AQ03164 3969 aa10.17□□□□□ -0.78
PDGFRB-202ENST00000517488 RLN2P04090 185 aa10.17□□□□□ -0.78
PDGFRB-202ENST00000517488 ZNF705DP0CH99 300 aaPredicted RBP10.17□□□□□ -0.78
PDGFRB-202ENST00000517488 ZNF705BP0CI00 300 aaPredicted RBP10.17□□□□□ -0.78
PDGFRB-202ENST00000517488 PRB4P10163 310 aaPredicted RBP10.17□□□□□ -0.78
PDGFRB-202ENST00000517488 NHLH2Q02577 135 aa10.17□□□□□ -0.78
PDGFRB-202ENST00000517488 BAXQ07812 192 aa10.17□□□□□ -0.78
PDGFRB-202ENST00000517488 C10orf113Q5VZT2 155 aa10.17□□□□□ -0.78
PDGFRB-202ENST00000517488 ZNF705AQ6ZN79 300 aaPredicted RBP10.17□□□□□ -0.78
PDGFRB-202ENST00000517488 MFFQ9GZY8 342 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms