RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 TMEM88Q6PEY1 159 aa10.35□□□□□ -0.75
SCARNA20.5-201ENST00000516991 GSG1LQ6UXU4 331 aa10.35□□□□□ -0.75
SCARNA20.5-201ENST00000516991 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.35□□□□□ -0.75
SCARNA20.5-201ENST00000516991 MCFD2Q8NI22 146 aa10.35□□□□□ -0.75
SCARNA20.5-201ENST00000516991 TRIM63Q969Q1 353 aa10.35□□□□□ -0.75
SCARNA20.5-201ENST00000516991 WRBO00258 174 aa10.34□□□□□ -0.75
SCARNA20.5-201ENST00000516991 ORM2P19652 201 aa10.34□□□□□ -0.75
SCARNA20.5-201ENST00000516991 TSPOP30536 169 aa10.34□□□□□ -0.75
SCARNA20.5-201ENST00000516991 CNN1P51911 297 aaKnown RBP10.34□□□□□ -0.75
SCARNA20.5-201ENST00000516991 C1orf134Q5TEV5 83 aa10.34□□□□□ -0.75
SCARNA20.5-201ENST00000516991 TOMM5Q8N4H5 51 aa10.34□□□□□ -0.75
SCARNA20.5-201ENST00000516991 STRAPQ9Y3F4 350 aaKnown RBP10.34□□□□□ -0.75
SCARNA20.5-201ENST00000516991 SFT2D2O95562 160 aa10.33□□□□□ -0.76
SCARNA20.5-201ENST00000516991 PYDC2Q56P42 97 aa10.33□□□□□ -0.76
SCARNA20.5-201ENST00000516991 SPANXN5Q5MJ07 72 aa10.33□□□□□ -0.76
SCARNA20.5-201ENST00000516991 ACOT7LQ6ZUV0 252 aa10.33□□□□□ -0.76
SCARNA20.5-201ENST00000516991 S100A7AQ86SG5 101 aa10.33□□□□□ -0.76
SCARNA20.5-201ENST00000516991 OR11H7Q8NGC8 314 aa10.33□□□□□ -0.76
SCARNA20.5-201ENST00000516991 PLA2G2EQ9NZK7 142 aa10.33□□□□□ -0.76
SCARNA20.5-201ENST00000516991 H3BMQ9 156 aa10.32□□□□□ -0.76
SCARNA20.5-201ENST00000516991 H3BRN7 92 aa10.32□□□□□ -0.76
SCARNA20.5-201ENST00000516991 BOLA2-SMG1P6H3BVE0 249 aa10.32□□□□□ -0.76
SCARNA20.5-201ENST00000516991 M0R2Z0 102 aa10.32□□□□□ -0.76
SCARNA20.5-201ENST00000516991 RPL7P18124 248 aaKnown RBP10.32□□□□□ -0.76
SCARNA20.5-201ENST00000516991 UBE2MP61081 183 aaKnown RBP10.32□□□□□ -0.76
SCARNA20.5-201ENST00000516991 RAP2BP61225 183 aa10.32□□□□□ -0.76
SCARNA20.5-201ENST00000516991 PPP1R1AQ13522 171 aa10.32□□□□□ -0.76
SCARNA20.5-201ENST00000516991 SPINK13Q1W4C9 94 aa10.32□□□□□ -0.76
SCARNA20.5-201ENST00000516991 TMEM144Q7Z5S9 345 aa10.32□□□□□ -0.76
SCARNA20.5-201ENST00000516991 ZNF738Q8NE65 137 aa10.32□□□□□ -0.76
SCARNA20.5-201ENST00000516991 C17orf77Q96MU5 243 aa10.32□□□□□ -0.76
SCARNA20.5-201ENST00000516991 ATG101Q9BSB4 218 aa10.32□□□□□ -0.76
SCARNA20.5-201ENST00000516991 DNAH11Q96DT5 4516 aa10.31□□□□□ -0.76
SCARNA20.5-201ENST00000516991 H3BP45 60 aa10.31□□□□□ -0.76
SCARNA20.5-201ENST00000516991 HOXB5P09067 269 aa10.31□□□□□ -0.76
SCARNA20.5-201ENST00000516991 GATA2P23769 480 aaPredicted RBP10.31□□□□□ -0.76
SCARNA20.5-201ENST00000516991 SELENOTP62341 195 aa10.31□□□□□ -0.76
SCARNA20.5-201ENST00000516991 CYP2G1PQ6ZSU1 146 aa10.31□□□□□ -0.76
SCARNA20.5-201ENST00000516991 TMEM256Q8N2U0 113 aa10.31□□□□□ -0.76
SCARNA20.5-201ENST00000516991 SHANK2-AS3Q9BTD1 123 aa10.31□□□□□ -0.76
SCARNA20.5-201ENST00000516991 SLC25A39Q9BZJ4 359 aaPredicted RBP10.31□□□□□ -0.76
SCARNA20.5-201ENST00000516991 RNF24Q9Y225 148 aa10.31□□□□□ -0.76
SCARNA20.5-201ENST00000516991 HIGD1AQ9Y241 93 aa10.31□□□□□ -0.76
SCARNA20.5-201ENST00000516991 TRAV8-2A0A0B4J237 113 aa10.3□□□□□ -0.76
SCARNA20.5-201ENST00000516991 SMCO3A2RU48 225 aa10.3□□□□□ -0.76
SCARNA20.5-201ENST00000516991 ZNF705GA8MUZ8 300 aaPredicted RBP10.3□□□□□ -0.76
SCARNA20.5-201ENST00000516991 CRXO43186 299 aaPredicted RBP10.3□□□□□ -0.76
SCARNA20.5-201ENST00000516991 IL5P05113 134 aa10.3□□□□□ -0.76
SCARNA20.5-201ENST00000516991 FGL1Q08830 312 aa10.3□□□□□ -0.76
SCARNA20.5-201ENST00000516991 A0A087X0K7 114 aa10.29□□□□□ -0.76
SCARNA20.5-201ENST00000516991 HYPMO75409 117 aa10.29□□□□□ -0.76
SCARNA20.5-201ENST00000516991 LINC00869P0C866 280 aa10.29□□□□□ -0.76
SCARNA20.5-201ENST00000516991 PLP1P60201 277 aa10.29□□□□□ -0.76
SCARNA20.5-201ENST00000516991 TMEM182Q6ZP80 229 aaPredicted RBP10.29□□□□□ -0.76
SCARNA20.5-201ENST00000516991 BAP18Q8IXM2 172 aa10.29□□□□□ -0.76
SCARNA20.5-201ENST00000516991 RNF182Q8N6D2 247 aa10.29□□□□□ -0.76
SCARNA20.5-201ENST00000516991 V9GYH0 126 aa10.29□□□□□ -0.76
SCARNA20.5-201ENST00000516991 DYNC1H1Q14204 4646 aaKnown RBP10.29□□□□□ -0.76
SCARNA20.5-201ENST00000516991 FNDC10F2Z333 226 aa10.28□□□□□ -0.76
SCARNA20.5-201ENST00000516991 ATP5G1P05496 136 aa10.28□□□□□ -0.76
SCARNA20.5-201ENST00000516991 DEFB130BP0DP73 79 aa10.28□□□□□ -0.76
SCARNA20.5-201ENST00000516991 DEFB130AP0DP74 79 aa10.28□□□□□ -0.76
SCARNA20.5-201ENST00000516991 S100A5P33763 92 aa10.28□□□□□ -0.76
SCARNA20.5-201ENST00000516991 ATP5G3P48201 142 aa10.28□□□□□ -0.76
SCARNA20.5-201ENST00000516991 RHOBP62745 196 aa10.28□□□□□ -0.76
SCARNA20.5-201ENST00000516991 ID3Q02535 119 aa10.28□□□□□ -0.76
SCARNA20.5-201ENST00000516991 HIST1H1AQ02539 215 aaPredicted RBP10.28□□□□□ -0.76
SCARNA20.5-201ENST00000516991 IGFL4Q6B9Z1 124 aa10.28□□□□□ -0.76
SCARNA20.5-201ENST00000516991 ZNF575Q86XF7 245 aa10.28□□□□□ -0.76
SCARNA20.5-201ENST00000516991 OR8A1Q8NGG7 326 aa10.28□□□□□ -0.76
SCARNA20.5-201ENST00000516991 C16orf74Q96GX8 76 aa10.28□□□□□ -0.76
SCARNA20.5-201ENST00000516991 PPP1R14DQ9NXH3 145 aa10.28□□□□□ -0.76
SCARNA20.5-201ENST00000516991 PKD1P98161 4303 aa10.27□□□□□ -0.77
SCARNA20.5-201ENST00000516991 F5H768 121 aa10.27□□□□□ -0.77
SCARNA20.5-201ENST00000516991 OR5G3P0C626 314 aa10.27□□□□□ -0.77
SCARNA20.5-201ENST00000516991 CXCL2P19875 107 aa10.27□□□□□ -0.77
SCARNA20.5-201ENST00000516991 CXCL3P19876 107 aa10.27□□□□□ -0.77
SCARNA20.5-201ENST00000516991 TAS2R60P59551 318 aa10.27□□□□□ -0.77
SCARNA20.5-201ENST00000516991 DLK1P80370 383 aa10.27□□□□□ -0.77
SCARNA20.5-201ENST00000516991 LRRC20Q8TCA0 184 aa10.27□□□□□ -0.77
SCARNA20.5-201ENST00000516991 PSENENQ9NZ42 101 aa10.27□□□□□ -0.77
SCARNA20.5-201ENST00000516991 TRAV12-2A0A075B6T6 113 aa10.26□□□□□ -0.77
SCARNA20.5-201ENST00000516991 PLAC8L1A1L4L8 177 aa10.26□□□□□ -0.77
SCARNA20.5-201ENST00000516991 C9orf170A2RU37 121 aa10.26□□□□□ -0.77
SCARNA20.5-201ENST00000516991 CBY3A6NI87 242 aa10.26□□□□□ -0.77
SCARNA20.5-201ENST00000516991 K7EPK0 472 aa10.26□□□□□ -0.77
SCARNA20.5-201ENST00000516991 CCL18P55774 89 aa10.26□□□□□ -0.77
SCARNA20.5-201ENST00000516991 POLR2GP62487 172 aaKnown RBP eCLIP10.26□□□□□ -0.77
SCARNA20.5-201ENST00000516991 PSG3Q16557 428 aa10.26□□□□□ -0.77
SCARNA20.5-201ENST00000516991 PXDC1Q5TGL8 231 aa10.26□□□□□ -0.77
SCARNA20.5-201ENST00000516991 ZNF493Q6ZR52 646 aa10.26□□□□□ -0.77
SCARNA20.5-201ENST00000516991 ZNRF2Q8NHG8 242 aa10.26□□□□□ -0.77
SCARNA20.5-201ENST00000516991 SMIM8Q96KF7 97 aa10.26□□□□□ -0.77
SCARNA20.5-201ENST00000516991 LINC01587Q99440 93 aa10.26□□□□□ -0.77
SCARNA20.5-201ENST00000516991 MGAT4CQ9UBM8 478 aa10.26□□□□□ -0.77
SCARNA20.5-201ENST00000516991 TIMM8BQ9Y5J9 83 aaPredicted RBP10.26□□□□□ -0.77
SCARNA20.5-201ENST00000516991 NBDYA0A0U1RRE5 68 aa10.25□□□□□ -0.77
SCARNA20.5-201ENST00000516991 SSSCA1O60232 199 aa10.25□□□□□ -0.77
SCARNA20.5-201ENST00000516991 ADAP1O75689 374 aa10.25□□□□□ -0.77
SCARNA20.5-201ENST00000516991 NUDT3O95989 172 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms