RNA–Protein interactions for RNA: ENST00000516424.1

RN7SKP253-201, Transcript of RNA, 7SK small nuclear pseudogene 253, humanhuman

BASIC

Gene RN7SKP253, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP253-201ENST00000516424 RBFOX3A6NFN3 312 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 NDUFS6O75380 124 aaKnown RBP4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 MT-CO2P00403 227 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 IGHV3-48P01763 117 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 PRSS1P07477 247 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 IER3P46695 156 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 B2MP61769 119 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 SELENOTP62341 195 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 AKR1C1Q04828 323 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 PEA15Q15121 130 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 DEFB112Q30KQ8 113 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 ZNF506Q5JVG8 444 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 LCN15Q6UWW0 184 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 CYP2G1PQ6ZSU1 146 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 NANPQ8TBE9 248 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 ACY3Q96HD9 319 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 TMEM68Q96MH6 324 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 TRGV9Q99603 122 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 RARRES2Q99969 163 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 KCNIP2Q9NS61 270 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 MOB4Q9Y3A3 225 aa4.41□□□□□ -1.7
RN7SKP253-201ENST00000516424 ZNF469Q96JG9 3925 aaPredicted RBP4.4□□□□□ -1.7
RN7SKP253-201ENST00000516424 TRBV9A0A0B4J1U6 114 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 MAP1LC3B2A6NCE7 125 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 H3BUX3 64 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 M0QZK8 103 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 ATP6V0E1O15342 81 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 CLN5O75503 358 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 EIF3GO75821 320 aaKnown RBP eCLIP4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 BRI3O95415 125 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 IGKV1-17P01599 117 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 IGHG2P01859 326 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 IGF1P05019 195 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 SRP19P09132 144 aaKnown RBP4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 OR5G3P0C626 314 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 IGLC1P0CG04 106 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 STAG3L2P0CL84 134 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 STAG3L3P0CL85 134 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 DEFA4P12838 97 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 ADCYAP1P18509 176 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 GATA2P23769 480 aaPredicted RBP4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 FCGR2BP31994 310 aaPredicted RBP4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 CDC34P49427 236 aaPredicted RBP4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 RND2P52198 227 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 FGF8P55075 233 aaPredicted RBP4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 PLP1P60201 277 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 BLCAPP62952 87 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 ZNF90Q03938 601 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 KHDC3LQ587J8 217 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 PATE2Q6UY27 113 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 SLC35E3Q7Z769 313 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 TMEM219Q86XT9 240 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 OR5T1Q8NG75 326 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 SUN5Q8TC36 379 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 GATAD1Q8WUU5 269 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 TMEM37Q8WXS4 190 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 PBDC1Q9BVG4 233 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 SEC11CQ9BY50 192 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 MAP1LC3BQ9GZQ8 125 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 TMEM231Q9H6L2 316 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 SLC25A22Q9H936 323 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 DNAJC4Q9NNZ3 241 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 TREM1Q9NP99 234 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 TNFRSF19Q9NS68 423 aa4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 CARHSP1Q9Y2V2 147 aaKnown RBP4.4□□□□□ -1.71
RN7SKP253-201ENST00000516424 IGHV3-21A0A0B4J1V1 117 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 A0A1B0GV50 99 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 MDFIC2A0A1B0GVS7 189 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 A0A1W2PPV4 95 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 CBY3A6NI87 242 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 SH2D7A6NKC9 451 aaPredicted RBP4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 ZFP92A6NM28 416 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 G3V318 75 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 HMGB3O15347 200 aaKnown RBP4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 NDUFB4O95168 129 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 IGHV4-59P01825 116 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 HSPB1P04792 205 aaKnown RBP4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 HIST1H1BP16401 226 aaKnown RBP4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 PSMB3P49720 205 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 YPEL3P61236 119 aaPredicted RBP4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 RHOBP62745 196 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 LY6EQ16553 131 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 HAGHQ16775 308 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 UNQ5815/PRO19632Q6UWF5 114 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 RBMS3Q6XE24 437 aaKnown RBP4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 OR5R1Q8NH85 324 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 VN1R17PQ8TDU5 208 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 ZNF414Q96IQ9 312 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 FAM167A-AS1Q96KT0 104 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 TXN2Q99757 166 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 EIF5A2Q9GZV4 153 aaKnown RBP4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 SLC35B3Q9H1N7 401 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 VAX2Q9UIW0 290 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 PITPNC1Q9UKF7 332 aa4.39□□□□□ -1.71
RN7SKP253-201ENST00000516424 MTORP42345 2549 aa4.38□□□□□ -1.71
RN7SKP253-201ENST00000516424 ZFHX3Q15911 3703 aa4.38□□□□□ -1.71
RN7SKP253-201ENST00000516424 TRAV30A0A087WSZ9 112 aa4.38□□□□□ -1.71
RN7SKP253-201ENST00000516424 TRAV41A0A0B4J266 112 aa4.38□□□□□ -1.71
RN7SKP253-201ENST00000516424 WI2-2373I1.2A0A1W2PRP0 233 aa4.38□□□□□ -1.71
RN7SKP253-201ENST00000516424 OR2J3O76001 311 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms