RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 OR1L4Q8NGR5 311 aa19.24■□□□□ 0.67
DDR1-279ENST00000515529 RCHY1Q96PM5 261 aa19.24■□□□□ 0.67
DDR1-279ENST00000515529 SEPSECSQ9HD40 501 aaKnown RBP19.24■□□□□ 0.67
DDR1-279ENST00000515529 ATF4P18848 351 aaPredicted RBP19.23■□□□□ 0.67
DDR1-279ENST00000515529 LINC00305Q7Z4B0 112 aa19.23■□□□□ 0.67
DDR1-279ENST00000515529 CHAC2Q8WUX2 184 aa19.23■□□□□ 0.67
DDR1-279ENST00000515529 PFDN5Q99471 154 aa19.23■□□□□ 0.67
DDR1-279ENST00000515529 RSG1Q9BU20 258 aa19.23■□□□□ 0.67
DDR1-279ENST00000515529 NPCDR1Q9BY65 106 aa19.23■□□□□ 0.67
DDR1-279ENST00000515529 KCNIP2Q9NS61 270 aa19.23■□□□□ 0.67
DDR1-279ENST00000515529 SLC39A9Q9NUM3 307 aa19.23■□□□□ 0.67
DDR1-279ENST00000515529 PXMP4Q9Y6I8 212 aa19.23■□□□□ 0.67
DDR1-279ENST00000515529 IFNA5P01569 189 aa19.22■□□□□ 0.67
DDR1-279ENST00000515529 PRR20EP86478 221 aa19.22■□□□□ 0.67
DDR1-279ENST00000515529 PRR20CP86479 221 aa19.22■□□□□ 0.67
DDR1-279ENST00000515529 PRR20DP86480 221 aa19.22■□□□□ 0.67
DDR1-279ENST00000515529 PRR20BP86481 221 aa19.22■□□□□ 0.67
DDR1-279ENST00000515529 PRR20AP86496 221 aa19.22■□□□□ 0.67
DDR1-279ENST00000515529 PATE2Q6UY27 113 aa19.22■□□□□ 0.67
DDR1-279ENST00000515529 STHQ8IWL8 128 aa19.22■□□□□ 0.67
DDR1-279ENST00000515529 SMIM3Q9BZL3 60 aa19.22■□□□□ 0.67
DDR1-279ENST00000515529 DNAJC4Q9NNZ3 241 aa19.22■□□□□ 0.67
DDR1-279ENST00000515529 SCGB1C1Q8TD33 95 aa19.21■□□□□ 0.67
DDR1-279ENST00000515529 KIR2DL5BA0A0G2JN68 375 aa19.2■□□□□ 0.66
DDR1-279ENST00000515529 KIR2DL5BA0A0G2JPC4 375 aa19.2■□□□□ 0.66
DDR1-279ENST00000515529 C17orf112F2Z3M2 114 aa19.2■□□□□ 0.66
DDR1-279ENST00000515529 PSMB3P49720 205 aa19.2■□□□□ 0.66
DDR1-279ENST00000515529 KIR2DL5AQ8N109 375 aa19.2■□□□□ 0.66
DDR1-279ENST00000515529 KIR2DL5BQ8NHK3 375 aa19.2■□□□□ 0.66
DDR1-279ENST00000515529 C16orf92Q96LL3 132 aa19.2■□□□□ 0.66
DDR1-279ENST00000515529 LINC00052Q96N35 136 aa19.2■□□□□ 0.66
DDR1-279ENST00000515529 WDR61Q9GZS3 305 aaKnown RBP19.2■□□□□ 0.66
DDR1-279ENST00000515529 DNAH9Q9NYC9 4486 aa19.2■□□□□ 0.66
DDR1-279ENST00000515529 UBE2CO00762 179 aa19.19■□□□□ 0.66
DDR1-279ENST00000515529 OR2T35Q8NGX2 323 aa19.19■□□□□ 0.66
DDR1-279ENST00000515529 ISLRO14498 428 aa19.18■□□□□ 0.66
DDR1-279ENST00000515529 ACTL10Q5JWF8 245 aa19.18■□□□□ 0.66
DDR1-279ENST00000515529 TMEM37Q8WXS4 190 aa19.18■□□□□ 0.66
DDR1-279ENST00000515529 KNCNA6PVL3 124 aa19.17■□□□□ 0.66
DDR1-279ENST00000515529 INO80EQ8NBZ0 244 aaPredicted RBP19.17■□□□□ 0.66
DDR1-279ENST00000515529 GATAD1Q8WUU5 269 aa19.17■□□□□ 0.66
DDR1-279ENST00000515529 RETNQ9HD89 108 aa19.17■□□□□ 0.66
DDR1-279ENST00000515529 FXYD6-FXYD2A0A087WZ82 144 aa19.16■□□□□ 0.66
DDR1-279ENST00000515529 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.16■□□□□ 0.66
DDR1-279ENST00000515529 BPIFA4PQ86YQ2 179 aa19.16■□□□□ 0.66
DDR1-279ENST00000515529 LRRC20Q8TCA0 184 aa19.16■□□□□ 0.66
DDR1-279ENST00000515529 CSTL1Q9H114 145 aa19.16■□□□□ 0.66
DDR1-279ENST00000515529 Q5BKY6 102 aa19.15■□□□□ 0.66
DDR1-279ENST00000515529 AQP10Q96PS8 301 aa19.15■□□□□ 0.66
DDR1-279ENST00000515529 SOCS3O14543 225 aa19.14■□□□□ 0.65
DDR1-279ENST00000515529 COL7A1Q02388 2944 aa19.14■□□□□ 0.65
DDR1-279ENST00000515529 Q6ZWC4 215 aa19.13■□□□□ 0.65
DDR1-279ENST00000515529 RPRMQ9NS64 109 aa19.13■□□□□ 0.65
DDR1-279ENST00000515529 A0A087X0K7 114 aa19.12■□□□□ 0.65
DDR1-279ENST00000515529 ZNF266Q14584 549 aa19.12■□□□□ 0.65
DDR1-279ENST00000515529 DEFB135Q30KP9 77 aa19.12■□□□□ 0.65
DDR1-279ENST00000515529 TRPT1Q86TN4 253 aaKnown RBP19.12■□□□□ 0.65
DDR1-279ENST00000515529 WWC2-AS2Q96NR7 200 aa19.12■□□□□ 0.65
DDR1-279ENST00000515529 PARD6GQ9BYG4 376 aaPredicted RBP19.12■□□□□ 0.65
DDR1-279ENST00000515529 CA1P00915 261 aaPredicted RBP19.11■□□□□ 0.65
DDR1-279ENST00000515529 MORN5Q5VZ52 161 aa19.11■□□□□ 0.65
DDR1-279ENST00000515529 EBLN2Q6P2I7 272 aa19.11■□□□□ 0.65
DDR1-279ENST00000515529 WFDC1Q9HC57 220 aa19.11■□□□□ 0.65
DDR1-279ENST00000515529 SPP1P10451 314 aa19.1■□□□□ 0.65
DDR1-279ENST00000515529 FAM78BQ5VT40 261 aa19.1■□□□□ 0.65
DDR1-279ENST00000515529 MORN3Q6PF18 240 aaPredicted RBP19.1■□□□□ 0.65
DDR1-279ENST00000515529 LCN15Q6UWW0 184 aa19.1■□□□□ 0.65
DDR1-279ENST00000515529 FOXI2Q6ZQN5 318 aa19.1■□□□□ 0.65
DDR1-279ENST00000515529 TP53TG1Q9Y2A0 90 aa19.1■□□□□ 0.65
DDR1-279ENST00000515529 TRAV5A0A0B4J249 113 aa19.09■□□□□ 0.65
DDR1-279ENST00000515529 SPRY2O43597 315 aa19.09■□□□□ 0.65
DDR1-279ENST00000515529 HLA-DRB4P13762 266 aa19.09■□□□□ 0.65
DDR1-279ENST00000515529 CXCL2P19875 107 aa19.09■□□□□ 0.65
DDR1-279ENST00000515529 NUTF2P61970 127 aaKnown RBP19.09■□□□□ 0.65
DDR1-279ENST00000515529 GCSAMLQ5JQS6 135 aa19.09■□□□□ 0.65
DDR1-279ENST00000515529 FFAR4Q5NUL3 377 aa19.09■□□□□ 0.65
DDR1-279ENST00000515529 C17orf77Q96MU5 243 aa19.09■□□□□ 0.65
DDR1-279ENST00000515529 TNFSF18Q9UNG2 199 aa19.09■□□□□ 0.65
DDR1-279ENST00000515529 HLA-DRB4X5D2U9 266 aa19.09■□□□□ 0.65
DDR1-279ENST00000515529 MRPS12O15235 138 aaKnown RBP19.08■□□□□ 0.64
DDR1-279ENST00000515529 SPATA31B1PQ5VZV4 182 aa19.08■□□□□ 0.64
DDR1-279ENST00000515529 OVOL2Q9BRP0 275 aa19.08■□□□□ 0.64
DDR1-279ENST00000515529 SAV1Q9H4B6 383 aaPredicted RBP19.08■□□□□ 0.64
DDR1-279ENST00000515529 H3BMM0 161 aa19.07■□□□□ 0.64
DDR1-279ENST00000515529 TMEM41BQ5BJD5 291 aa19.07■□□□□ 0.64
DDR1-279ENST00000515529 IGFL4Q6B9Z1 124 aa19.07■□□□□ 0.64
DDR1-279ENST00000515529 ZNF738Q8NE65 137 aa19.07■□□□□ 0.64
DDR1-279ENST00000515529 RNF183Q96D59 192 aa19.07■□□□□ 0.64
DDR1-279ENST00000515529 C20orf173Q96LM9 149 aa19.07■□□□□ 0.64
DDR1-279ENST00000515529 SLC50A1Q9BRV3 221 aa19.07■□□□□ 0.64
DDR1-279ENST00000515529 MRPL32Q9BYC8 188 aaKnown RBP19.07■□□□□ 0.64
DDR1-279ENST00000515529 SNRPCP09234 159 aaKnown RBP19.06■□□□□ 0.64
DDR1-279ENST00000515529 GUK1Q16774 197 aa19.06■□□□□ 0.64
DDR1-279ENST00000515529 RNF182Q8N6D2 247 aa19.06■□□□□ 0.64
DDR1-279ENST00000515529 HRH4Q9H3N8 390 aa19.06■□□□□ 0.64
DDR1-279ENST00000515529 TRAV8-2A0A0B4J237 113 aa19.05■□□□□ 0.64
DDR1-279ENST00000515529 DEFB1P60022 68 aa19.05■□□□□ 0.64
DDR1-279ENST00000515529 HSD17B11Q8NBQ5 300 aa19.05■□□□□ 0.64
DDR1-279ENST00000515529 OR4B1Q8NGF8 309 aa19.05■□□□□ 0.64
DDR1-279ENST00000515529 TIMM9Q9Y5J7 89 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms