RNA–Protein interactions for RNA: ENST00000515460.5

NUP54-218, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-218ENST00000515460 H3BUT2 72 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 IFNL4K9M1U5 179 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 PLPP3O14495 311 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 TNFSF11O14788 317 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 NUPR1O60356 82 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 PITX3O75364 302 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 KLK1P06870 262 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 IFITM1P13164 125 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 CPMP14384 443 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 IGLL1P15814 213 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 NTF3P20783 257 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 VDAC1P21796 283 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 POU3F1Q03052 451 aaPredicted RBP4.37□□□□□ -1.71
NUP54-218ENST00000515460 MEF2CQ06413 473 aaPredicted RBP4.37□□□□□ -1.71
NUP54-218ENST00000515460 ZNF415Q09FC8 603 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 NNATQ16517 81 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 Q499Y3 187 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 TTC32Q5I0X7 151 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 FAM219BQ5XKK7 198 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 OTPQ5XKR4 325 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 ACSM2BQ68CK6 577 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 SLC48A1Q6P1K1 146 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 SIGLEC15Q6ZMC9 328 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 ZNF550Q7Z398 422 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 FAM19A5Q7Z5A7 132 aaPredicted RBP4.37□□□□□ -1.71
NUP54-218ENST00000515460 ZNF584Q8IVC4 421 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 OR2L13Q8N349 312 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 TEX45Q8NA69 505 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 OR1L4Q8NGR5 311 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 OR6K6Q8NGW6 343 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 OCC1Q8TAD7 63 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 SCGB1C1Q8TD33 95 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 RPS4Y2Q8TD47 263 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 OR5P2Q8WZ92 322 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 PIGCQ92535 297 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 LSM10Q969L4 123 aaKnown RBP4.37□□□□□ -1.71
NUP54-218ENST00000515460 CNRIP1Q96F85 164 aaPredicted RBP4.37□□□□□ -1.71
NUP54-218ENST00000515460 VGLL1Q99990 258 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 SMIM7Q9BQ49 75 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 TAAR3PQ9P1P4 343 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 TP53TG3Q9ULZ0 132 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 HIGD1AQ9Y241 93 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 POLR1DQ9Y2S0 133 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 KLHDC2Q9Y2U9 406 aa4.37□□□□□ -1.71
NUP54-218ENST00000515460 STAB2Q8WWQ8 2551 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 CADP27708 2225 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 A0A087WYN8 130 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 ZNF816-ZNF321PA0A0X1KG74 233 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 LOC102725191A0A1B0GVB3 256 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 TINCRA0A1B0GVN0 87 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 A0A1W2PPI3 338 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 A0A1W2PRF3 423 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 A0A1W2PRM7 423 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 FRG2CA6NGY1 282 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 SYS1-DBNDD2H3BUS1 97 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 NBR2O15453 112 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 OR2J3O76001 311 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 CXorf1O96002 111 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 CA2P00918 260 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 ASIPP42127 132 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 KIR2DS2P43631 304 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 DSCR4P56555 118 aaPredicted RBP4.36□□□□□ -1.71
NUP54-218ENST00000515460 UBE2G1P62253 170 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 RPL23P62829 140 aaKnown RBP4.36□□□□□ -1.71
NUP54-218ENST00000515460 ZNF117Q03924 483 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 GAGE2BQ13066 116 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 GUSBP1Q15486 140 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 CD226Q15762 336 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 ZNF74Q16587 644 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 RPEL1Q2QD12 228 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 KIAA1644Q3SXP7 199 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 GAGE2EQ4V326 116 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 PSMG4Q5JS54 123 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 MEIG1Q5JSS6 88 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 CBLN3Q6UW01 205 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 ZNF329Q86UD4 541 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 BPIFA4PQ86YQ2 179 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 CNEP1R1Q8N9A8 125 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 OR4X2Q8NGF9 303 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 OR8B3Q8NGG8 313 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 OR10G7Q8NGN6 311 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 OR10J6PQ8NGY7 276 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 ABHD14BQ96IU4 210 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 OR8B2Q96RD0 313 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 CCL19Q99731 98 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 PRADC1Q9BSG0 188 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 TMEM191AQ9H0A3 160 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 SIRPDQ9H106 197 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 GAGE2DQ9UEU5 116 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 NINQ8N4C6 2090 aa4.36□□□□□ -1.71
NUP54-218ENST00000515460 TRAV18A0A075B6X5 111 aa4.35□□□□□ -1.71
NUP54-218ENST00000515460 A8MZ25 164 aa4.35□□□□□ -1.71
NUP54-218ENST00000515460 H3BMG7 143 aa4.35□□□□□ -1.71
NUP54-218ENST00000515460 C16orf97H3BN30 126 aa4.35□□□□□ -1.71
NUP54-218ENST00000515460 CCDC179H3BU77 68 aa4.35□□□□□ -1.71
NUP54-218ENST00000515460 ZNF737O75373 536 aa4.35□□□□□ -1.71
NUP54-218ENST00000515460 MT-ATP8P03928 68 aa4.35□□□□□ -1.71
NUP54-218ENST00000515460 CSN3P07498 182 aa4.35□□□□□ -1.71
NUP54-218ENST00000515460 RPL7P18124 248 aaKnown RBP4.35□□□□□ -1.71
NUP54-218ENST00000515460 BLVRBP30043 206 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms