RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SHANK2-AS3Q9BTD1 123 aa17.74■□□□□ 0.43
SNF8-213ENST00000514929 K7EPK0 472 aa17.73■□□□□ 0.43
SNF8-213ENST00000514929 BCAP31P51572 246 aa17.73■□□□□ 0.43
SNF8-213ENST00000514929 FXYD7P58549 80 aa17.73■□□□□ 0.43
SNF8-213ENST00000514929 PLP1P60201 277 aa17.73■□□□□ 0.43
SNF8-213ENST00000514929 SLC38A11Q08AI6 406 aa17.73■□□□□ 0.43
SNF8-213ENST00000514929 ARL16Q0P5N6 197 aa17.73■□□□□ 0.43
SNF8-213ENST00000514929 ASAH1Q13510 395 aa17.73■□□□□ 0.43
SNF8-213ENST00000514929 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.73■□□□□ 0.43
SNF8-213ENST00000514929 S100A7AQ86SG5 101 aa17.73■□□□□ 0.43
SNF8-213ENST00000514929 GGACTQ9BVM4 153 aa17.73■□□□□ 0.43
SNF8-213ENST00000514929 HRH4Q9H3N8 390 aa17.73■□□□□ 0.43
SNF8-213ENST00000514929 HYDINQ4G0P3 5121 aa17.73■□□□□ 0.43
SNF8-213ENST00000514929 A6NHS1 94 aa17.72■□□□□ 0.43
SNF8-213ENST00000514929 F6UB75 175 aa17.72■□□□□ 0.43
SNF8-213ENST00000514929 FGL1Q08830 312 aa17.72■□□□□ 0.43
SNF8-213ENST00000514929 C2orf50Q96LR7 162 aa17.72■□□□□ 0.43
SNF8-213ENST00000514929 CLUHP3Q96NS8 147 aa17.72■□□□□ 0.43
SNF8-213ENST00000514929 ARL6Q9H0F7 186 aa17.72■□□□□ 0.43
SNF8-213ENST00000514929 GOSR2O14653 212 aa17.71■□□□□ 0.43
SNF8-213ENST00000514929 DEDDO75618 318 aa17.71■□□□□ 0.43
SNF8-213ENST00000514929 RPL7P18124 248 aaKnown RBP17.71■□□□□ 0.43
SNF8-213ENST00000514929 CAV2P51636 162 aa17.71■□□□□ 0.43
SNF8-213ENST00000514929 ZNF546Q86UE3 836 aa17.71■□□□□ 0.43
SNF8-213ENST00000514929 C20orf173Q96LM9 149 aa17.71■□□□□ 0.43
SNF8-213ENST00000514929 C17orf77Q96MU5 243 aa17.71■□□□□ 0.43
SNF8-213ENST00000514929 UHRF2Q96PU4 802 aa17.71■□□□□ 0.43
SNF8-213ENST00000514929 ELOA3CA0A087WX78 387 aaPredicted RBP17.7■□□□□ 0.42
SNF8-213ENST00000514929 A0A0J9YX75 114 aa17.7■□□□□ 0.42
SNF8-213ENST00000514929 PVALBP20472 110 aaPredicted RBP17.7■□□□□ 0.42
SNF8-213ENST00000514929 FAM78BQ5VT40 261 aa17.7■□□□□ 0.42
SNF8-213ENST00000514929 ENKURQ8TC29 256 aa17.7■□□□□ 0.42
SNF8-213ENST00000514929 AGPAT2O15120 278 aa17.69■□□□□ 0.42
SNF8-213ENST00000514929 HLA-DMBP28068 263 aa17.69■□□□□ 0.42
SNF8-213ENST00000514929 S100A10P60903 97 aa17.69■□□□□ 0.42
SNF8-213ENST00000514929 PSG9Q00887 426 aa17.69■□□□□ 0.42
SNF8-213ENST00000514929 C2CD4CQ8TF44 421 aa17.69■□□□□ 0.42
SNF8-213ENST00000514929 PTTG2Q9NZH5 202 aa17.69■□□□□ 0.42
SNF8-213ENST00000514929 C11orf94C9JXX5 98 aa17.68■□□□□ 0.42
SNF8-213ENST00000514929 UPK1BO75841 260 aa17.68■□□□□ 0.42
SNF8-213ENST00000514929 PXDC1Q5TGL8 231 aa17.68■□□□□ 0.42
SNF8-213ENST00000514929 IGFL4Q6B9Z1 124 aa17.68■□□□□ 0.42
SNF8-213ENST00000514929 ZNF709Q8N972 641 aa17.68■□□□□ 0.42
SNF8-213ENST00000514929 SLC35B3Q9H1N7 401 aa17.68■□□□□ 0.42
SNF8-213ENST00000514929 ARV1Q9H2C2 271 aa17.68■□□□□ 0.42
SNF8-213ENST00000514929 RNF24Q9Y225 148 aa17.68■□□□□ 0.42
SNF8-213ENST00000514929 IGHV3OR16-12A0A075B7B8 117 aa17.67■□□□□ 0.42
SNF8-213ENST00000514929 FAM24AA6NFZ4 105 aa17.67■□□□□ 0.42
SNF8-213ENST00000514929 CST7O76096 145 aa17.67■□□□□ 0.42
SNF8-213ENST00000514929 PATE2Q6UY27 113 aa17.67■□□□□ 0.42
SNF8-213ENST00000514929 ZNF705AQ6ZN79 300 aaPredicted RBP17.67■□□□□ 0.42
SNF8-213ENST00000514929 MGST2Q99735 147 aa17.66■□□□□ 0.42
SNF8-213ENST00000514929 C11orf1Q9H5F2 150 aa17.66■□□□□ 0.42
SNF8-213ENST00000514929 GPN1Q9HCN4 374 aaPredicted RBP17.66■□□□□ 0.42
SNF8-213ENST00000514929 TRAV8-2A0A0B4J237 113 aa17.65■□□□□ 0.42
SNF8-213ENST00000514929 ZNF705FA8MVS1 300 aaPredicted RBP17.65■□□□□ 0.42
SNF8-213ENST00000514929 ZNF705DP0CH99 300 aaPredicted RBP17.65■□□□□ 0.42
SNF8-213ENST00000514929 ZNF705BP0CI00 300 aaPredicted RBP17.65■□□□□ 0.42
SNF8-213ENST00000514929 RAB31Q13636 194 aa17.65■□□□□ 0.42
SNF8-213ENST00000514929 RAB32Q13637 225 aa17.65■□□□□ 0.42
SNF8-213ENST00000514929 Q6ZTC4 211 aa17.65■□□□□ 0.42
SNF8-213ENST00000514929 RNF182Q8N6D2 247 aa17.65■□□□□ 0.42
SNF8-213ENST00000514929 NEU1Q99519 415 aa17.65■□□□□ 0.42
SNF8-213ENST00000514929 SMIM9A6NGZ8 99 aa17.64■□□□□ 0.41
SNF8-213ENST00000514929 COX7A2P2O60397 106 aa17.64■□□□□ 0.41
SNF8-213ENST00000514929 LINC00305Q7Z4B0 112 aa17.64■□□□□ 0.41
SNF8-213ENST00000514929 LRRC20Q8TCA0 184 aa17.64■□□□□ 0.41
SNF8-213ENST00000514929 LYRM2Q9NU23 88 aaPredicted RBP17.64■□□□□ 0.41
SNF8-213ENST00000514929 UQCC1Q9NVA1 299 aa17.64■□□□□ 0.41
SNF8-213ENST00000514929 CELA1Q9UNI1 258 aa17.64■□□□□ 0.41
SNF8-213ENST00000514929 GOLT1BQ9Y3E0 138 aa17.64■□□□□ 0.41
SNF8-213ENST00000514929 A0A087X0K7 114 aa17.63■□□□□ 0.41
SNF8-213ENST00000514929 TRAV10A0A0B4J240 114 aa17.63■□□□□ 0.41
SNF8-213ENST00000514929 IGLL5B9A064 214 aa17.63■□□□□ 0.41
SNF8-213ENST00000514929 DUSP14O95147 198 aaKnown RBP17.63■□□□□ 0.41
SNF8-213ENST00000514929 CAMLGP49069 296 aa17.63■□□□□ 0.41
SNF8-213ENST00000514929 TCTAP57738 103 aa17.63■□□□□ 0.41
SNF8-213ENST00000514929 IL15RAQ13261 267 aa17.63■□□□□ 0.41
SNF8-213ENST00000514929 ZNF738Q8NE65 137 aa17.63■□□□□ 0.41
SNF8-213ENST00000514929 SULT1A1P50225 295 aa17.62■□□□□ 0.41
SNF8-213ENST00000514929 CNN1P51911 297 aaKnown RBP17.62■□□□□ 0.41
SNF8-213ENST00000514929 IFITM3Q01628 133 aa17.62■□□□□ 0.41
SNF8-213ENST00000514929 LGALS9CQ6DKI2 356 aa17.62■□□□□ 0.41
SNF8-213ENST00000514929 NRARPQ7Z6K4 114 aa17.62■□□□□ 0.41
SNF8-213ENST00000514929 STX12Q86Y82 276 aa17.62■□□□□ 0.41
SNF8-213ENST00000514929 RFNGQ9Y644 331 aa17.62■□□□□ 0.41
SNF8-213ENST00000514929 TMEM189A5PLL7 270 aa17.61■□□□□ 0.41
SNF8-213ENST00000514929 A8MTW9 85 aa17.61■□□□□ 0.41
SNF8-213ENST00000514929 S100A11P31949 105 aa17.61■□□□□ 0.41
SNF8-213ENST00000514929 EMP1P54849 157 aa17.61■□□□□ 0.41
SNF8-213ENST00000514929 ZNF767PQ75MW2 155 aa17.61■□□□□ 0.41
SNF8-213ENST00000514929 TMEM252Q8N6L7 170 aa17.61■□□□□ 0.41
SNF8-213ENST00000514929 WDR83OSQ9Y284 106 aa17.61■□□□□ 0.41
SNF8-213ENST00000514929 IGSF23A1L1A6 192 aa17.6■□□□□ 0.41
SNF8-213ENST00000514929 CXCL3P19876 107 aa17.6■□□□□ 0.41
SNF8-213ENST00000514929 HBG1P69891 147 aa17.6■□□□□ 0.41
SNF8-213ENST00000514929 HBG2P69892 147 aa17.6■□□□□ 0.41
SNF8-213ENST00000514929 C12orf74Q32Q52 190 aa17.6■□□□□ 0.41
SNF8-213ENST00000514929 C10orf113Q5VZT2 155 aa17.6■□□□□ 0.41
SNF8-213ENST00000514929 AMTNQ6UX39 209 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms