RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 UHRF2Q96PU4 802 aa9.05□□□□□ -0.96
PDLIM5-220ENST00000514830 SEPSECSQ9HD40 501 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-220ENST00000514830 RPRMQ9NS64 109 aa9.05□□□□□ -0.96
PDLIM5-220ENST00000514830 TMEM14CQ9P0S9 112 aa9.05□□□□□ -0.96
PDLIM5-220ENST00000514830 DOK5Q9P104 306 aa9.05□□□□□ -0.96
PDLIM5-220ENST00000514830 MLXQ9UH92 298 aa9.05□□□□□ -0.96
PDLIM5-220ENST00000514830 TRAV2A0A0B4J234 112 aa9.04□□□□□ -0.96
PDLIM5-220ENST00000514830 MRPS12O15235 138 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-220ENST00000514830 SAP30O75446 220 aa9.04□□□□□ -0.96
PDLIM5-220ENST00000514830 RPL7P18124 248 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-220ENST00000514830 EDN2P20800 178 aa9.04□□□□□ -0.96
PDLIM5-220ENST00000514830 MEOX2P50222 304 aa9.04□□□□□ -0.96
PDLIM5-220ENST00000514830 SULT1A2P50226 295 aa9.04□□□□□ -0.96
PDLIM5-220ENST00000514830 STXBP6Q8NFX7 210 aa9.04□□□□□ -0.96
PDLIM5-220ENST00000514830 FAM167A-AS1Q96KT0 104 aa9.04□□□□□ -0.96
PDLIM5-220ENST00000514830 SCRT1Q9BWW7 348 aa9.04□□□□□ -0.96
PDLIM5-220ENST00000514830 PLA2G2EQ9NZK7 142 aa9.04□□□□□ -0.96
PDLIM5-220ENST00000514830 NOTCH3Q9UM47 2321 aa9.04□□□□□ -0.96
PDLIM5-220ENST00000514830 A0A087X0K7 114 aa9.03□□□□□ -0.96
PDLIM5-220ENST00000514830 CTXND1A0A1B0GTU2 59 aa9.03□□□□□ -0.96
PDLIM5-220ENST00000514830 A0A1W2PPV4 95 aa9.03□□□□□ -0.96
PDLIM5-220ENST00000514830 TSPAN4O14817 238 aa9.03□□□□□ -0.96
PDLIM5-220ENST00000514830 CDC34P49427 236 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-220ENST00000514830 TAS2R45P59539 299 aa9.03□□□□□ -0.96
PDLIM5-220ENST00000514830 KHDC3LQ587J8 217 aa9.03□□□□□ -0.96
PDLIM5-220ENST00000514830 MORN5Q5VZ52 161 aa9.03□□□□□ -0.96
PDLIM5-220ENST00000514830 SIGLEC15Q6ZMC9 328 aa9.03□□□□□ -0.96
PDLIM5-220ENST00000514830 MIR17HGQ75NE6 70 aa9.03□□□□□ -0.96
PDLIM5-220ENST00000514830 BPIFA4PQ86YQ2 179 aa9.03□□□□□ -0.96
PDLIM5-220ENST00000514830 OR8I2Q8N0Y5 310 aa9.03□□□□□ -0.96
PDLIM5-220ENST00000514830 DYNLRB2Q8TF09 96 aa9.03□□□□□ -0.96
PDLIM5-220ENST00000514830 ACTR3CQ9C0K3 210 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-220ENST00000514830 CMYA5Q8N3K9 4069 aa9.02□□□□□ -0.96
PDLIM5-220ENST00000514830 IGHV3-49A0A0A0MS15 119 aa9.02□□□□□ -0.97
PDLIM5-220ENST00000514830 STAG3L2P0CL84 134 aa9.02□□□□□ -0.97
PDLIM5-220ENST00000514830 STAG3L3P0CL85 134 aa9.02□□□□□ -0.97
PDLIM5-220ENST00000514830 GP9P14770 177 aa9.02□□□□□ -0.97
PDLIM5-220ENST00000514830 GALR1P47211 349 aa9.02□□□□□ -0.97
PDLIM5-220ENST00000514830 SAMD13Q5VXD3 122 aa9.02□□□□□ -0.97
PDLIM5-220ENST00000514830 SPATA31B1PQ5VZV4 182 aa9.02□□□□□ -0.97
PDLIM5-220ENST00000514830 TEX261Q6UWH6 196 aa9.02□□□□□ -0.97
PDLIM5-220ENST00000514830 PQLC2Q6ZP29 291 aa9.02□□□□□ -0.97
PDLIM5-220ENST00000514830 TCF24Q7RTU0 167 aa9.02□□□□□ -0.97
PDLIM5-220ENST00000514830 MBD3L1Q8WWY6 194 aa9.02□□□□□ -0.97
PDLIM5-220ENST00000514830 RAB24Q969Q5 203 aa9.02□□□□□ -0.97
PDLIM5-220ENST00000514830 SPAG8Q99932 426 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-220ENST00000514830 SLC25A2Q9BXI2 301 aa9.02□□□□□ -0.97
PDLIM5-220ENST00000514830 ZMAT5Q9UDW3 170 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-220ENST00000514830 SORL1Q92673 2214 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 IGHV3OR16-13A0A075B7E8 117 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 IGHV3-74A0A0B4J1X5 117 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 TRAV1-1A0A0B4J248 108 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 ZNF253O75346 499 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 IGLC2P0DOY2 106 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 IGLL1P15814 213 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 EGFEM1PQ0D2K5 195 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 ZNF726P1Q15940 193 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 GUK1Q16774 197 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 CD300EQ496F6 205 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 LEMD1Q68G75 181 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 LCN12Q6JVE5 192 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 FAM122CQ6P4D5 195 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 TMEM61Q8N0U2 210 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 SUN5Q8TC36 379 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 RNF141Q8WVD5 230 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 HRH4Q9H3N8 390 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 SLC25A22Q9H936 323 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 SMAD5-AS1Q9Y6J3 95 aa9.01□□□□□ -0.97
PDLIM5-220ENST00000514830 TRAV5A0A0B4J249 113 aa9□□□□□ -0.97
PDLIM5-220ENST00000514830 IGHV3-66A0A0C4DH42 116 aa9□□□□□ -0.97
PDLIM5-220ENST00000514830 CXorf1O96002 111 aa9□□□□□ -0.97
PDLIM5-220ENST00000514830 HIST1H1EP10412 219 aaKnown RBP9□□□□□ -0.97
PDLIM5-220ENST00000514830 PDE6HQ13956 83 aa9□□□□□ -0.97
PDLIM5-220ENST00000514830 SAMD5Q5TGI4 173 aa9□□□□□ -0.97
PDLIM5-220ENST00000514830 ALKAL2Q6UX46 152 aa9□□□□□ -0.97
PDLIM5-220ENST00000514830 RBPMS2Q6ZRY4 209 aaKnown RBP9□□□□□ -0.97
PDLIM5-220ENST00000514830 ZNF680Q8NEM1 530 aa9□□□□□ -0.97
PDLIM5-220ENST00000514830 LRRC20Q8TCA0 184 aa9□□□□□ -0.97
PDLIM5-220ENST00000514830 SAT2Q96F10 170 aaPredicted RBP9□□□□□ -0.97
PDLIM5-220ENST00000514830 ZNF503Q96F45 646 aa9□□□□□ -0.97
PDLIM5-220ENST00000514830 C17orf77Q96MU5 243 aa9□□□□□ -0.97
PDLIM5-220ENST00000514830 FAM110AQ9BQ89 295 aa9□□□□□ -0.97
PDLIM5-220ENST00000514830 OR51M1Q9H341 326 aa9□□□□□ -0.97
PDLIM5-220ENST00000514830 NRN1Q9NPD7 142 aa9□□□□□ -0.97
PDLIM5-220ENST00000514830 ZNF785A8K8V0 405 aa8.99□□□□□ -0.97
PDLIM5-220ENST00000514830 SOCS3O14543 225 aa8.99□□□□□ -0.97
PDLIM5-220ENST00000514830 IFNA7P01567 189 aa8.99□□□□□ -0.97
PDLIM5-220ENST00000514830 FHITP49789 147 aa8.99□□□□□ -0.97
PDLIM5-220ENST00000514830 PAFAH1B2P68402 229 aa8.99□□□□□ -0.97
PDLIM5-220ENST00000514830 BEAN1Q3B7T3 259 aa8.99□□□□□ -0.97
PDLIM5-220ENST00000514830 SSX7Q7RTT5 188 aa8.99□□□□□ -0.97
PDLIM5-220ENST00000514830 DCANP1Q8TF63 244 aa8.99□□□□□ -0.97
PDLIM5-220ENST00000514830 FXYD5Q96DB9 178 aa8.99□□□□□ -0.97
PDLIM5-220ENST00000514830 PAXXQ9BUH6 204 aa8.99□□□□□ -0.97
PDLIM5-220ENST00000514830 MS4A6AQ9H2W1 248 aa8.99□□□□□ -0.97
PDLIM5-220ENST00000514830 MAP1LC3B2A6NCE7 125 aa8.98□□□□□ -0.97
PDLIM5-220ENST00000514830 OR4C46A6NHA9 309 aa8.98□□□□□ -0.97
PDLIM5-220ENST00000514830 K7EQG2 157 aa8.98□□□□□ -0.97
PDLIM5-220ENST00000514830 ARL14EPLP0DKL9 152 aa8.98□□□□□ -0.97
PDLIM5-220ENST00000514830 ATF4P18848 351 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms