RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 COX8AP10176 69 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 TANC2Q9HCD6 1990 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 A0A1B0GUT8 65 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 IFI27P40305 119 aaPredicted RBP7.76□□□□□ -1.17
VCAN-210ENST00000513960 FAM222BQ8WU58 562 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 FAM167A-AS1Q96KT0 104 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 JMJD8Q96S16 334 aa7.76□□□□□ -1.17
VCAN-210ENST00000513960 PPIAL4CA0A0B4J2A2 164 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 PRSS47A8MTI9 375 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 SCGB2A1O75556 95 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 PPIAL4GP0DN37 164 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 CGB3P0DN86 165 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 CGB7P0DN87 165 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 CCL8P80075 99 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 FAM57AQ8TBR7 257 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 TET2Q6N021 2002 aaPredicted RBP7.75□□□□□ -1.17
VCAN-210ENST00000513960 C9orf118A6NHY6 69 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 PRRG2O14669 202 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 TNFRSF1AP19438 455 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 FAM231DQ6ZW35 169 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 DDB2Q92466 427 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 ZNF414Q96IQ9 312 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 K7ERJ3 54 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 C2orf83Q53S99 150 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 WFDC12Q8WWY7 111 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 GAFA1Q96PS6 74 aa7.75□□□□□ -1.17
VCAN-210ENST00000513960 NHP2Q9NX24 153 aaKnown RBP7.75□□□□□ -1.17
VCAN-210ENST00000513960 TCRBV4S1A1TA0A5B7 111 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 SMKR1H3BMG3 65 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 K7EP34 96 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 CCL3L1P16619 93 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 VSTM2AQ8TAG5 236 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 FXYD5Q96DB9 178 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 S4R3C0 116 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 TM4SF5O14894 197 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 FAM120AOSQ5T036 256 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 SAMD5Q5TGI4 173 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 PATE2Q6UY27 113 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 PCP2Q8IVA1 136 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 TTTY13Q9BZ97 58 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 C16orf97H3BN30 126 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 K7EM74 188 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 FAM106CPP0CH98 169 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 SMIM13P0DJ93 91 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 FAM106AQ4KMX7 169 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 ZNF788Q6ZQV5 615 aa7.74□□□□□ -1.17
VCAN-210ENST00000513960 D6R8Y8 96 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 E7EUB6 86 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 J3QR89 54 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 TCRAP04437 139 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 STXBP6Q8NFX7 210 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 PRELID3AQ96N28 172 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 MRPL36Q9P0J6 103 aaKnown RBP7.73□□□□□ -1.17
VCAN-210ENST00000513960 PPIAL4EA0A075B759 164 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 TEX48A0A1B0GUV7 120 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 VSTM5A8MXK1 200 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 K7EQM0 130 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 PPIAL4FP0DN26 164 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 AZU1P20160 251 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 TMEM30BQ3MIR4 351 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 RPUSD1Q9UJJ7 312 aaKnown RBP7.73□□□□□ -1.17
VCAN-210ENST00000513960 DSCAMO60469 2012 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 CKS2P33552 79 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 HSD52Q0P140 79 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 SFTA2Q6UW10 78 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 C22orf34Q6ZV56 151 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 HIGD1AQ9Y241 93 aa7.73□□□□□ -1.17
VCAN-210ENST00000513960 SPTBN1Q01082 2364 aaKnown RBP7.73□□□□□ -1.17
VCAN-210ENST00000513960 H3BRM9 83 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 LOXL1Q08397 574 aaPredicted RBP7.72□□□□□ -1.17
VCAN-210ENST00000513960 PSG3Q16557 428 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 FMC1Q96HJ9 113 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 ZNF747Q9BV97 191 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 TSSC4Q9Y5U2 329 aaPredicted RBP7.72□□□□□ -1.17
VCAN-210ENST00000513960 PTPRZ1P23471 2315 aaPredicted RBP7.72□□□□□ -1.17
VCAN-210ENST00000513960 SCGB2A2Q13296 93 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 VMA21Q3ZAQ7 101 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 LCNL1Q6ZST4 164 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 Q71RC1 249 aaPredicted RBP7.72□□□□□ -1.17
VCAN-210ENST00000513960 AMN1Q8IY45 258 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 BCL6BQ8N143 479 aaPredicted RBP7.72□□□□□ -1.17
VCAN-210ENST00000513960 ZCCHC24Q8N2G6 241 aaKnown RBP7.72□□□□□ -1.17
VCAN-210ENST00000513960 CACNG8Q8WXS5 425 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 DPF1Q92782 380 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 COL25A1Q9BXS0 654 aaPredicted RBP7.72□□□□□ -1.17
VCAN-210ENST00000513960 ACACAQ13085 2346 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 PCNX1Q96RV3 2341 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 A0A1B0GXF2 115 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 G3V4G9 280 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 SMAD7O15105 426 aaKnown RBP7.72□□□□□ -1.17
VCAN-210ENST00000513960 WT1-ASQ06250 92 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 ADAMTSL5Q6ZMM2 481 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 SLC25A48Q6ZT89 311 aaKnown RBP7.72□□□□□ -1.17
VCAN-210ENST00000513960 C2orf91Q6ZV80 131 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 NUP37Q8NFH4 326 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 ZNF714Q96N38 554 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 SIGMAR1Q99720 223 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 LINC00312Q9Y6C7 94 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 PTPRBP23467 1997 aa7.72□□□□□ -1.17
VCAN-210ENST00000513960 TMEM213A2RRL7 107 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 1315.2 ms