RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 NUP62P37198 522 aaPredicted RBP6.74□□□□□ -1.33
TCOF1-212ENST00000513538 ATP5IP56385 69 aaPredicted RBP6.74□□□□□ -1.33
TCOF1-212ENST00000513538 KRTAP10-2P60368 255 aa6.74□□□□□ -1.33
TCOF1-212ENST00000513538 OR2F1Q13607 317 aa6.74□□□□□ -1.33
TCOF1-212ENST00000513538 GAMTQ14353 236 aa6.74□□□□□ -1.33
TCOF1-212ENST00000513538 FCN2Q15485 313 aa6.74□□□□□ -1.33
TCOF1-212ENST00000513538 IGF2BP2-AS1Q96M15 143 aa6.74□□□□□ -1.33
TCOF1-212ENST00000513538 MAGT1Q9H0U3 335 aa6.74□□□□□ -1.33
TCOF1-212ENST00000513538 LINC00588Q9Y4M8 146 aa6.74□□□□□ -1.33
TCOF1-212ENST00000513538 A6NJY4 79 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 ZFP92A6NM28 416 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 PRSS46E5RG02 174 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 M0R2Z0 102 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 DEFB130BP0DP73 79 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 DEFB130AP0DP74 79 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 AZU1P20160 251 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 GPX4P36969 197 aaPredicted RBP6.73□□□□□ -1.33
TCOF1-212ENST00000513538 PPP1R1AQ13522 171 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 SPINK13Q1W4C9 94 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 C1orf194Q5T5A4 169 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 SPATA31B1PQ5VZV4 182 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 IGFL4Q6B9Z1 124 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 EBLN2Q6P2I7 272 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 SPATA12Q7Z6I5 190 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 TMED4Q7Z7H5 227 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 NOXA1Q86UR1 476 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 BAP18Q8IXM2 172 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 OR11H7Q8NGC8 314 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 ATG101Q9BSB4 218 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 SLC25A32Q9H2D1 315 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 SCRT2Q9NQ03 307 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 DOK5Q9P104 306 aa6.73□□□□□ -1.33
TCOF1-212ENST00000513538 TRAV8-2A0A0B4J237 113 aa6.72□□□□□ -1.33
TCOF1-212ENST00000513538 NDUFB6O95139 128 aa6.72□□□□□ -1.33
TCOF1-212ENST00000513538 NUDT3O95989 172 aa6.72□□□□□ -1.33
TCOF1-212ENST00000513538 BTCP35070 178 aa6.72□□□□□ -1.33
TCOF1-212ENST00000513538 CNN1P51911 297 aaKnown RBP6.72□□□□□ -1.33
TCOF1-212ENST00000513538 UBE2MP61081 183 aaKnown RBP6.72□□□□□ -1.33
TCOF1-212ENST00000513538 SPANXN2Q5MJ10 180 aa6.72□□□□□ -1.33
TCOF1-212ENST00000513538 OR8I2Q8N0Y5 310 aa6.72□□□□□ -1.33
TCOF1-212ENST00000513538 OR1S1Q8NH92 325 aa6.72□□□□□ -1.33
TCOF1-212ENST00000513538 RNF141Q8WVD5 230 aa6.72□□□□□ -1.33
TCOF1-212ENST00000513538 TMEM208Q9BTX3 173 aa6.72□□□□□ -1.33
TCOF1-212ENST00000513538 RPRMQ9NS64 109 aa6.72□□□□□ -1.33
TCOF1-212ENST00000513538 TRAV12-2A0A075B6T6 113 aa6.71□□□□□ -1.34
TCOF1-212ENST00000513538 C9orf170A2RU37 121 aa6.71□□□□□ -1.34
TCOF1-212ENST00000513538 NAP1L6A6NFF2 107 aa6.71□□□□□ -1.34
TCOF1-212ENST00000513538 LYRM9A8MSI8 78 aa6.71□□□□□ -1.34
TCOF1-212ENST00000513538 F5H768 121 aa6.71□□□□□ -1.34
TCOF1-212ENST00000513538 INSP01308 110 aa6.71□□□□□ -1.34
TCOF1-212ENST00000513538 PRB4P10163 310 aaPredicted RBP6.71□□□□□ -1.34
TCOF1-212ENST00000513538 VAMP1P23763 118 aa6.71□□□□□ -1.34
TCOF1-212ENST00000513538 ID3Q02535 119 aa6.71□□□□□ -1.34
TCOF1-212ENST00000513538 TMEM182Q6ZP80 229 aaPredicted RBP6.71□□□□□ -1.34
TCOF1-212ENST00000513538 RNF182Q8N6D2 247 aa6.71□□□□□ -1.34
TCOF1-212ENST00000513538 SLC35E1Q96K37 410 aa6.71□□□□□ -1.34
TCOF1-212ENST00000513538 C16orf92Q96LL3 132 aa6.71□□□□□ -1.34
TCOF1-212ENST00000513538 TRGV9Q99603 122 aa6.71□□□□□ -1.34
TCOF1-212ENST00000513538 RSG1Q9BU20 258 aa6.71□□□□□ -1.34
TCOF1-212ENST00000513538 ZNF98A6NK75 572 aa6.7□□□□□ -1.34
TCOF1-212ENST00000513538 SNRPGP15A8MWD9 76 aa6.7□□□□□ -1.34
TCOF1-212ENST00000513538 SYNGR2O43760 224 aa6.7□□□□□ -1.34
TCOF1-212ENST00000513538 TSPOP30536 169 aa6.7□□□□□ -1.34
TCOF1-212ENST00000513538 GGNBP1Q5YKI7 109 aa6.7□□□□□ -1.34
TCOF1-212ENST00000513538 THAP8Q8NA92 274 aa6.7□□□□□ -1.34
TCOF1-212ENST00000513538 PPP1R14BQ96C90 147 aa6.7□□□□□ -1.34
TCOF1-212ENST00000513538 SLC25A22Q9H936 323 aa6.7□□□□□ -1.34
TCOF1-212ENST00000513538 PFDN2Q9UHV9 154 aa6.7□□□□□ -1.34
TCOF1-212ENST00000513538 FLVCR2Q9UPI3 526 aa6.7□□□□□ -1.34
TCOF1-212ENST00000513538 PMS2P5A8MQ11 134 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 PLA2G10O15496 165 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 MED6O75586 246 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 ADAP1O75689 374 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 ATP5G1P05496 136 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 HOXB5P09067 269 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 OR4E1P0C645 316 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 IAPPP10997 89 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 IL7P13232 177 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 GATA2P23769 480 aaPredicted RBP6.69□□□□□ -1.34
TCOF1-212ENST00000513538 GALR1P47211 349 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 ATP5G3P48201 142 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 MEOX2P50222 304 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 CCL18P55774 89 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 SSX7Q7RTT5 188 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 OR4D5Q8NGN0 318 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 SLC25A39Q9BZJ4 359 aaPredicted RBP6.69□□□□□ -1.34
TCOF1-212ENST00000513538 Q9H8V8 135 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 NDUFA13Q9P0J0 144 aa6.69□□□□□ -1.34
TCOF1-212ENST00000513538 BOLA2-SMG1P6H3BVE0 249 aa6.68□□□□□ -1.34
TCOF1-212ENST00000513538 RAB11AP62491 216 aa6.68□□□□□ -1.34
TCOF1-212ENST00000513538 SAMD13Q5VXD3 122 aa6.68□□□□□ -1.34
TCOF1-212ENST00000513538 TRIQKQ629K1 86 aa6.68□□□□□ -1.34
TCOF1-212ENST00000513538 UHRF2Q96PU4 802 aa6.68□□□□□ -1.34
TCOF1-212ENST00000513538 CIB3Q96Q77 187 aaPredicted RBP6.68□□□□□ -1.34
TCOF1-212ENST00000513538 CBY3A6NI87 242 aa6.67□□□□□ -1.34
TCOF1-212ENST00000513538 WRBO00258 174 aa6.67□□□□□ -1.34
TCOF1-212ENST00000513538 DUSP14O95147 198 aaKnown RBP6.67□□□□□ -1.34
TCOF1-212ENST00000513538 FABP1P07148 127 aa6.67□□□□□ -1.34
TCOF1-212ENST00000513538 ANXA7P20073 488 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms