RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ACTR3CQ9C0K3 210 aaPredicted RBP9.5□□□□□ -0.89
PDPN-210ENST00000513143 TMEM231Q9H6L2 316 aa9.5□□□□□ -0.89
PDPN-210ENST00000513143 TRAV5A0A0B4J249 113 aa9.49□□□□□ -0.89
PDPN-210ENST00000513143 IGHV3-66A0A0C4DH42 116 aa9.49□□□□□ -0.89
PDPN-210ENST00000513143 IFNA7P01567 189 aa9.49□□□□□ -0.89
PDPN-210ENST00000513143 FHITP49789 147 aa9.49□□□□□ -0.89
PDPN-210ENST00000513143 IFITM2Q01629 132 aa9.49□□□□□ -0.89
PDPN-210ENST00000513143 ZNF726P1Q15940 193 aa9.49□□□□□ -0.89
PDPN-210ENST00000513143 FAM213BQ8TBF2 198 aa9.49□□□□□ -0.89
PDPN-210ENST00000513143 RNF141Q8WVD5 230 aa9.49□□□□□ -0.89
PDPN-210ENST00000513143 GLMPQ8WWB7 406 aa9.49□□□□□ -0.89
PDPN-210ENST00000513143 RAB24Q969Q5 203 aa9.49□□□□□ -0.89
PDPN-210ENST00000513143 GRAMD2BQ96HH9 432 aa9.49□□□□□ -0.89
PDPN-210ENST00000513143 FAM167A-AS1Q96KT0 104 aa9.49□□□□□ -0.89
PDPN-210ENST00000513143 SLC25A2Q9BXI2 301 aa9.49□□□□□ -0.89
PDPN-210ENST00000513143 SLC25A22Q9H936 323 aa9.49□□□□□ -0.89
PDPN-210ENST00000513143 CTXND1A0A1B0GTU2 59 aa9.48□□□□□ -0.89
PDPN-210ENST00000513143 CD33P20138 364 aa9.48□□□□□ -0.89
PDPN-210ENST00000513143 TAS2R45P59539 299 aa9.48□□□□□ -0.89
PDPN-210ENST00000513143 SSX7Q7RTT5 188 aa9.48□□□□□ -0.89
PDPN-210ENST00000513143 OR8I2Q8N0Y5 310 aa9.48□□□□□ -0.89
PDPN-210ENST00000513143 GPR82Q96P67 336 aa9.48□□□□□ -0.89
PDPN-210ENST00000513143 MLXQ9UH92 298 aa9.48□□□□□ -0.89
PDPN-210ENST00000513143 TRRAPQ9Y4A5 3859 aa9.47□□□□□ -0.89
PDPN-210ENST00000513143 ANK2Q01484 3957 aa9.47□□□□□ -0.89
PDPN-210ENST00000513143 MRPS12O15235 138 aaKnown RBP9.47□□□□□ -0.89
PDPN-210ENST00000513143 EIF3GO75821 320 aaKnown RBP eCLIP9.47□□□□□ -0.89
PDPN-210ENST00000513143 STAG3L2P0CL84 134 aa9.47□□□□□ -0.89
PDPN-210ENST00000513143 STAG3L3P0CL85 134 aa9.47□□□□□ -0.89
PDPN-210ENST00000513143 RPL7P18124 248 aaKnown RBP9.47□□□□□ -0.89
PDPN-210ENST00000513143 DEFB114Q30KQ6 69 aa9.47□□□□□ -0.89
PDPN-210ENST00000513143 KHDC3LQ587J8 217 aa9.47□□□□□ -0.89
PDPN-210ENST00000513143 FAM90A2PQ658T7 463 aa9.47□□□□□ -0.89
PDPN-210ENST00000513143 BPIFA4PQ86YQ2 179 aa9.47□□□□□ -0.89
PDPN-210ENST00000513143 STXBP6Q8NFX7 210 aa9.47□□□□□ -0.89
PDPN-210ENST00000513143 MBD3L1Q8WWY6 194 aa9.47□□□□□ -0.89
PDPN-210ENST00000513143 ZNF503Q96F45 646 aa9.47□□□□□ -0.89
PDPN-210ENST00000513143 TMEM14CQ9P0S9 112 aa9.47□□□□□ -0.89
PDPN-210ENST00000513143 UBQLN2Q9UHD9 624 aa9.47□□□□□ -0.89
PDPN-210ENST00000513143 HELTA6NFD8 242 aa9.46□□□□□ -0.9
PDPN-210ENST00000513143 ZNF705EA8MWA4 302 aaPredicted RBP9.46□□□□□ -0.9
PDPN-210ENST00000513143 HMGB3O15347 200 aaKnown RBP9.46□□□□□ -0.9
PDPN-210ENST00000513143 SAP30O75446 220 aa9.46□□□□□ -0.9
PDPN-210ENST00000513143 CD5P06127 495 aa9.46□□□□□ -0.9
PDPN-210ENST00000513143 GP9P14770 177 aa9.46□□□□□ -0.9
PDPN-210ENST00000513143 INSL3P51460 131 aa9.46□□□□□ -0.9
PDPN-210ENST00000513143 SIGLEC15Q6ZMC9 328 aa9.46□□□□□ -0.9
PDPN-210ENST00000513143 PQLC2Q6ZP29 291 aa9.46□□□□□ -0.9
PDPN-210ENST00000513143 TCF24Q7RTU0 167 aa9.46□□□□□ -0.9
PDPN-210ENST00000513143 LRRC20Q8TCA0 184 aa9.46□□□□□ -0.9
PDPN-210ENST00000513143 DYNLRB2Q8TF09 96 aa9.46□□□□□ -0.9
PDPN-210ENST00000513143 SAT2Q96F10 170 aaPredicted RBP9.46□□□□□ -0.9
PDPN-210ENST00000513143 MCRIP2Q9BUT9 160 aaKnown RBP9.46□□□□□ -0.9
PDPN-210ENST00000513143 OR51M1Q9H341 326 aa9.46□□□□□ -0.9
PDPN-210ENST00000513143 SMAD5-AS1Q9Y6J3 95 aa9.46□□□□□ -0.9
PDPN-210ENST00000513143 NOTCH3Q9UM47 2321 aa9.45□□□□□ -0.9
PDPN-210ENST00000513143 MAP1LC3B2A6NCE7 125 aa9.45□□□□□ -0.9
PDPN-210ENST00000513143 OR7C2O60412 319 aa9.45□□□□□ -0.9
PDPN-210ENST00000513143 IGLV1-51P01701 117 aa9.45□□□□□ -0.9
PDPN-210ENST00000513143 H2AFB1P0C5Y9 115 aa9.45□□□□□ -0.9
PDPN-210ENST00000513143 ARL14EPLP0DKL9 152 aa9.45□□□□□ -0.9
PDPN-210ENST00000513143 GALR1P47211 349 aa9.45□□□□□ -0.9
PDPN-210ENST00000513143 BLOC1S1P78537 153 aa9.45□□□□□ -0.9
PDPN-210ENST00000513143 C9orf66Q5T8R8 295 aa9.45□□□□□ -0.9
PDPN-210ENST00000513143 LCN15Q6UWW0 184 aa9.45□□□□□ -0.9
PDPN-210ENST00000513143 ZNF767PQ75MW2 155 aa9.45□□□□□ -0.9
PDPN-210ENST00000513143 SFT2D1Q8WV19 159 aa9.45□□□□□ -0.9
PDPN-210ENST00000513143 PAXXQ9BUH6 204 aa9.45□□□□□ -0.9
PDPN-210ENST00000513143 MAP1LC3BQ9GZQ8 125 aa9.45□□□□□ -0.9
PDPN-210ENST00000513143 SELENOKQ9Y6D0 94 aa9.45□□□□□ -0.9
PDPN-210ENST00000513143 A0A087X0K7 114 aa9.44□□□□□ -0.9
PDPN-210ENST00000513143 TRAV1-1A0A0B4J248 108 aa9.44□□□□□ -0.9
PDPN-210ENST00000513143 TRAV25A0A0B4J276 109 aa9.44□□□□□ -0.9
PDPN-210ENST00000513143 CXorf1O96002 111 aa9.44□□□□□ -0.9
PDPN-210ENST00000513143 IGLC2P0DOY2 106 aa9.44□□□□□ -0.9
PDPN-210ENST00000513143 PYYP10082 97 aa9.44□□□□□ -0.9
PDPN-210ENST00000513143 HIST1H1EP10412 219 aaKnown RBP9.44□□□□□ -0.9
PDPN-210ENST00000513143 CD300EQ496F6 205 aaPredicted RBP9.44□□□□□ -0.9
PDPN-210ENST00000513143 PRR31Q5SQ13 230 aa9.44□□□□□ -0.9
PDPN-210ENST00000513143 OR2K2Q8NGT1 345 aa9.44□□□□□ -0.9
PDPN-210ENST00000513143 FXYD5Q96DB9 178 aa9.44□□□□□ -0.9
PDPN-210ENST00000513143 C17orf77Q96MU5 243 aa9.44□□□□□ -0.9
PDPN-210ENST00000513143 HRH4Q9H3N8 390 aa9.44□□□□□ -0.9
PDPN-210ENST00000513143 ZNF785A8K8V0 405 aa9.43□□□□□ -0.9
PDPN-210ENST00000513143 H3BQ15 152 aa9.43□□□□□ -0.9
PDPN-210ENST00000513143 TSPAN4O14817 238 aa9.43□□□□□ -0.9
PDPN-210ENST00000513143 OR10J4P0C629 311 aa9.43□□□□□ -0.9
PDPN-210ENST00000513143 ATF4P18848 351 aaPredicted RBP9.43□□□□□ -0.9
PDPN-210ENST00000513143 GCHFRP30047 84 aa9.43□□□□□ -0.9
PDPN-210ENST00000513143 FGF8P55075 233 aaPredicted RBP9.43□□□□□ -0.9
PDPN-210ENST00000513143 RPL11P62913 178 aaKnown RBP9.43□□□□□ -0.9
PDPN-210ENST00000513143 TMEM61Q8N0U2 210 aa9.43□□□□□ -0.9
PDPN-210ENST00000513143 LYPD6BQ8NI32 183 aa9.43□□□□□ -0.9
PDPN-210ENST00000513143 SUN5Q8TC36 379 aa9.43□□□□□ -0.9
PDPN-210ENST00000513143 ZNF586Q9NXT0 402 aa9.43□□□□□ -0.9
PDPN-210ENST00000513143 IZUMO1RA6ND01 250 aa9.42□□□□□ -0.9
PDPN-210ENST00000513143 TEX46H3BTG2 121 aa9.42□□□□□ -0.9
PDPN-210ENST00000513143 HBE1P02100 147 aa9.42□□□□□ -0.9
PDPN-210ENST00000513143 NBEAP1P0C6P0 100 aa9.42□□□□□ -0.9
PDPN-210ENST00000513143 IGLL1P15814 213 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms