RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 HYPMO75409 117 aa11.96□□□□□ -0.49
DDX41-213ENST00000512027 RBMY1A1P0DJD3 496 aaKnown RBP11.96□□□□□ -0.49
DDX41-213ENST00000512027 RBMY1CP0DJD4 496 aa11.96□□□□□ -0.49
DDX41-213ENST00000512027 PRB4P10163 310 aaPredicted RBP11.96□□□□□ -0.49
DDX41-213ENST00000512027 RAP2BP61225 183 aa11.96□□□□□ -0.49
DDX41-213ENST00000512027 FGL1Q08830 312 aa11.96□□□□□ -0.49
DDX41-213ENST00000512027 RBMY1FQ15415 496 aaKnown RBP11.96□□□□□ -0.49
DDX41-213ENST00000512027 TMEM217Q8N7C4 229 aa11.96□□□□□ -0.49
DDX41-213ENST00000512027 C16orf92Q96LL3 132 aa11.96□□□□□ -0.49
DDX41-213ENST00000512027 MGST2Q99735 147 aa11.96□□□□□ -0.49
DDX41-213ENST00000512027 ISLRO14498 428 aa11.95□□□□□ -0.5
DDX41-213ENST00000512027 GOSR2O14653 212 aa11.95□□□□□ -0.5
DDX41-213ENST00000512027 DEDDO75618 318 aa11.95□□□□□ -0.5
DDX41-213ENST00000512027 ATF4P18848 351 aaPredicted RBP11.95□□□□□ -0.5
DDX41-213ENST00000512027 PLP1P60201 277 aa11.95□□□□□ -0.5
DDX41-213ENST00000512027 SELENOTP62341 195 aa11.95□□□□□ -0.5
DDX41-213ENST00000512027 FOXI2Q6ZQN5 318 aa11.95□□□□□ -0.5
DDX41-213ENST00000512027 RNF182Q8N6D2 247 aa11.95□□□□□ -0.5
DDX41-213ENST00000512027 OR4B1Q8NGF8 309 aa11.95□□□□□ -0.5
DDX41-213ENST00000512027 TRAV8-2A0A0B4J237 113 aa11.94□□□□□ -0.5
DDX41-213ENST00000512027 NUPR2A6NF83 97 aa11.94□□□□□ -0.5
DDX41-213ENST00000512027 ZNF705EA8MWA4 302 aaPredicted RBP11.94□□□□□ -0.5
DDX41-213ENST00000512027 INMT-MINDY4F8WBC2 141 aa11.94□□□□□ -0.5
DDX41-213ENST00000512027 JTBO76095 146 aa11.94□□□□□ -0.5
DDX41-213ENST00000512027 SNRPCP09234 159 aaKnown RBP11.94□□□□□ -0.5
DDX41-213ENST00000512027 TMEM41BQ5BJD5 291 aa11.94□□□□□ -0.5
DDX41-213ENST00000512027 CEMP1Q6PRD7 247 aaPredicted RBP11.94□□□□□ -0.5
DDX41-213ENST00000512027 C11orf45Q8TAV5 145 aa11.94□□□□□ -0.5
DDX41-213ENST00000512027 PHLDA1Q8WV24 401 aaPredicted RBP11.94□□□□□ -0.5
DDX41-213ENST00000512027 SLC35B3Q9H1N7 401 aa11.94□□□□□ -0.5
DDX41-213ENST00000512027 ARV1Q9H2C2 271 aa11.94□□□□□ -0.5
DDX41-213ENST00000512027 GPN1Q9HCN4 374 aaPredicted RBP11.94□□□□□ -0.5
DDX41-213ENST00000512027 LYRM2Q9NU23 88 aaPredicted RBP11.94□□□□□ -0.5
DDX41-213ENST00000512027 A0A0J9YX75 114 aa11.93□□□□□ -0.5
DDX41-213ENST00000512027 ZNF705DP0CH99 300 aaPredicted RBP11.93□□□□□ -0.5
DDX41-213ENST00000512027 ZNF705BP0CI00 300 aaPredicted RBP11.93□□□□□ -0.5
DDX41-213ENST00000512027 PVALBP20472 110 aaPredicted RBP11.93□□□□□ -0.5
DDX41-213ENST00000512027 HLA-DMBP28068 263 aa11.93□□□□□ -0.5
DDX41-213ENST00000512027 MEOX2P50222 304 aa11.93□□□□□ -0.5
DDX41-213ENST00000512027 FAM78BQ5VT40 261 aa11.93□□□□□ -0.5
DDX41-213ENST00000512027 MORN5Q5VZ52 161 aa11.93□□□□□ -0.5
DDX41-213ENST00000512027 ZNF546Q86UE3 836 aa11.93□□□□□ -0.5
DDX41-213ENST00000512027 TMEM252Q8N6L7 170 aa11.93□□□□□ -0.5
DDX41-213ENST00000512027 ZNF709Q8N972 641 aa11.93□□□□□ -0.5
DDX41-213ENST00000512027 GPR82Q96P67 336 aa11.93□□□□□ -0.5
DDX41-213ENST00000512027 GGACTQ9BVM4 153 aa11.93□□□□□ -0.5
DDX41-213ENST00000512027 BATF3Q9NR55 127 aa11.93□□□□□ -0.5
DDX41-213ENST00000512027 ELOA3CA0A087WX78 387 aaPredicted RBP11.92□□□□□ -0.5
DDX41-213ENST00000512027 UBE2L5PA0A1B0GUS4 154 aa11.92□□□□□ -0.5
DDX41-213ENST00000512027 CAMLGP49069 296 aa11.92□□□□□ -0.5
DDX41-213ENST00000512027 SULT1A1P50225 295 aa11.92□□□□□ -0.5
DDX41-213ENST00000512027 NUTF2P61970 127 aaKnown RBP11.92□□□□□ -0.5
DDX41-213ENST00000512027 LRRC37A5PQ49AS3 106 aa11.92□□□□□ -0.5
DDX41-213ENST00000512027 MIC13Q5XKP0 118 aa11.92□□□□□ -0.5
DDX41-213ENST00000512027 RPRMQ9NS64 109 aa11.92□□□□□ -0.5
DDX41-213ENST00000512027 IGHV3OR16-12A0A075B7B8 117 aa11.91□□□□□ -0.5
DDX41-213ENST00000512027 COX7A2P2O60397 106 aa11.91□□□□□ -0.5
DDX41-213ENST00000512027 MIFP14174 115 aa11.91□□□□□ -0.5
DDX41-213ENST00000512027 RPL7P18124 248 aaKnown RBP11.91□□□□□ -0.5
DDX41-213ENST00000512027 EBLN2Q6P2I7 272 aa11.91□□□□□ -0.5
DDX41-213ENST00000512027 LINC00305Q7Z4B0 112 aa11.91□□□□□ -0.5
DDX41-213ENST00000512027 TMEM37Q8WXS4 190 aa11.91□□□□□ -0.5
DDX41-213ENST00000512027 C1QTNF4Q9BXJ3 329 aa11.91□□□□□ -0.5
DDX41-213ENST00000512027 UQCC1Q9NVA1 299 aa11.91□□□□□ -0.5
DDX41-213ENST00000512027 OR5AC2Q9NZP5 309 aa11.91□□□□□ -0.5
DDX41-213ENST00000512027 CELA1Q9UNI1 258 aa11.91□□□□□ -0.5
DDX41-213ENST00000512027 WDR83OSQ9Y284 106 aa11.91□□□□□ -0.5
DDX41-213ENST00000512027 EPPK1P58107 5090 aaKnown RBP11.9□□□□□ -0.5
DDX41-213ENST00000512027 H3BTX0 84 aa11.9□□□□□ -0.5
DDX41-213ENST00000512027 MRPS12O15235 138 aaKnown RBP11.9□□□□□ -0.5
DDX41-213ENST00000512027 PRAF2O60831 178 aa11.9□□□□□ -0.5
DDX41-213ENST00000512027 S100A7P31151 101 aa11.9□□□□□ -0.5
DDX41-213ENST00000512027 BAXQ07812 192 aa11.9□□□□□ -0.5
DDX41-213ENST00000512027 VWC2Q2TAL6 325 aa11.9□□□□□ -0.5
DDX41-213ENST00000512027 LINC00476Q8WZB0 136 aa11.9□□□□□ -0.5
DDX41-213ENST00000512027 MARVELD1Q9BSK0 173 aa11.9□□□□□ -0.5
DDX41-213ENST00000512027 H0YIZ8 118 aa11.89□□□□□ -0.51
DDX41-213ENST00000512027 DEFA1P59665 94 aa11.89□□□□□ -0.51
DDX41-213ENST00000512027 DEFA3P59666 94 aa11.89□□□□□ -0.51
DDX41-213ENST00000512027 PSG9Q00887 426 aa11.89□□□□□ -0.51
DDX41-213ENST00000512027 NHLH2Q02577 135 aa11.89□□□□□ -0.51
DDX41-213ENST00000512027 SAMD13Q5VXD3 122 aa11.89□□□□□ -0.51
DDX41-213ENST00000512027 ZNF767PQ75MW2 155 aa11.89□□□□□ -0.51
DDX41-213ENST00000512027 STX12Q86Y82 276 aa11.89□□□□□ -0.51
DDX41-213ENST00000512027 A0A087X0K7 114 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 TRAV5A0A0B4J249 113 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 LY6G6CO95867 125 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 FGF7P21781 194 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 CNN1P51911 297 aaKnown RBP11.88□□□□□ -0.51
DDX41-213ENST00000512027 H2BFSP57053 126 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 PRR20EP86478 221 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 PRR20CP86479 221 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 PRR20DP86480 221 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 PRR20BP86481 221 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 PRR20AP86496 221 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 OPCMLQ14982 345 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 PXDC1Q5TGL8 231 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 C10orf113Q5VZT2 155 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 AMTNQ6UX39 209 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 ZNF705AQ6ZN79 300 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms