RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 GATA4P43694 442 aa7.33□□□□□ -1.24
NEK1-207ENST00000511633 C9orf139Q6ZV77 190 aa7.33□□□□□ -1.24
NEK1-207ENST00000511633 BEND2Q8NDZ0 799 aa7.33□□□□□ -1.24
NEK1-207ENST00000511633 TRAV8-1A0A0A6YYK1 113 aa7.33□□□□□ -1.24
NEK1-207ENST00000511633 K7EM74 188 aa7.33□□□□□ -1.24
NEK1-207ENST00000511633 APOMO95445 188 aa7.33□□□□□ -1.24
NEK1-207ENST00000511633 LYZL1Q6UWQ5 148 aa7.33□□□□□ -1.24
NEK1-207ENST00000511633 UBE2E2Q96LR5 201 aa7.33□□□□□ -1.24
NEK1-207ENST00000511633 TRGV1A0A0A0MS02 117 aa7.33□□□□□ -1.24
NEK1-207ENST00000511633 SH2D1AO60880 128 aa7.33□□□□□ -1.24
NEK1-207ENST00000511633 Q71RC1 249 aaPredicted RBP7.33□□□□□ -1.24
NEK1-207ENST00000511633 NIT1Q86X76 327 aa7.33□□□□□ -1.24
NEK1-207ENST00000511633 PARD6GQ9BYG4 376 aaPredicted RBP7.33□□□□□ -1.24
NEK1-207ENST00000511633 NXT2Q9NPJ8 142 aaKnown RBP7.33□□□□□ -1.24
NEK1-207ENST00000511633 IGHV1-69DA0A0B4J2H0 117 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 IGHV1-69P01742 117 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 TCF15Q12870 199 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 VOPP1Q96AW1 172 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 TRAV1-1A0A0B4J248 108 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 IGHV2-70DA0A0C4DH43 119 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 PPBPP02775 128 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 LMO1P25800 156 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 COTL1Q14019 142 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 OR9G4Q8NGQ1 327 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 PRDM13Q9H4Q3 707 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 CRPP02741 224 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 CXCL1P09341 107 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 CMC4P56277 68 aaPredicted RBP7.32□□□□□ -1.24
NEK1-207ENST00000511633 PSG3Q16557 428 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 IGHV3-64A0A075B6Q5 118 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 HIST1H2BKO60814 126 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 HIST1H2BJP06899 126 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 HIST1H2BOP23527 126 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 LOXP28300 417 aaPredicted RBP7.32□□□□□ -1.24
NEK1-207ENST00000511633 HIST1H2BBP33778 126 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 HIST1H2BDP58876 126 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 HIST1H2BCP62807 126 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 ERCC8Q13216 396 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 HIST2H2BEQ16778 126 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 C17orf58Q2M2W7 97 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 ORMDL2Q53FV1 153 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.32□□□□□ -1.24
NEK1-207ENST00000511633 LINC01551Q86U37 167 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 HIST1H2BHQ93079 126 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 HIST1H2BNQ99877 126 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 HIST1H2BMQ99879 126 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 ROS1P08922 2347 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 DIDO1Q9BTC0 2240 aaKnown RBP7.32□□□□□ -1.24
NEK1-207ENST00000511633 J3QKU1 62 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 FOXL1Q12952 345 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 TMEM249Q2WGJ8 235 aa7.32□□□□□ -1.24
NEK1-207ENST00000511633 D6R8Y8 96 aa7.31□□□□□ -1.24
NEK1-207ENST00000511633 G3V318 75 aa7.31□□□□□ -1.24
NEK1-207ENST00000511633 IGLV1-44P01699 117 aa7.31□□□□□ -1.24
NEK1-207ENST00000511633 DAZ1Q9NQZ3 744 aaKnown RBP7.31□□□□□ -1.24
NEK1-207ENST00000511633 ADARB2-AS1A8MUL3 147 aa7.31□□□□□ -1.24
NEK1-207ENST00000511633 GATA3P23771 443 aa7.31□□□□□ -1.24
NEK1-207ENST00000511633 ZNF562Q6V9R5 426 aa7.31□□□□□ -1.24
NEK1-207ENST00000511633 ATP5L2Q7Z4Y8 100 aa7.31□□□□□ -1.24
NEK1-207ENST00000511633 CHTOPQ9Y3Y2 248 aaKnown RBP7.31□□□□□ -1.24
NEK1-207ENST00000511633 TRBV7-9A0A0J9YWB2 115 aa7.31□□□□□ -1.24
NEK1-207ENST00000511633 RSPO1Q2MKA7 263 aaPredicted RBP7.31□□□□□ -1.24
NEK1-207ENST00000511633 SPTBN1Q01082 2364 aaKnown RBP7.31□□□□□ -1.24
NEK1-207ENST00000511633 KIAA2026Q5HYC2 2103 aa7.31□□□□□ -1.24
NEK1-207ENST00000511633 ITGB1BP1O14713 200 aa7.31□□□□□ -1.24
NEK1-207ENST00000511633 GRNP28799 593 aaKnown RBP7.31□□□□□ -1.24
NEK1-207ENST00000511633 CFHR2P36980 270 aa7.31□□□□□ -1.24
NEK1-207ENST00000511633 DPM2O94777 84 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 ZNF833PQ6ZTB9 187 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 C3orf56Q8N813 242 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 LINC00477Q96M19 166 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 C1orf147Q96MC9 270 aaPredicted RBP7.3□□□□□ -1.24
NEK1-207ENST00000511633 PRADC1Q9BSG0 188 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 ZNF407Q9C0G0 2248 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 A0A1B0GV90 55 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 NDUFB8O95169 186 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 LRRK1Q38SD2 2015 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 RNF182Q8N6D2 247 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 C11orf68Q9H3H3 251 aaKnown RBP7.3□□□□□ -1.24
NEK1-207ENST00000511633 IGLV3-9A0A075B6K5 115 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 A0A0U1RRA0 63 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 CFPP27918 469 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 CR1LQ2VPA4 569 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 IL17RELQ6ZVW7 336 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 FAM110DQ8TAY7 271 aaPredicted RBP7.3□□□□□ -1.24
NEK1-207ENST00000511633 RNF166Q96A37 237 aaPredicted RBP7.3□□□□□ -1.24
NEK1-207ENST00000511633 SHANK2-AS3Q9BTD1 123 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 RNF114Q9Y508 228 aa7.3□□□□□ -1.24
NEK1-207ENST00000511633 NUP210Q8TEM1 1887 aaPredicted RBP7.3□□□□□ -1.24
NEK1-207ENST00000511633 LAGE3Q14657 143 aa7.29□□□□□ -1.24
NEK1-207ENST00000511633 ZNF876PQ49A33 203 aa7.29□□□□□ -1.24
NEK1-207ENST00000511633 SRSF8Q9BRL6 282 aaKnown RBP7.29□□□□□ -1.24
NEK1-207ENST00000511633 A0A1B0GW64 132 aa7.29□□□□□ -1.24
NEK1-207ENST00000511633 INSP01308 110 aa7.29□□□□□ -1.24
NEK1-207ENST00000511633 TEX36Q5VZQ5 186 aa7.29□□□□□ -1.24
NEK1-207ENST00000511633 DTX2Q86UW9 622 aa7.29□□□□□ -1.24
NEK1-207ENST00000511633 UBE2DNLQ8IWF7 75 aa7.29□□□□□ -1.24
NEK1-207ENST00000511633 LINC00479Q96M42 142 aa7.29□□□□□ -1.24
NEK1-207ENST00000511633 VGLL1Q99990 258 aa7.29□□□□□ -1.24
NEK1-207ENST00000511633 TMEM14BQ9NUH8 114 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms