RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 ATP5G3P48201 142 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 BLOC1S1P78537 153 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 C4orf3Q8WVX3 66 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 TXN2Q99757 166 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 OR51M1Q9H341 326 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 MRPL27Q9P0M9 148 aaKnown RBP6.14□□□□□ -1.43
SMAD1-209ENST00000511125 SUMO1P63165 101 aaKnown RBP6.14□□□□□ -1.43
SMAD1-209ENST00000511125 GNG5P63218 68 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 C12orf54Q6X4T0 127 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 LINC00052Q96N35 136 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 PFDN5Q99471 154 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 KCNIP2Q9NS61 270 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 TECRQ9NZ01 308 aaKnown RBP6.14□□□□□ -1.43
SMAD1-209ENST00000511125 NOTCH1P46531 2555 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 ADARB2-AS1A8MUL3 147 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 ZNF705FA8MVS1 300 aaPredicted RBP6.14□□□□□ -1.43
SMAD1-209ENST00000511125 C9JQL5 133 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 SLC17A3O00476 420 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 FOLR2P14207 255 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 GCHFRP30047 84 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 PPT1P50897 306 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 ZNF674Q2M3X9 581 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 FAM167A-AS1Q96KT0 104 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 PARD6GQ9BYG4 376 aaPredicted RBP6.14□□□□□ -1.43
SMAD1-209ENST00000511125 GAR1Q9NY12 217 aaKnown RBP6.14□□□□□ -1.43
SMAD1-209ENST00000511125 PFDN2Q9UHV9 154 aa6.14□□□□□ -1.43
SMAD1-209ENST00000511125 ELOA3CA0A087WX78 387 aaPredicted RBP6.13□□□□□ -1.43
SMAD1-209ENST00000511125 M0R3E3 92 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 RGS13O14921 159 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 SAP30O75446 220 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 CLLU1Q5K131 121 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 LINC00479Q96M42 142 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 OR4F4Q96R69 305 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 DAZ1Q9NQZ3 744 aaKnown RBP6.13□□□□□ -1.43
SMAD1-209ENST00000511125 YTHDF2Q9Y5A9 579 aaKnown RBP6.13□□□□□ -1.43
SMAD1-209ENST00000511125 TMEM213A2RRL7 107 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 NDUFA4O00483 81 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 STAG3L2P0CL84 134 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 STAG3L3P0CL85 134 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 CBLN1P23435 193 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 GUCA2BQ16661 112 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 COMMD1Q8N668 190 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 TMEM190Q8WZ59 177 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 SHANK2-AS3Q9BTD1 123 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 ZNF586Q9NXT0 402 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 AGRNO00468 2067 aa6.13□□□□□ -1.43
SMAD1-209ENST00000511125 IZUMO1RA6ND01 250 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 J3KRW8 73 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 BUB3O43684 328 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 IGKV3-20P01619 116 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 NBEAP1P0C6P0 100 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 CD33P20138 364 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 RAB5CP51148 216 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 MYOZ3Q8TDC0 251 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 WIPF2Q8TF74 440 aaPredicted RBP6.12□□□□□ -1.43
SMAD1-209ENST00000511125 SMAD5-AS1Q9Y6J3 95 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 TRAV34A0A0B4J273 112 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 PGPA6NDG6 321 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 C2orf70A6NJV1 201 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 H3BRN7 92 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 CXorf1O96002 111 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 ZP3P21754 424 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 TAS2R45P59539 299 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 GUK1Q16774 197 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 FAM209BQ5JX69 171 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 ADAMTSL5Q6ZMM2 481 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 TCF24Q7RTU0 167 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 BPIFA4PQ86YQ2 179 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 DYNLRB2Q8TF09 96 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 GLMPQ8WWB7 406 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 MARC2Q969Z3 335 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 OVOL1O14753 267 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 ATF4P18848 351 aaPredicted RBP6.12□□□□□ -1.43
SMAD1-209ENST00000511125 ICAM4Q14773 271 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 ZNF124Q15973 351 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 OR4F17Q8NGA8 305 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 OR9G4Q8NGQ1 327 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 RPUSD4Q96CM3 377 aaKnown RBP6.12□□□□□ -1.43
SMAD1-209ENST00000511125 MLXQ9UH92 298 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 ZNF580Q9UK33 172 aa6.12□□□□□ -1.43
SMAD1-209ENST00000511125 IGHV7-4-1A0A0J9YVY3 117 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 RBFOX3A6NFN3 312 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 F6UB75 175 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 DNASE2O00115 360 aaPredicted RBP6.11□□□□□ -1.43
SMAD1-209ENST00000511125 CHEK1O14757 476 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 KLF5Q13887 457 aaPredicted RBP6.11□□□□□ -1.43
SMAD1-209ENST00000511125 KHDC3LQ587J8 217 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 SIGLEC15Q6ZMC9 328 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 RNF152Q8N8N0 203 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 NHLRC2Q8NBF2 726 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 FXYD5Q96DB9 178 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 SAT2Q96F10 170 aaPredicted RBP6.11□□□□□ -1.43
SMAD1-209ENST00000511125 DERL1Q9BUN8 251 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 SMPXQ9UHP9 88 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 MGAM2Q2M2H8 2515 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 TRAV8-1A0A0A6YYK1 113 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 TMEM89A2RUT3 159 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 PGPEP1LA6NFU8 196 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 SEC14L6B5MCN3 397 aa6.11□□□□□ -1.43
SMAD1-209ENST00000511125 C11orf94C9JXX5 98 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms