RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 AKAIN1P0CW23 69 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 HLA-EP13747 358 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 CRHBPP24387 322 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 FKBP2P26885 142 aaKnown RBP2.45□□□□□ -2.02
NUP54-209ENST00000510569 DYNLT1P63172 113 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 RBMY1FQ15415 496 aaKnown RBP2.45□□□□□ -2.02
NUP54-209ENST00000510569 GUCA2BQ16661 112 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 RSPO1Q2MKA7 263 aaPredicted RBP2.45□□□□□ -2.02
NUP54-209ENST00000510569 LINC00303Q3SY05 128 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 ORMDL2Q53FV1 153 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 CASC10Q5T4H9 136 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 TMEM14EPQ6UXP3 125 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 LINC00299Q6ZSB3 139 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 RFLNAQ6ZTI6 216 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 GTF2H5Q6ZYL4 71 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 WDR86Q86TI4 376 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 LRP11Q86VZ4 500 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 DEFB107AQ8IZN7 70 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 BORCS8Q96FH0 119 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 CARD19Q96LW7 228 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 C18orf15Q96N68 181 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 GPX7Q96SL4 187 aaPredicted RBP2.45□□□□□ -2.02
NUP54-209ENST00000510569 SPIN2AQ99865 258 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 SPIN2BQ9BPZ2 258 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 MRPL57Q9BQC6 102 aaKnown RBP2.45□□□□□ -2.02
NUP54-209ENST00000510569 TM2D3Q9BRN9 247 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 PLA2G2FQ9BZM2 168 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 ZNF436Q9C0F3 470 aaPredicted RBP2.45□□□□□ -2.02
NUP54-209ENST00000510569 WDR61Q9GZS3 305 aaKnown RBP2.45□□□□□ -2.02
NUP54-209ENST00000510569 AICDAQ9GZX7 198 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 TMEM191AQ9H0A3 160 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 RERGLQ9H628 205 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 MARCOQ9UEW3 520 aaPredicted RBP2.45□□□□□ -2.02
NUP54-209ENST00000510569 NAT8Q9UHE5 227 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 PCTPQ9UKL6 214 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 HSPE1-MOB4S4R3N1 261 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 GPR179Q6PRD1 2367 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 DYSFO75923 2080 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 ANKRD12Q6UB98 2062 aa2.45□□□□□ -2.02
NUP54-209ENST00000510569 MKI67P46013 3256 aaKnown RBP2.44□□□□□ -2.02
NUP54-209ENST00000510569 ANAPC1Q9H1A4 1944 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 MICAL3Q7RTP6 2002 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 TRAV9-1A0A075B6T8 112 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 LOC107984640A0A0U1RRK4 108 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 LOC100130705A0A1B0GUX0 176 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 IRGMA1A4Y4 181 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 BBIP1A8MTZ0 92 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 A8MUN3 132 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 IGLL5B9A064 214 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 ZNF670-ZNF695F2Z2N8 137 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 UBFD1O14562 309 aaKnown RBP2.44□□□□□ -2.02
NUP54-209ENST00000510569 CDC42EP2O14613 210 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 TRGC2P03986 189 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 MAS1P04201 325 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 IGLC6P0CF74 106 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 LINC00694P0DN24 101 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 BRS3P32247 399 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 TMBIM6P55061 237 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 LINC00313P59037 77 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 GABARAPL2P60520 117 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 BTG2P78543 158 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 MEF2BQ02080 365 aaPredicted RBP2.44□□□□□ -2.02
NUP54-209ENST00000510569 REG3AQ06141 175 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 MSMO1Q15800 293 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 ZNF141Q15928 474 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 TMEM241Q24JQ0 296 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 MRPL2Q5T653 305 aaKnown RBP2.44□□□□□ -2.02
NUP54-209ENST00000510569 MSRB3Q8IXL7 192 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 ZNF709Q8N972 641 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 OR2M3Q8NG83 312 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 LCN9Q8WX39 176 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 TOMM6Q96B49 74 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 ABHD14BQ96IU4 210 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 TEX37Q96LM6 180 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 ERMAPQ96PL5 475 aaPredicted RBP2.44□□□□□ -2.02
NUP54-209ENST00000510569 OR4C12Q96R67 309 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 SPANXDQ9BXN6 97 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 C11orf68Q9H3H3 251 aaKnown RBP2.44□□□□□ -2.02
NUP54-209ENST00000510569 Q9H521 79 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 PLXNB3Q9ULL4 1909 aa2.44□□□□□ -2.02
NUP54-209ENST00000510569 NUP210Q8TEM1 1887 aaPredicted RBP2.43□□□□□ -2.02
NUP54-209ENST00000510569 SZT2Q5T011 3432 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 DENND4CQ5VZ89 1909 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 DOCK6Q96HP0 2047 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 TRBV20OR9-2A0A075B6H5 130 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 LOC102724200A0A096LPH7 203 aaPredicted RBP2.43□□□□□ -2.02
NUP54-209ENST00000510569 SPAARA0A1B0GVQ0 90 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 LOC285095A0A1B0GVY8 99 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 ZNF705GA8MUZ8 300 aaPredicted RBP2.43□□□□□ -2.02
NUP54-209ENST00000510569 C9JQL5 133 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 I3L521 148 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 COX7A2LO14548 114 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 UBE2L6O14933 153 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 HCRTO43612 131 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 SCO1O75880 301 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 IGLV2-8P01709 118 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 HLA-DQB1P01920 261 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 MT-ND4LP03901 98 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 CRYGSP22914 178 aa2.43□□□□□ -2.02
NUP54-209ENST00000510569 PSMB8P28062 276 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms