RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 ARL6Q9H0F7 186 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 ARV1Q9H2C2 271 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 ALG5Q9Y673 324 aa8.59□□□□□ -1.03
HMGXB3-203ENST00000510472 OR5G3P0C626 314 aa8.58□□□□□ -1.04
HMGXB3-203ENST00000510472 CXCL3P19876 107 aa8.58□□□□□ -1.04
HMGXB3-203ENST00000510472 GALR1P47211 349 aa8.58□□□□□ -1.04
HMGXB3-203ENST00000510472 RPL29P47914 159 aaKnown RBP8.58□□□□□ -1.04
HMGXB3-203ENST00000510472 CAMLGP49069 296 aa8.58□□□□□ -1.04
HMGXB3-203ENST00000510472 MEOX2P50222 304 aa8.58□□□□□ -1.04
HMGXB3-203ENST00000510472 LRRC37A5PQ49AS3 106 aa8.58□□□□□ -1.04
HMGXB3-203ENST00000510472 ACTL10Q5JWF8 245 aa8.58□□□□□ -1.04
HMGXB3-203ENST00000510472 CASC10Q5T4H9 136 aa8.58□□□□□ -1.04
HMGXB3-203ENST00000510472 SAMD13Q5VXD3 122 aa8.58□□□□□ -1.04
HMGXB3-203ENST00000510472 CSNK1G2-AS1Q8NCQ2 148 aa8.58□□□□□ -1.04
HMGXB3-203ENST00000510472 GATAD1Q8WUU5 269 aa8.58□□□□□ -1.04
HMGXB3-203ENST00000510472 CLUHP3Q96NS8 147 aa8.58□□□□□ -1.04
HMGXB3-203ENST00000510472 SLC25A31Q9H0C2 315 aa8.58□□□□□ -1.04
HMGXB3-203ENST00000510472 SLC25A22Q9H936 323 aa8.58□□□□□ -1.04
HMGXB3-203ENST00000510472 ELOA3CA0A087WX78 387 aaPredicted RBP8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 A0A087X0K7 114 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 TRAV8-2A0A0B4J237 113 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 SPP1P10451 314 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 LYL1P12980 280 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 HLA-DRB4P13762 266 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 RPL7P18124 248 aaKnown RBP8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 ATF4P18848 351 aaPredicted RBP8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 C4BPBP20851 252 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 ID1P41134 155 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 DEFB1P60022 68 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 BAXQ07812 192 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 RAB31Q13636 194 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 OPCMLQ14982 345 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 GDF5OSQ5U4N7 250 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 MORN5Q5VZ52 161 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 MIC13Q5XKP0 118 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 MORN3Q6PF18 240 aaPredicted RBP8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 C20orf173Q96LM9 149 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 DNAJC4Q9NNZ3 241 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 HLA-DRB4X5D2U9 266 aa8.57□□□□□ -1.04
HMGXB3-203ENST00000510472 RYR3Q15413 4870 aa8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 UBE2L5PA0A1B0GUS4 154 aa8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 A8MTW9 85 aa8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 MPDU1O75352 247 aa8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 CA1P00915 261 aaPredicted RBP8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 OXA1LQ15070 435 aa8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 FCN2Q15485 313 aa8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 TMEM41BQ5BJD5 291 aa8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 FOXI2Q6ZQN5 318 aa8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 LINC00305Q7Z4B0 112 aa8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 S100A7AQ86SG5 101 aa8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 OR11H7Q8NGC8 314 aa8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 OR5C1Q8NGR4 320 aa8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 LINC00052Q96N35 136 aa8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 SAV1Q9H4B6 383 aaPredicted RBP8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 SLC39A9Q9NUM3 307 aa8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 AGRNO00468 2067 aa8.56□□□□□ -1.04
HMGXB3-203ENST00000510472 STARD9Q9P2P6 4700 aa8.55□□□□□ -1.04
HMGXB3-203ENST00000510472 FGF7P21781 194 aa8.55□□□□□ -1.04
HMGXB3-203ENST00000510472 B2MP61769 119 aa8.55□□□□□ -1.04
HMGXB3-203ENST00000510472 C10orf113Q5VZT2 155 aa8.55□□□□□ -1.04
HMGXB3-203ENST00000510472 SPATA31B1PQ5VZV4 182 aa8.55□□□□□ -1.04
HMGXB3-203ENST00000510472 Q6ZRG5 221 aa8.55□□□□□ -1.04
HMGXB3-203ENST00000510472 C16orf92Q96LL3 132 aa8.55□□□□□ -1.04
HMGXB3-203ENST00000510472 NPCDR1Q9BY65 106 aa8.55□□□□□ -1.04
HMGXB3-203ENST00000510472 MBD2Q9UBB5 411 aa8.55□□□□□ -1.04
HMGXB3-203ENST00000510472 RNF24Q9Y225 148 aa8.55□□□□□ -1.04
HMGXB3-203ENST00000510472 A0A0J9YWU9 116 aa8.54□□□□□ -1.04
HMGXB3-203ENST00000510472 A0A0J9YX75 114 aa8.54□□□□□ -1.04
HMGXB3-203ENST00000510472 ZNF705EA8MWA4 302 aaPredicted RBP8.54□□□□□ -1.04
HMGXB3-203ENST00000510472 COX7A2P2O60397 106 aa8.54□□□□□ -1.04
HMGXB3-203ENST00000510472 PET100P0DJ07 73 aa8.54□□□□□ -1.04
HMGXB3-203ENST00000510472 RGS21Q2M5E4 152 aa8.54□□□□□ -1.04
HMGXB3-203ENST00000510472 ZNF709Q8N972 641 aa8.54□□□□□ -1.04
HMGXB3-203ENST00000510472 OR11H2Q8NH07 326 aa8.54□□□□□ -1.04
HMGXB3-203ENST00000510472 IL17DQ8TAD2 202 aa8.54□□□□□ -1.04
HMGXB3-203ENST00000510472 RARRES2Q99969 163 aa8.54□□□□□ -1.04
HMGXB3-203ENST00000510472 WDR61Q9GZS3 305 aaKnown RBP8.54□□□□□ -1.04
HMGXB3-203ENST00000510472 HSPB11Q9Y547 144 aa8.54□□□□□ -1.04
HMGXB3-203ENST00000510472 PXMP4Q9Y6I8 212 aa8.54□□□□□ -1.04
HMGXB3-203ENST00000510472 TRAV5A0A0B4J249 113 aa8.53□□□□□ -1.04
HMGXB3-203ENST00000510472 F6UB75 175 aa8.53□□□□□ -1.04
HMGXB3-203ENST00000510472 IGLC2P0DOY2 106 aa8.53□□□□□ -1.04
HMGXB3-203ENST00000510472 RPL12P30050 165 aaKnown RBP8.53□□□□□ -1.04
HMGXB3-203ENST00000510472 CLINT1Q14677 625 aa8.53□□□□□ -1.04
HMGXB3-203ENST00000510472 Q5BKY6 102 aa8.53□□□□□ -1.04
HMGXB3-203ENST00000510472 IGFL4Q6B9Z1 124 aa8.53□□□□□ -1.04
HMGXB3-203ENST00000510472 AMTNQ6UX39 209 aa8.53□□□□□ -1.04
HMGXB3-203ENST00000510472 OR1L4Q8NGR5 311 aa8.53□□□□□ -1.04
HMGXB3-203ENST00000510472 THAP6Q8TBB0 222 aa8.53□□□□□ -1.04
HMGXB3-203ENST00000510472 SAT2Q96F10 170 aaPredicted RBP8.53□□□□□ -1.04
HMGXB3-203ENST00000510472 MED28Q9H204 178 aa8.53□□□□□ -1.04
HMGXB3-203ENST00000510472 RPRMQ9NS64 109 aa8.53□□□□□ -1.04
HMGXB3-203ENST00000510472 X6R8D5 127 aa8.53□□□□□ -1.04
HMGXB3-203ENST00000510472 DYNC2H1Q8NCM8 4307 aaKnown RBP8.53□□□□□ -1.04
HMGXB3-203ENST00000510472 CSMD3Q7Z407 3707 aa8.52□□□□□ -1.05
HMGXB3-203ENST00000510472 SACSQ9NZJ4 4579 aa8.52□□□□□ -1.05
HMGXB3-203ENST00000510472 H3BQ15 152 aa8.52□□□□□ -1.05
HMGXB3-203ENST00000510472 CXCL2P19875 107 aa8.52□□□□□ -1.05
HMGXB3-203ENST00000510472 NUTF2P61970 127 aaKnown RBP8.52□□□□□ -1.05
HMGXB3-203ENST00000510472 GCSAMLQ5JQS6 135 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms