RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 WFDC8Q8IUA0 241 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 DMRTC2Q8IXT2 367 aaPredicted RBP2.93□□□□□ -1.94
USP53-205ENST00000509769 RFESDQ8TAC1 157 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 A0A0G2JNJ9 132 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 SHISA8B8ZZ34 492 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 M0R1B8 84 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 CRYGBP07316 175 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 CTSBP07858 339 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 CD33P20138 364 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 RPL18AQ02543 176 aaKnown RBP2.93□□□□□ -1.94
USP53-205ENST00000509769 C16orf54Q6UWD8 224 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 C1QL2Q7Z5L3 287 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 ZPLD1Q8TCW7 415 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 SMIM2Q9BVW6 85 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 LIME1Q9H400 295 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 Q9UFV3 132 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 LINC00527Q9UJ94 153 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 UBE2D4Q9Y2X8 147 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 IGLV1-36A0A0B4J1U3 117 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 PRIMA1Q86XR5 153 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 DAND5Q8N907 189 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 WNT2BQ93097 391 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 C1orf159Q96HA4 380 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 JMJD8Q96S16 334 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 PIEZO1Q92508 2521 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 IGKV1D-42A0A075B6H8 117 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 TRBV12-3P01733 135 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 PEBP1P30086 187 aaKnown RBP2.93□□□□□ -1.94
USP53-205ENST00000509769 PFN2P35080 140 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 DEFB103AP81534 67 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 ALKAL1Q6UXT8 129 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 ZFP2Q6ZN57 461 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 SLC25A29Q8N8R3 303 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 CCL4L1Q8NHW4 92 aa2.93□□□□□ -1.94
USP53-205ENST00000509769 RNASE7Q9H1E1 156 aaKnown RBP2.93□□□□□ -1.94
USP53-205ENST00000509769 PLXNB2O15031 1838 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 PIN1P1O15428 100 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 ADCYAP1P18509 176 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 CD27P26842 260 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 CR1LQ2VPA4 569 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 DEFB110Q30KQ9 67 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 Q6P435 159 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 MIR17HGQ75NE6 70 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 C5orf38Q86SI9 138 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 SLC25A45Q8N413 288 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 TMEM14CQ9P0S9 112 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 CSDC2Q9Y534 153 aaKnown RBP2.92□□□□□ -1.94
USP53-205ENST00000509769 LENEPQ9Y5L5 61 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 PKD1L2Q7Z442 2459 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 J3QQQ9 107 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 CFHR2P36980 270 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 SRSF3P84103 164 aaKnown RBP2.92□□□□□ -1.94
USP53-205ENST00000509769 SUMO4Q6EEV6 95 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 THAP8Q8NA92 274 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 C21orf62Q9NYP8 219 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 ICOSQ9Y6W8 199 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 A0A087WV48 116 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 TMEM229AB2RXF0 380 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 H0YJW9 148 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 I3L3M4 83 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 NDUFB8O95169 186 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 ZNF138P52744 262 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 RPL15P61313 204 aaKnown RBP2.92□□□□□ -1.94
USP53-205ENST00000509769 MRPL51Q4U2R6 128 aaKnown RBP2.92□□□□□ -1.94
USP53-205ENST00000509769 TMEM196Q5HYL7 178 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 Q6JHZ5 121 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 MRPL53Q96EL3 112 aaKnown RBP2.92□□□□□ -1.94
USP53-205ENST00000509769 CUL9Q8IWT3 2517 aa2.92□□□□□ -1.94
USP53-205ENST00000509769 TRBV19A0A075B6N1 114 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 A0A0A6YYD4 124 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 TRGV5A0A0B4J1U4 118 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 TIMM17BO60830 172 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 WISP3O95389 354 aaPredicted RBP2.91□□□□□ -1.94
USP53-205ENST00000509769 BLCAPP62952 87 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 MST1LQ2TV78 715 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 PIGYQ3MUY2 71 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 SPINK9Q5DT21 86 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 CXorf67Q86X51 503 aaPredicted RBP2.91□□□□□ -1.94
USP53-205ENST00000509769 ZNF843Q8N446 348 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 Q8NFD4 153 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 ZNF747Q9BV97 191 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 ARRDC1-AS1Q9H2J1 176 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 DAZ1Q9NQZ3 744 aaKnown RBP2.91□□□□□ -1.94
USP53-205ENST00000509769 SELENOKQ9Y6D0 94 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 MUC6Q6W4X9 2439 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 TRBV6-1A0A0K0K1D8 114 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.91□□□□□ -1.94
USP53-205ENST00000509769 A0A1W2PNR3 127 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 SAA1P0DJI8 122 aaPredicted RBP2.91□□□□□ -1.94
USP53-205ENST00000509769 TFF3Q07654 80 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 PDCD1Q15116 288 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 Q86TA4 180 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 LYZL4Q96KX0 146 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 FANCD2OSQ96PS1 177 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 PRR13Q9NZ81 148 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 TOMM7Q9P0U1 55 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 NDUFA12Q9UI09 145 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 DEFB108AA8MXU0 73 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 LINC01565O15544 149 aa2.91□□□□□ -1.94
USP53-205ENST00000509769 SAP30O75446 220 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms