RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 C7orf66A4D0T2 115 aa12.88□□□□□ -0.35
TPM3-220ENST00000509601 ZNF705FA8MVS1 300 aaPredicted RBP12.88□□□□□ -0.35
TPM3-220ENST00000509601 IGLL5B9A064 214 aa12.88□□□□□ -0.35
TPM3-220ENST00000509601 FNDC10F2Z333 226 aa12.88□□□□□ -0.35
TPM3-220ENST00000509601 H3BRN7 92 aa12.88□□□□□ -0.35
TPM3-220ENST00000509601 TSC22D2O75157 780 aa12.88□□□□□ -0.35
TPM3-220ENST00000509601 DEDDO75618 318 aa12.88□□□□□ -0.35
TPM3-220ENST00000509601 ZNF705DP0CH99 300 aaPredicted RBP12.88□□□□□ -0.35
TPM3-220ENST00000509601 ZNF705BP0CI00 300 aaPredicted RBP12.88□□□□□ -0.35
TPM3-220ENST00000509601 PSG9Q00887 426 aa12.88□□□□□ -0.35
TPM3-220ENST00000509601 SAMD13Q5VXD3 122 aa12.88□□□□□ -0.35
TPM3-220ENST00000509601 IGFL4Q6B9Z1 124 aa12.88□□□□□ -0.35
TPM3-220ENST00000509601 PATE2Q6UY27 113 aa12.88□□□□□ -0.35
TPM3-220ENST00000509601 SHANK2-AS3Q9BTD1 123 aa12.88□□□□□ -0.35
TPM3-220ENST00000509601 SCRT1Q9BWW7 348 aa12.88□□□□□ -0.35
TPM3-220ENST00000509601 TRAV6A0A075B6T7 132 aa12.87□□□□□ -0.35
TPM3-220ENST00000509601 A8MTW9 85 aa12.87□□□□□ -0.35
TPM3-220ENST00000509601 CCSO14618 274 aa12.87□□□□□ -0.35
TPM3-220ENST00000509601 HYPMO75409 117 aa12.87□□□□□ -0.35
TPM3-220ENST00000509601 PRR20EP86478 221 aa12.87□□□□□ -0.35
TPM3-220ENST00000509601 PRR20CP86479 221 aa12.87□□□□□ -0.35
TPM3-220ENST00000509601 PRR20DP86480 221 aa12.87□□□□□ -0.35
TPM3-220ENST00000509601 PRR20BP86481 221 aa12.87□□□□□ -0.35
TPM3-220ENST00000509601 PRR20AP86496 221 aa12.87□□□□□ -0.35
TPM3-220ENST00000509601 EBLN2Q6P2I7 272 aa12.87□□□□□ -0.35
TPM3-220ENST00000509601 ZNF767PQ75MW2 155 aa12.87□□□□□ -0.35
TPM3-220ENST00000509601 OR10P1Q8NGE3 313 aa12.87□□□□□ -0.35
TPM3-220ENST00000509601 GPR82Q96P67 336 aa12.87□□□□□ -0.35
TPM3-220ENST00000509601 RPRMQ9NS64 109 aa12.87□□□□□ -0.35
TPM3-220ENST00000509601 TRAV10A0A0B4J240 114 aa12.86□□□□□ -0.35
TPM3-220ENST00000509601 SMIM9A6NGZ8 99 aa12.86□□□□□ -0.35
TPM3-220ENST00000509601 K7EPK0 472 aa12.86□□□□□ -0.35
TPM3-220ENST00000509601 SELENOTP62341 195 aa12.86□□□□□ -0.35
TPM3-220ENST00000509601 C1orf158Q8N1D5 194 aa12.86□□□□□ -0.35
TPM3-220ENST00000509601 SEC22CQ9BRL7 303 aa12.86□□□□□ -0.35
TPM3-220ENST00000509601 HIGD1AQ9Y241 93 aa12.86□□□□□ -0.35
TPM3-220ENST00000509601 LINC00869P0C866 280 aa12.85□□□□□ -0.35
TPM3-220ENST00000509601 S100A7P31151 101 aa12.85□□□□□ -0.35
TPM3-220ENST00000509601 RAP2BP61225 183 aa12.85□□□□□ -0.35
TPM3-220ENST00000509601 TEPPQ6URK8 271 aa12.85□□□□□ -0.35
TPM3-220ENST00000509601 AMTNQ6UX39 209 aa12.85□□□□□ -0.35
TPM3-220ENST00000509601 ZNF431Q8TF32 576 aaPredicted RBP12.85□□□□□ -0.35
TPM3-220ENST00000509601 UHRF2Q96PU4 802 aa12.85□□□□□ -0.35
TPM3-220ENST00000509601 CCDC32Q9BV29 185 aa12.85□□□□□ -0.35
TPM3-220ENST00000509601 C11orf1Q9H5F2 150 aa12.85□□□□□ -0.35
TPM3-220ENST00000509601 IGHV3OR16-12A0A075B7B8 117 aa12.84□□□□□ -0.35
TPM3-220ENST00000509601 MRPS12O15235 138 aaKnown RBP12.84□□□□□ -0.35
TPM3-220ENST00000509601 OR5G3P0C626 314 aa12.84□□□□□ -0.35
TPM3-220ENST00000509601 SLC38A11Q08AI6 406 aa12.84□□□□□ -0.35
TPM3-220ENST00000509601 C12orf45Q8N5I9 185 aaPredicted RBP12.84□□□□□ -0.35
TPM3-220ENST00000509601 GGACTQ9BVM4 153 aa12.84□□□□□ -0.35
TPM3-220ENST00000509601 ARL6Q9H0F7 186 aa12.84□□□□□ -0.35
TPM3-220ENST00000509601 NUDT15Q9NV35 164 aa12.84□□□□□ -0.35
TPM3-220ENST00000509601 MGAT4CQ9UBM8 478 aa12.84□□□□□ -0.35
TPM3-220ENST00000509601 H2AFB2P0C5Z0 115 aa12.83□□□□□ -0.36
TPM3-220ENST00000509601 RPL7P18124 248 aaKnown RBP12.83□□□□□ -0.36
TPM3-220ENST00000509601 IL15RAQ13261 267 aa12.83□□□□□ -0.36
TPM3-220ENST00000509601 LINC00299Q6ZSB3 139 aa12.83□□□□□ -0.36
TPM3-220ENST00000509601 RNF182Q8N6D2 247 aa12.83□□□□□ -0.36
TPM3-220ENST00000509601 FAT2Q9NYQ8 4349 aa12.83□□□□□ -0.36
TPM3-220ENST00000509601 IGHV4-4A0A075B6R2 117 aa12.82□□□□□ -0.36
TPM3-220ENST00000509601 DEFB131BA0A096LNP1 70 aa12.82□□□□□ -0.36
TPM3-220ENST00000509601 FAM25EA8MYX2 175 aa12.82□□□□□ -0.36
TPM3-220ENST00000509601 AGPAT2O15120 278 aa12.82□□□□□ -0.36
TPM3-220ENST00000509601 CNN1P51911 297 aaKnown RBP12.82□□□□□ -0.36
TPM3-220ENST00000509601 FGL1Q08830 312 aa12.82□□□□□ -0.36
TPM3-220ENST00000509601 C2orf50Q96LR7 162 aa12.82□□□□□ -0.36
TPM3-220ENST00000509601 RNF126Q9BV68 326 aa12.82□□□□□ -0.36
TPM3-220ENST00000509601 ARV1Q9H2C2 271 aa12.82□□□□□ -0.36
TPM3-220ENST00000509601 PLA2G2EQ9NZK7 142 aa12.82□□□□□ -0.36
TPM3-220ENST00000509601 LSM5Q9Y4Y9 91 aaKnown RBP12.82□□□□□ -0.36
TPM3-220ENST00000509601 RFNGQ9Y644 331 aa12.82□□□□□ -0.36
TPM3-220ENST00000509601 A0A087X0K7 114 aa12.81□□□□□ -0.36
TPM3-220ENST00000509601 TMEM189A5PLL7 270 aa12.81□□□□□ -0.36
TPM3-220ENST00000509601 FAM24AA6NFZ4 105 aa12.81□□□□□ -0.36
TPM3-220ENST00000509601 CRXO43186 299 aaPredicted RBP12.81□□□□□ -0.36
TPM3-220ENST00000509601 EMP1P54849 157 aa12.81□□□□□ -0.36
TPM3-220ENST00000509601 ZNF846Q147U1 533 aa12.81□□□□□ -0.36
TPM3-220ENST00000509601 OR11H7Q8NGC8 314 aa12.81□□□□□ -0.36
TPM3-220ENST00000509601 TMEM37Q8WXS4 190 aa12.81□□□□□ -0.36
TPM3-220ENST00000509601 MGST2Q99735 147 aa12.81□□□□□ -0.36
TPM3-220ENST00000509601 FAM240BA0A1B0GVZ2 78 aa12.8□□□□□ -0.36
TPM3-220ENST00000509601 C5orf51A6NDU8 294 aa12.8□□□□□ -0.36
TPM3-220ENST00000509601 L7N2F9 121 aa12.8□□□□□ -0.36
TPM3-220ENST00000509601 GOSR2O14653 212 aa12.8□□□□□ -0.36
TPM3-220ENST00000509601 DUSP14O95147 198 aaKnown RBP12.8□□□□□ -0.36
TPM3-220ENST00000509601 SPART-AS1P0CW21 52 aa12.8□□□□□ -0.36
TPM3-220ENST00000509601 CXCL3P19876 107 aa12.8□□□□□ -0.36
TPM3-220ENST00000509601 VAMP2P63027 116 aa12.8□□□□□ -0.36
TPM3-220ENST00000509601 PXDC1Q5TGL8 231 aa12.8□□□□□ -0.36
TPM3-220ENST00000509601 IGF2BP2-AS1Q96M15 143 aa12.8□□□□□ -0.36
TPM3-220ENST00000509601 DKK2Q9UBU2 259 aa12.8□□□□□ -0.36
TPM3-220ENST00000509601 GOLT1BQ9Y3E0 138 aa12.8□□□□□ -0.36
TPM3-220ENST00000509601 BCAP31P51572 246 aa12.79□□□□□ -0.36
TPM3-220ENST00000509601 PSG3Q16557 428 aa12.79□□□□□ -0.36
TPM3-220ENST00000509601 LINC00305Q7Z4B0 112 aa12.79□□□□□ -0.36
TPM3-220ENST00000509601 A6NHS1 94 aa12.78□□□□□ -0.36
TPM3-220ENST00000509601 CST7O76096 145 aa12.78□□□□□ -0.36
TPM3-220ENST00000509601 PRM2P04554 102 aa12.78□□□□□ -0.36
TPM3-220ENST00000509601 ASAH1Q13510 395 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 303.3 ms