RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 SLC35G3Q8N808 338 aa2.53□□□□□ -2
RNF4-211ENST00000509206 Q8N976 141 aa2.53□□□□□ -2
RNF4-211ENST00000509206 OR11H7Q8NGC8 314 aa2.53□□□□□ -2
RNF4-211ENST00000509206 OR1S2Q8NGQ3 325 aa2.53□□□□□ -2
RNF4-211ENST00000509206 OR10R2Q8NGX6 335 aa2.53□□□□□ -2
RNF4-211ENST00000509206 OR4X1Q8NH49 305 aa2.53□□□□□ -2
RNF4-211ENST00000509206 PHYHIPQ92561 330 aa2.53□□□□□ -2
RNF4-211ENST00000509206 BORCS5Q969J3 196 aa2.53□□□□□ -2
RNF4-211ENST00000509206 PAXXQ9BUH6 204 aa2.53□□□□□ -2
RNF4-211ENST00000509206 PDCD10Q9BUL8 212 aa2.53□□□□□ -2
RNF4-211ENST00000509206 PBDC1Q9BVG4 233 aa2.53□□□□□ -2
RNF4-211ENST00000509206 GABARAPL1Q9H0R8 117 aa2.53□□□□□ -2
RNF4-211ENST00000509206 IGKV1D-8A0A087WSZ0 117 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 TRGV1A0A0A0MS02 117 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 TRAV8-6A0A0B4J262 113 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 IGHV3-38A0A0C4DH36 116 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 FOXI3A8MTJ6 420 aaPredicted RBP2.52□□□□□ -2.01
RNF4-211ENST00000509206 IBA57-AS1B1ANH7 110 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 E5RGE8 158 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 BOLA2-SMG1P6H3BVE0 249 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 CRXO43186 299 aaPredicted RBP2.52□□□□□ -2.01
RNF4-211ENST00000509206 PRAF2O60831 178 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 PITX3O75364 302 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 IGHV3-53P01767 116 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 ALPLP05186 524 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 DTYMKP23919 212 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 F2RP25116 425 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 OR10J1P30954 320 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 MEOX2P50222 304 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 CLDN12P56749 244 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 YPEL3P61236 119 aaPredicted RBP2.52□□□□□ -2.01
RNF4-211ENST00000509206 HIST1H1AQ02539 215 aaPredicted RBP2.52□□□□□ -2.01
RNF4-211ENST00000509206 FGL1Q08830 312 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 EIF4EBP1Q13541 118 aaPredicted RBP2.52□□□□□ -2.01
RNF4-211ENST00000509206 MSMO1Q15800 293 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 SPINK9Q5DT21 86 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 PXDC1Q5TGL8 231 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 CST9LP1Q5W188 147 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 Q6ZS49 121 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 OR51G1Q8NGK1 321 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 FAM3DQ96BQ1 224 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 GPR146Q96CH1 333 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 URB1-AS1Q96HZ7 61 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 LINC01600Q96MT4 127 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 SLC25A39Q9BZJ4 359 aaPredicted RBP2.52□□□□□ -2.01
RNF4-211ENST00000509206 FGF20Q9NP95 211 aaPredicted RBP2.52□□□□□ -2.01
RNF4-211ENST00000509206 PRO0255Q9UI72 69 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 HHLA3Q9XRX5 114 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 LPAP08519 4548 aa2.52□□□□□ -2.01
RNF4-211ENST00000509206 TRGV4A0A0C4DH28 118 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 TCRBV3S1A0A5B6 114 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 TMEM235A6NFC5 223 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 SLC17A2O00624 439 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 MYL12BO14950 172 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 IGKV1-17P01599 117 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 IGHV3-30P01768 117 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 IGHV3-33P01772 117 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 OR5AC1P0C628 307 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 IGHV3-30-3P0DP02 117 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 IGHV3-30-5P0DP03 117 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 SLC25A4P12235 298 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 FCGR1AP12314 374 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 HIST1H1DP16402 221 aaKnown RBP2.51□□□□□ -2.01
RNF4-211ENST00000509206 PSMB9P28065 219 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 S100GP29377 79 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 GALR1P47211 349 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 RFX2P48378 723 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 PPT1P50897 306 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 RND2P52198 227 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 WNT4P56705 351 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 GNG2P59768 71 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 HERV-K104P61576 105 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 PSG3Q16557 428 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 CTF1Q16619 201 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 CDNFQ49AH0 187 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 OR10J3Q5JRS4 329 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 ETFRF1Q6IPR1 90 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 AMTNQ6UX39 209 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 C9orf47Q6ZRZ4 202 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 Q6ZTI0 123 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 TMEM17Q86X19 198 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 MS4A15Q8N5U1 240 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 LINC00612Q8N6U2 182 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 ZNF738Q8NE65 137 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 RHOXF1Q8NHV9 184 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 LRRC20Q8TCA0 184 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 RNASE8Q8TDE3 154 aaKnown RBP2.51□□□□□ -2.01
RNF4-211ENST00000509206 FCAMRQ8WWV6 532 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 BAALCQ8WXS3 180 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 RPL36ALQ969Q0 106 aaKnown RBP2.51□□□□□ -2.01
RNF4-211ENST00000509206 CENPNQ96H22 339 aaPredicted RBP2.51□□□□□ -2.01
RNF4-211ENST00000509206 TMEM80Q96HE8 168 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 TXNDC17Q9BRA2 123 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 RSG1Q9BU20 258 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 RBM38Q9H0Z9 239 aaKnown RBP2.51□□□□□ -2.01
RNF4-211ENST00000509206 ATG5Q9H1Y0 275 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 ANXA10Q9UJ72 324 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 RPH3ALQ9UNE2 315 aa2.51□□□□□ -2.01
RNF4-211ENST00000509206 DIMT1Q9UNQ2 313 aaKnown RBP2.51□□□□□ -2.01
RNF4-211ENST00000509206 FUT9Q9Y231 359 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms