RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 SSX7Q7RTT5 188 aa11.16□□□□□ -0.62
CXCL1-202ENST00000509101 KRTAP1-5Q9BYS1 174 aa11.16□□□□□ -0.62
CXCL1-202ENST00000509101 SLC25A32Q9H2D1 315 aa11.16□□□□□ -0.62
CXCL1-202ENST00000509101 RBKSQ9H477 322 aa11.16□□□□□ -0.62
CXCL1-202ENST00000509101 SLC25A22Q9H936 323 aa11.16□□□□□ -0.62
CXCL1-202ENST00000509101 NDUFA13Q9P0J0 144 aa11.16□□□□□ -0.62
CXCL1-202ENST00000509101 CRYM-AS1A6NIL9 109 aa11.15□□□□□ -0.62
CXCL1-202ENST00000509101 AZU1P20160 251 aa11.15□□□□□ -0.62
CXCL1-202ENST00000509101 TSPOP30536 169 aa11.15□□□□□ -0.62
CXCL1-202ENST00000509101 GALR1P47211 349 aa11.15□□□□□ -0.62
CXCL1-202ENST00000509101 BAK1Q16611 211 aa11.15□□□□□ -0.62
CXCL1-202ENST00000509101 TOMM5Q8N4H5 51 aa11.15□□□□□ -0.62
CXCL1-202ENST00000509101 SDHCQ99643 169 aaPredicted RBP11.15□□□□□ -0.62
CXCL1-202ENST00000509101 HSPB7Q9UBY9 170 aa11.15□□□□□ -0.62
CXCL1-202ENST00000509101 CACFD1Q9UGQ2 172 aa11.15□□□□□ -0.62
CXCL1-202ENST00000509101 SCP2D1Q9UJQ7 156 aa11.15□□□□□ -0.62
CXCL1-202ENST00000509101 TMEM56-RWDD3S4R434 201 aa11.15□□□□□ -0.62
CXCL1-202ENST00000509101 SNRPGP15A8MWD9 76 aa11.14□□□□□ -0.63
CXCL1-202ENST00000509101 GPX4P36969 197 aaPredicted RBP11.14□□□□□ -0.63
CXCL1-202ENST00000509101 SPANXN2Q5MJ10 180 aa11.14□□□□□ -0.63
CXCL1-202ENST00000509101 C17orf77Q96MU5 243 aa11.14□□□□□ -0.63
CXCL1-202ENST00000509101 RSG1Q9BU20 258 aa11.14□□□□□ -0.63
CXCL1-202ENST00000509101 Q9H8V8 135 aa11.14□□□□□ -0.63
CXCL1-202ENST00000509101 TRAV12-2A0A075B6T6 113 aa11.13□□□□□ -0.63
CXCL1-202ENST00000509101 CBY3A6NI87 242 aa11.13□□□□□ -0.63
CXCL1-202ENST00000509101 DUSP14O95147 198 aaKnown RBP11.13□□□□□ -0.63
CXCL1-202ENST00000509101 B2MP61769 119 aa11.13□□□□□ -0.63
CXCL1-202ENST00000509101 SMCO1Q147U7 214 aa11.13□□□□□ -0.63
CXCL1-202ENST00000509101 TTC32Q5I0X7 151 aa11.13□□□□□ -0.63
CXCL1-202ENST00000509101 IGFL4Q6B9Z1 124 aa11.13□□□□□ -0.63
CXCL1-202ENST00000509101 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.13□□□□□ -0.63
CXCL1-202ENST00000509101 RNF182Q8N6D2 247 aa11.13□□□□□ -0.63
CXCL1-202ENST00000509101 TRGV9Q99603 122 aa11.13□□□□□ -0.63
CXCL1-202ENST00000509101 SLC25A39Q9BZJ4 359 aaPredicted RBP11.13□□□□□ -0.63
CXCL1-202ENST00000509101 IGKV1OR2-108A0A075B7D4 117 aa11.12□□□□□ -0.63
CXCL1-202ENST00000509101 EPM2AB3EWF7 344 aa11.12□□□□□ -0.63
CXCL1-202ENST00000509101 CCR6P51684 374 aa11.12□□□□□ -0.63
CXCL1-202ENST00000509101 DLK1P80370 383 aa11.12□□□□□ -0.63
CXCL1-202ENST00000509101 IL22RA2Q969J5 263 aa11.12□□□□□ -0.63
CXCL1-202ENST00000509101 UHRF2Q96PU4 802 aa11.12□□□□□ -0.63
CXCL1-202ENST00000509101 ZNF98A6NK75 572 aa11.11□□□□□ -0.63
CXCL1-202ENST00000509101 BOLA2-SMG1P6H3BVE0 249 aa11.11□□□□□ -0.63
CXCL1-202ENST00000509101 AKR1C4P17516 323 aa11.11□□□□□ -0.63
CXCL1-202ENST00000509101 FAUP35544 74 aaKnown RBP11.11□□□□□ -0.63
CXCL1-202ENST00000509101 AP3S2P59780 193 aa11.11□□□□□ -0.63
CXCL1-202ENST00000509101 LINC01587Q99440 93 aa11.11□□□□□ -0.63
CXCL1-202ENST00000509101 Q9H3A6 140 aa11.11□□□□□ -0.63
CXCL1-202ENST00000509101 FAT1Q14517 4588 aa11.1□□□□□ -0.63
CXCL1-202ENST00000509101 TRAV8-2A0A0B4J237 113 aa11.1□□□□□ -0.63
CXCL1-202ENST00000509101 A6NHS1 94 aa11.1□□□□□ -0.63
CXCL1-202ENST00000509101 HTN1P15515 57 aa11.1□□□□□ -0.63
CXCL1-202ENST00000509101 FGL1Q08830 312 aa11.1□□□□□ -0.63
CXCL1-202ENST00000509101 LYZL2Q7Z4W2 148 aa11.1□□□□□ -0.63
CXCL1-202ENST00000509101 THAP8Q8NA92 274 aa11.1□□□□□ -0.63
CXCL1-202ENST00000509101 ZNF738Q8NE65 137 aa11.1□□□□□ -0.63
CXCL1-202ENST00000509101 OR1B1Q8NGR6 318 aa11.1□□□□□ -0.63
CXCL1-202ENST00000509101 OR1S1Q8NH92 325 aa11.1□□□□□ -0.63
CXCL1-202ENST00000509101 SCGB3A2Q96PL1 93 aa11.1□□□□□ -0.63
CXCL1-202ENST00000509101 PAIP2BQ9ULR5 123 aaKnown RBP11.1□□□□□ -0.63
CXCL1-202ENST00000509101 LINC00854A0A1B0GVQ3 168 aa11.09□□□□□ -0.63
CXCL1-202ENST00000509101 IAPPP10997 89 aa11.09□□□□□ -0.63
CXCL1-202ENST00000509101 BTF3P20290 206 aaKnown RBP11.09□□□□□ -0.63
CXCL1-202ENST00000509101 ATP5IP56385 69 aaPredicted RBP11.09□□□□□ -0.63
CXCL1-202ENST00000509101 HIST1H1AQ02539 215 aaPredicted RBP11.09□□□□□ -0.63
CXCL1-202ENST00000509101 TMED4Q7Z7H5 227 aa11.09□□□□□ -0.63
CXCL1-202ENST00000509101 GNPNAT1Q96EK6 184 aaPredicted RBP11.09□□□□□ -0.63
CXCL1-202ENST00000509101 C16orf74Q96GX8 76 aa11.09□□□□□ -0.63
CXCL1-202ENST00000509101 SLC45A2Q9UMX9 530 aa11.09□□□□□ -0.63
CXCL1-202ENST00000509101 KCNIP3Q9Y2W7 256 aa11.09□□□□□ -0.63
CXCL1-202ENST00000509101 TIMM8BQ9Y5J9 83 aaPredicted RBP11.09□□□□□ -0.63
CXCL1-202ENST00000509101 MYCBP2O75592 4640 aa11.08□□□□□ -0.63
CXCL1-202ENST00000509101 TRAV26-1A0A087WT03 109 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 A0A0B4J2A0 478 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 A0A0J9YY99 117 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 INAFM2P0DMQ5 153 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 PRB4P10163 310 aaPredicted RBP11.08□□□□□ -0.64
CXCL1-202ENST00000509101 ORM2P19652 201 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 GATA2P23769 480 aaPredicted RBP11.08□□□□□ -0.64
CXCL1-202ENST00000509101 TAS2R60P59551 318 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 RAB11AP62491 216 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 RHOBP62745 196 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 OR5I1Q13606 314 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 GGNBP1Q5YKI7 109 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 TRIQKQ629K1 86 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 TMEM256Q8N2U0 113 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 OR4D5Q8NGN0 318 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 GPR82Q96P67 336 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 NOP10Q9NPE3 64 aaKnown RBP11.08□□□□□ -0.64
CXCL1-202ENST00000509101 ZNF586Q9NXT0 402 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 SHPKQ9UHJ6 478 aa11.08□□□□□ -0.64
CXCL1-202ENST00000509101 VPS13BQ7Z7G8 4022 aa11.07□□□□□ -0.64
CXCL1-202ENST00000509101 CFDP00746 253 aaPredicted RBP11.07□□□□□ -0.64
CXCL1-202ENST00000509101 IL7P13232 177 aa11.07□□□□□ -0.64
CXCL1-202ENST00000509101 BTCP35070 178 aa11.07□□□□□ -0.64
CXCL1-202ENST00000509101 CNPY1Q3B7I2 92 aa11.07□□□□□ -0.64
CXCL1-202ENST00000509101 TMEM144Q7Z5S9 345 aa11.07□□□□□ -0.64
CXCL1-202ENST00000509101 BPIFCQ8NFQ6 507 aa11.07□□□□□ -0.64
CXCL1-202ENST00000509101 DEDD2Q8WXF8 326 aa11.07□□□□□ -0.64
CXCL1-202ENST00000509101 UPK3BQ9BT76 320 aa11.07□□□□□ -0.64
CXCL1-202ENST00000509101 TMEM147Q9BVK8 224 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms