RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 TMEM128Q5BJH2 165 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 SPATA31B1PQ5VZV4 182 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 IGFL4Q6B9Z1 124 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 OR8I2Q8N0Y5 310 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 RNF182Q8N6D2 247 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 SLC35E1Q96K37 410 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 FAM210BQ96KR6 192 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 SCGB3A2Q96PL1 93 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 NIPSNAP3BQ9BS92 247 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 RSG1Q9BU20 258 aa4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 YTHDF2Q9Y5A9 579 aaKnown RBP4.54□□□□□ -1.68
HMGN1P16-201ENST00000508308 LOC102723971A0A1B0GUV8 181 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 DUXBA0A1W2PPF3 345 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 PMS2P5A8MQ11 134 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 SYNGR2O43760 224 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 MED14OSP0DP75 135 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 PRB4P10163 310 aaPredicted RBP4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 ANXA3P12429 323 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 AZU1P20160 251 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 CNN1P51911 297 aaKnown RBP4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 PPP1R1AQ13522 171 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 RNF212Q495C1 297 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 TMEM88Q6PEY1 159 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 TMED4Q7Z7H5 227 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 CENPSQ8N2Z9 138 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 OR11H7Q8NGC8 314 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 MCFD2Q8NI22 146 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 COQ8AQ8NI60 647 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 IGF2BP2-AS1Q96M15 143 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 BCL7BQ9BQE9 202 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 RPRMQ9NS64 109 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 DOK5Q9P104 306 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 SLC45A2Q9UMX9 530 aa4.53□□□□□ -1.68
HMGN1P16-201ENST00000508308 FAT1Q14517 4588 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 ZNF705GA8MUZ8 300 aaPredicted RBP4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 H3BP45 60 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 M0R2Z0 102 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 WRBO00258 174 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 MRPS12O15235 138 aaKnown RBP4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 ADAP1O75689 374 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 CCNKO75909 580 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 SFT2D2O95562 160 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 HBE1P02100 147 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 FABP1P07148 127 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 HOXB5P09067 269 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 HTN3P15516 51 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 ORM2P19652 201 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 VAMP1P23763 118 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 MEOX2P50222 304 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 RAB11AP62491 216 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 ID3Q02535 119 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 SPINK13Q1W4C9 94 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 RRN3P1Q2M238 152 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 GGNBP1Q5YKI7 109 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 EBLN2Q6P2I7 272 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 PATE2Q6UY27 113 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 ACOT7LQ6ZUV0 252 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 CCDC190Q86UF4 302 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 ZNF575Q86XF7 245 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 BAP18Q8IXM2 172 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 OR4D5Q8NGN0 318 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 PPP1R14BQ96C90 147 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 C16orf92Q96LL3 132 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 SLC25A22Q9H936 323 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 PFDN2Q9UHV9 154 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 PAIP2BQ9ULR5 123 aaKnown RBP4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 GOLT1BQ9Y3E0 138 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 TMED3Q9Y3Q3 217 aa4.52□□□□□ -1.69
HMGN1P16-201ENST00000508308 HERC1Q15751 4861 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 TRAV12-2A0A075B6T6 113 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 TEX48A0A1B0GUV7 120 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 H3BRN7 92 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 CFDP00746 253 aaPredicted RBP4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 IFNA21P01568 189 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 GALR1P47211 349 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 DAD1P61803 113 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 POLR2GP62487 172 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 FCN2Q15485 313 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 PYDC2Q56P42 97 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 SPANXN5Q5MJ07 72 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 SAMD13Q5VXD3 122 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 TMEM144Q7Z5S9 345 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 TOMM5Q8N4H5 51 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 BPIFCQ8NFQ6 507 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 OR1B1Q8NGR6 318 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 UHRF2Q96PU4 802 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 CIB3Q96Q77 187 aaPredicted RBP4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 SLC25A21Q9BQT8 299 aaPredicted RBP4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 C7orf50Q9BRJ6 194 aaKnown RBP4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 SHANK2-AS3Q9BTD1 123 aa4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 SLC25A39Q9BZJ4 359 aaPredicted RBP4.51□□□□□ -1.69
HMGN1P16-201ENST00000508308 C9orf170A2RU37 121 aa4.5□□□□□ -1.69
HMGN1P16-201ENST00000508308 LYRM9A8MSI8 78 aa4.5□□□□□ -1.69
HMGN1P16-201ENST00000508308 MED6O75586 246 aa4.5□□□□□ -1.69
HMGN1P16-201ENST00000508308 CXCL3P19876 107 aa4.5□□□□□ -1.69
HMGN1P16-201ENST00000508308 TSPOP30536 169 aa4.5□□□□□ -1.69
HMGN1P16-201ENST00000508308 FAUP35544 74 aaKnown RBP4.5□□□□□ -1.69
HMGN1P16-201ENST00000508308 PLP1P60201 277 aa4.5□□□□□ -1.69
HMGN1P16-201ENST00000508308 AKR1C1Q04828 323 aa4.5□□□□□ -1.69
HMGN1P16-201ENST00000508308 ARL16Q0P5N6 197 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms