RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 SRSF12Q8WXF0 261 aaKnown RBP10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 C17orf77Q96MU5 243 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 OTORQ9NRC9 128 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 SPAARA0A1B0GVQ0 90 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 FAM231BA6NCW3 169 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 KLK10O43240 276 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 ARF6P62330 175 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 SAPCD1Q5SSQ6 148 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 LINC01545Q5VT33 79 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 C16orf54Q6UWD8 224 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 C12orf54Q6X4T0 127 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 WFDC8Q8IUA0 241 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 SLC25A39Q9BZJ4 359 aaPredicted RBP10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 HSPB8Q9UJY1 196 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 ATMQ13315 3056 aa10.67□□□□□ -0.7
SNCAIP-209ENST00000508017 HLA-DRB1P01911 266 aa10.66□□□□□ -0.7
SNCAIP-209ENST00000508017 FAM106CPP0CH98 169 aa10.66□□□□□ -0.7
SNCAIP-209ENST00000508017 PLP1P60201 277 aa10.66□□□□□ -0.7
SNCAIP-209ENST00000508017 FAM106AQ4KMX7 169 aa10.66□□□□□ -0.7
SNCAIP-209ENST00000508017 C2orf91Q6ZV80 131 aa10.66□□□□□ -0.7
SNCAIP-209ENST00000508017 NUP37Q8NFH4 326 aa10.66□□□□□ -0.7
SNCAIP-209ENST00000508017 A0A1B0GUT8 65 aa10.66□□□□□ -0.7
SNCAIP-209ENST00000508017 M0R296 226 aa10.66□□□□□ -0.7
SNCAIP-209ENST00000508017 IGLC1P0CG04 106 aa10.66□□□□□ -0.7
SNCAIP-209ENST00000508017 MC5RP33032 325 aa10.66□□□□□ -0.7
SNCAIP-209ENST00000508017 PSG9Q00887 426 aa10.66□□□□□ -0.7
SNCAIP-209ENST00000508017 CST9LQ9H4G1 147 aa10.66□□□□□ -0.7
SNCAIP-209ENST00000508017 TRAV8-6A0A0B4J262 113 aa10.65□□□□□ -0.7
SNCAIP-209ENST00000508017 IGHV1-8P0DP01 117 aa10.65□□□□□ -0.7
SNCAIP-209ENST00000508017 HOXB4P17483 251 aaPredicted RBP10.65□□□□□ -0.7
SNCAIP-209ENST00000508017 LGALS7P47929 136 aa10.65□□□□□ -0.7
SNCAIP-209ENST00000508017 C8orf31Q8N9H6 132 aa10.65□□□□□ -0.7
SNCAIP-209ENST00000508017 PRSS33Q8NF86 280 aa10.65□□□□□ -0.7
SNCAIP-209ENST00000508017 TPPP3Q9BW30 176 aa10.65□□□□□ -0.7
SNCAIP-209ENST00000508017 MS4A6AQ9H2W1 248 aa10.65□□□□□ -0.7
SNCAIP-209ENST00000508017 CSMD1Q96PZ7 3565 aa10.65□□□□□ -0.71
SNCAIP-209ENST00000508017 TEX22C9J3V5 150 aa10.65□□□□□ -0.71
SNCAIP-209ENST00000508017 TNFRSF13BO14836 293 aaPredicted RBP10.65□□□□□ -0.71
SNCAIP-209ENST00000508017 CRYGBP07316 175 aa10.65□□□□□ -0.71
SNCAIP-209ENST00000508017 GPR183P32249 361 aa10.65□□□□□ -0.71
SNCAIP-209ENST00000508017 HIST1H1AQ02539 215 aaPredicted RBP10.65□□□□□ -0.71
SNCAIP-209ENST00000508017 DEFB124Q8NES8 71 aa10.65□□□□□ -0.71
SNCAIP-209ENST00000508017 ZNF747Q9BV97 191 aa10.65□□□□□ -0.71
SNCAIP-209ENST00000508017 AP5S1Q9NUS5 200 aa10.65□□□□□ -0.71
SNCAIP-209ENST00000508017 SIGLEC9Q9Y336 463 aa10.65□□□□□ -0.71
SNCAIP-209ENST00000508017 F11RQ9Y624 299 aaKnown RBP10.65□□□□□ -0.71
SNCAIP-209ENST00000508017 BSNQ9UPA5 3926 aa10.64□□□□□ -0.71
SNCAIP-209ENST00000508017 RBP4P02753 201 aa10.64□□□□□ -0.71
SNCAIP-209ENST00000508017 LOXL1Q08397 574 aaPredicted RBP10.64□□□□□ -0.71
SNCAIP-209ENST00000508017 TMEM155Q4W5P6 130 aa10.64□□□□□ -0.71
SNCAIP-209ENST00000508017 TMEM108Q6UXF1 575 aa10.64□□□□□ -0.71
SNCAIP-209ENST00000508017 DEFB123Q8N688 67 aa10.64□□□□□ -0.71
SNCAIP-209ENST00000508017 CD5LO43866 347 aa10.64□□□□□ -0.71
SNCAIP-209ENST00000508017 CEACAM4O75871 244 aa10.64□□□□□ -0.71
SNCAIP-209ENST00000508017 COX8AP10176 69 aa10.64□□□□□ -0.71
SNCAIP-209ENST00000508017 CRIP1P50238 77 aa10.64□□□□□ -0.71
SNCAIP-209ENST00000508017 BSPH1Q075Z2 132 aa10.64□□□□□ -0.71
SNCAIP-209ENST00000508017 OCIAD2Q56VL3 154 aa10.64□□□□□ -0.71
SNCAIP-209ENST00000508017 CACNA1HO95180 2353 aa10.63□□□□□ -0.71
SNCAIP-209ENST00000508017 K7EM74 188 aa10.63□□□□□ -0.71
SNCAIP-209ENST00000508017 FTH1P19P0C7X4 201 aa10.63□□□□□ -0.71
SNCAIP-209ENST00000508017 TCTAP57738 103 aa10.63□□□□□ -0.71
SNCAIP-209ENST00000508017 TMEM133Q9H2Q1 129 aa10.63□□□□□ -0.71
SNCAIP-209ENST00000508017 FBXL15Q9H469 300 aa10.63□□□□□ -0.71
SNCAIP-209ENST00000508017 TMEM14CQ9P0S9 112 aa10.63□□□□□ -0.71
SNCAIP-209ENST00000508017 AKAP13Q12802 2813 aa10.63□□□□□ -0.71
SNCAIP-209ENST00000508017 RIGQ13278 110 aa10.63□□□□□ -0.71
SNCAIP-209ENST00000508017 COTL1Q14019 142 aa10.63□□□□□ -0.71
SNCAIP-209ENST00000508017 FA2HQ7L5A8 372 aa10.63□□□□□ -0.71
SNCAIP-209ENST00000508017 PIP4P2Q8N4L2 257 aa10.63□□□□□ -0.71
SNCAIP-209ENST00000508017 PRSS3P2Q8NHM4 247 aa10.63□□□□□ -0.71
SNCAIP-209ENST00000508017 ZGRF1Q86YA3 2104 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 A0A096LNJ9 63 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 LOC389332A0A1B0GUA5 103 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 I3L2K1 104 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 IGKV1-17P01599 117 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 IFI27P40305 119 aaPredicted RBP10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 RASL11BQ9BPW5 248 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 TPRP12270 2363 aaKnown RBP10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 TRBV19A0A075B6N1 114 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 M0R3E3 92 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 PPBPP02775 128 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 FXYD7P58549 80 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 PPP1R27Q86WC6 154 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 OR8A1Q8NGG7 326 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 C8orf49Q96NF6 230 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 VPS25Q9BRG1 176 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 NGBQ9NPG2 151 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 PSG8Q9UQ74 426 aa10.62□□□□□ -0.71
SNCAIP-209ENST00000508017 THBDP07204 575 aa10.61□□□□□ -0.71
SNCAIP-209ENST00000508017 UQCRFS1P47985 274 aa10.61□□□□□ -0.71
SNCAIP-209ENST00000508017 RPS20P60866 119 aaKnown RBP10.61□□□□□ -0.71
SNCAIP-209ENST00000508017 SIGLEC15Q6ZMC9 328 aa10.61□□□□□ -0.71
SNCAIP-209ENST00000508017 BPIFA4PQ86YQ2 179 aa10.61□□□□□ -0.71
SNCAIP-209ENST00000508017 OR10AG1Q8NH19 301 aa10.61□□□□□ -0.71
SNCAIP-209ENST00000508017 SELENOKQ9Y6D0 94 aa10.61□□□□□ -0.71
SNCAIP-209ENST00000508017 DCHS2Q6V1P9 2916 aa10.61□□□□□ -0.71
SNCAIP-209ENST00000508017 TMSB15BA0A087X1C1 80 aa10.6□□□□□ -0.71
SNCAIP-209ENST00000508017 IGHV1-3A0A0C4DH29 117 aa10.6□□□□□ -0.71
SNCAIP-209ENST00000508017 C7orf71A4D174 169 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms