RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 OPCMLQ14982 345 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 ODF3L2Q3SX64 289 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 PXDC1Q5TGL8 231 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 MORN5Q5VZ52 161 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 LEMD1Q68G75 181 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 LINC00322Q6ZN03 302 aaPredicted RBP4.25□□□□□ -1.73
USP46-206ENST00000506707 GTSCR1Q86UQ5 136 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 FAM24BQ8N5W8 94 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 DEFB125Q8N687 156 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 OR11H4Q8NGC9 324 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 GRAMD2BQ96HH9 432 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 UHRF2Q96PU4 802 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 CITED4Q96RK1 184 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 FAM110AQ9BQ89 295 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 SHANK2-AS3Q9BTD1 123 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 NPCDR1Q9BY65 106 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 SLC25A39Q9BZJ4 359 aaPredicted RBP4.25□□□□□ -1.73
USP46-206ENST00000506707 SMIM3Q9BZL3 60 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 WFDC10AQ9H1F0 79 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 ARV1Q9H2C2 271 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 DNAJC4Q9NNZ3 241 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 SLC39A9Q9NUM3 307 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 PFDN2Q9UHV9 154 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 TNFSF18Q9UNG2 199 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 RFNGQ9Y644 331 aa4.25□□□□□ -1.73
USP46-206ENST00000506707 PRKDCP78527 4128 aaKnown RBP4.24□□□□□ -1.73
USP46-206ENST00000506707 FXYD6-FXYD2A0A087WZ82 144 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 TRAV2A0A0B4J234 112 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 A0A1B0GVG6 124 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 RBMY1BA6NDE4 496 aaKnown RBP4.24□□□□□ -1.73
USP46-206ENST00000506707 RBMY1EA6NEQ0 496 aaKnown RBP4.24□□□□□ -1.73
USP46-206ENST00000506707 H3BRN7 92 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 DNASE2O00115 360 aaPredicted RBP4.24□□□□□ -1.73
USP46-206ENST00000506707 MRPS12O15235 138 aaKnown RBP4.24□□□□□ -1.73
USP46-206ENST00000506707 OR5G3P0C626 314 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 RBMY1DP0C7P1 496 aaKnown RBP4.24□□□□□ -1.73
USP46-206ENST00000506707 NUP62P37198 522 aaPredicted RBP4.24□□□□□ -1.73
USP46-206ENST00000506707 B2MP61769 119 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 GCSAMLQ5JQS6 135 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 SIGLEC15Q6ZMC9 328 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 Q6ZRG5 221 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 LINC00305Q7Z4B0 112 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 OR8I2Q8N0Y5 310 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 INO80EQ8NBZ0 244 aaPredicted RBP4.24□□□□□ -1.73
USP46-206ENST00000506707 RSG1Q9BU20 258 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 SCRT1Q9BWW7 348 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 PARD6GQ9BYG4 376 aaPredicted RBP4.24□□□□□ -1.73
USP46-206ENST00000506707 SLC25A32Q9H2D1 315 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 SLC25A22Q9H936 323 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 FBXL17Q9UF56 701 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 UBQLN2Q9UHD9 624 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 HIGD1AQ9Y241 93 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 PXMP4Q9Y6I8 212 aa4.24□□□□□ -1.73
USP46-206ENST00000506707 hCG_2014768A0A024R1R8 64 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 TRAV5A0A0B4J249 113 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 HMSDA8MTL9 139 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 SOCS3O14543 225 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 EREGO14944 169 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 ARPC5O15511 151 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 IFNA5P01569 189 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 FRMD6-AS1P0C7T7 363 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 CMC4P56277 68 aaPredicted RBP4.23□□□□□ -1.73
USP46-206ENST00000506707 C10orf113Q5VZT2 155 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 APRG1Q8IVJ8 170 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 SBSPONQ8IVN8 264 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 STXBP6Q8NFX7 210 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 OR1L4Q8NGR5 311 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 SCGB1C1Q8TD33 95 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 GATAD1Q8WUU5 269 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 PPP1R14BQ96C90 147 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 GPR82Q96P67 336 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 B9D2Q9BPU9 175 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 MFFQ9GZY8 342 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 TUBA4BQ9H853 241 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 MAP6D1Q9H9H5 199 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 SEPSECSQ9HD40 501 aaKnown RBP4.23□□□□□ -1.73
USP46-206ENST00000506707 NRN1Q9NPD7 142 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 CYTL1Q9NRR1 136 aa4.23□□□□□ -1.73
USP46-206ENST00000506707 SORL1Q92673 2214 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 DNAH9Q9NYC9 4486 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 C17orf112F2Z3M2 114 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 COX7A2P2O60397 106 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 ZNF688P0C7X2 276 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 RPL7P18124 248 aaKnown RBP4.22□□□□□ -1.73
USP46-206ENST00000506707 CXCL2P19875 107 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 S100A7P31151 101 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 GALR1P47211 349 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 DEFB131AP59861 70 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 CD300CQ08708 224 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 ZNF266Q14584 549 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 FAM78BQ5VT40 261 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 RPL7L1Q6DKI1 246 aaKnown RBP4.22□□□□□ -1.73
USP46-206ENST00000506707 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 S100A7AQ86SG5 101 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 TCTE3Q8IZS6 198 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 KCNRGQ8N5I3 272 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 ZNF709Q8N972 641 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 SAT2Q96F10 170 aaPredicted RBP4.22□□□□□ -1.73
USP46-206ENST00000506707 FAM167A-AS1Q96KT0 104 aa4.22□□□□□ -1.73
USP46-206ENST00000506707 PFDN5Q99471 154 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms